RNA–Protein interactions for RNA: ENST00000429035.1

SDC1-204, Transcript of syndecan 1, humanhuman

TSL 3

Gene SDC1, Length 646 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-204ENST00000429035 HYOU1Q9Y4L1 999 aa14.3□□□□□ -0.12
SDC1-204ENST00000429035 DOPEY2Q9Y3R5 2298 aa14.29□□□□□ -0.12
SDC1-204ENST00000429035 A0A0A6YYK5 440 aaPredicted RBP14.29□□□□□ -0.12
SDC1-204ENST00000429035 OR52A4PA6NMU1 304 aa14.29□□□□□ -0.12
SDC1-204ENST00000429035 CDK14O94921 469 aa14.29□□□□□ -0.12
SDC1-204ENST00000429035 DLGAP3O95886 979 aa14.29□□□□□ -0.12
SDC1-204ENST00000429035 TPM1P09493 284 aa14.29□□□□□ -0.12
SDC1-204ENST00000429035 ZFXP17010 805 aaPredicted RBP14.29□□□□□ -0.12
SDC1-204ENST00000429035 ZNF7P17097 686 aaPredicted RBP14.29□□□□□ -0.12
SDC1-204ENST00000429035 BPIP17213 487 aa14.29□□□□□ -0.12
SDC1-204ENST00000429035 TCN2P20062 427 aa14.29□□□□□ -0.12
SDC1-204ENST00000429035 TNNT3P45378 269 aaPredicted RBP14.29□□□□□ -0.12
SDC1-204ENST00000429035 LEPRP48357 1165 aaKnown RBP14.29□□□□□ -0.12
SDC1-204ENST00000429035 DRG2P55039 364 aaKnown RBP14.29□□□□□ -0.12
SDC1-204ENST00000429035 SH3BP2P78314 561 aa14.29□□□□□ -0.12
SDC1-204ENST00000429035 ABHD18Q0P651 414 aa14.29□□□□□ -0.12
SDC1-204ENST00000429035 NOMO1Q15155 1222 aa14.29□□□□□ -0.12
SDC1-204ENST00000429035 LLGL1Q15334 1064 aa14.29□□□□□ -0.12
SDC1-204ENST00000429035 COLEC12Q5KU26 742 aa14.29□□□□□ -0.12
SDC1-204ENST00000429035 KAZNQ674X7 775 aa14.29□□□□□ -0.12
SDC1-204ENST00000429035 PDPK2PQ6A1A2 396 aa14.29□□□□□ -0.12
SDC1-204ENST00000429035 SLC9A4Q6AI14 798 aa14.29□□□□□ -0.12
SDC1-204ENST00000429035 IRGCQ6NXR0 463 aa14.29□□□□□ -0.12
SDC1-204ENST00000429035 ESX1Q8N693 406 aa14.29□□□□□ -0.12
SDC1-204ENST00000429035 SLC35G2Q8TBE7 412 aa14.29□□□□□ -0.12
SDC1-204ENST00000429035 RSC1A1Q92681 617 aa14.29□□□□□ -0.12
SDC1-204ENST00000429035 STAMBPL1Q96FJ0 436 aa14.29□□□□□ -0.12
SDC1-204ENST00000429035 C9orf72Q96LT7 481 aa14.29□□□□□ -0.12
SDC1-204ENST00000429035 OR6C1Q96RD1 312 aa14.29□□□□□ -0.12
SDC1-204ENST00000429035 TIMM29Q9BSF4 260 aa14.29□□□□□ -0.12
SDC1-204ENST00000429035 SLC25A51Q9H1U9 297 aa14.29□□□□□ -0.12
SDC1-204ENST00000429035 EPN3Q9H201 632 aa14.29□□□□□ -0.12
SDC1-204ENST00000429035 TRIT1Q9H3H1 467 aaKnown RBP14.29□□□□□ -0.12
SDC1-204ENST00000429035 FBXO8Q9NRD0 319 aa14.29□□□□□ -0.12
SDC1-204ENST00000429035 SIDT1Q9NXL6 827 aaKnown RBP14.29□□□□□ -0.12
SDC1-204ENST00000429035 OGFRQ9NZT2 677 aa14.29□□□□□ -0.12
SDC1-204ENST00000429035 LNPEPQ9UIQ6 1025 aa14.29□□□□□ -0.12
SDC1-204ENST00000429035 TMEM184BQ9Y519 407 aaPredicted RBP14.29□□□□□ -0.12
SDC1-204ENST00000429035 SPO11Q9Y5K1 396 aa14.29□□□□□ -0.12
SDC1-204ENST00000429035 ADGRG1Q9Y653 693 aa14.29□□□□□ -0.12
SDC1-204ENST00000429035 RPS6KL1Q9Y6S9 549 aa14.29□□□□□ -0.12
SDC1-204ENST00000429035 CYSRT1A8MQ03 144 aa14.28□□□□□ -0.12
SDC1-204ENST00000429035 GPR89AB7ZAQ6 455 aa14.28□□□□□ -0.12
SDC1-204ENST00000429035 SPOPO43791 374 aa14.28□□□□□ -0.12
SDC1-204ENST00000429035 NDST3O95803 873 aa14.28□□□□□ -0.12
SDC1-204ENST00000429035 GPR89BP0CG08 455 aa14.28□□□□□ -0.12
SDC1-204ENST00000429035 ZNF28P17035 718 aa14.28□□□□□ -0.12
SDC1-204ENST00000429035 VCLP18206 1134 aa14.28□□□□□ -0.12
SDC1-204ENST00000429035 PBLDP30039 288 aaPredicted RBP14.28□□□□□ -0.12
SDC1-204ENST00000429035 DLSTP36957 453 aa14.28□□□□□ -0.12
SDC1-204ENST00000429035 SLC19A1P41440 591 aa14.28□□□□□ -0.12
SDC1-204ENST00000429035 STAT5AP42229 794 aa14.28□□□□□ -0.12
SDC1-204ENST00000429035 CLCNKAP51800 687 aa14.28□□□□□ -0.12
SDC1-204ENST00000429035 MC1RQ01726 317 aa14.28□□□□□ -0.12
SDC1-204ENST00000429035 TRIM14Q14142 442 aa14.28□□□□□ -0.12
SDC1-204ENST00000429035 KHDC1Q4VXA5 237 aaKnown RBP14.28□□□□□ -0.12
SDC1-204ENST00000429035 FAM92BQ6ZTR7 304 aa14.28□□□□□ -0.12
SDC1-204ENST00000429035 TMC3Q7Z5M5 1100 aa14.28□□□□□ -0.12
SDC1-204ENST00000429035 SLC25A41Q8N5S1 370 aa14.28□□□□□ -0.12
SDC1-204ENST00000429035 GALNT6Q8NCL4 622 aa14.28□□□□□ -0.12
SDC1-204ENST00000429035 OR8K1Q8NGG5 319 aa14.28□□□□□ -0.12
SDC1-204ENST00000429035 TTC25Q96NG3 672 aa14.28□□□□□ -0.12
SDC1-204ENST00000429035 OLFM3Q96PB7 478 aa14.28□□□□□ -0.12
SDC1-204ENST00000429035 GLOD4Q9HC38 313 aa14.28□□□□□ -0.12
SDC1-204ENST00000429035 MAGEE1Q9HCI5 957 aa14.28□□□□□ -0.12
SDC1-204ENST00000429035 POT1Q9NUX5 634 aa14.28□□□□□ -0.12
SDC1-204ENST00000429035 NFKBIL1Q9UBC1 381 aaPredicted RBP14.28□□□□□ -0.12
SDC1-204ENST00000429035 CROTQ9UKG9 612 aa14.28□□□□□ -0.12
SDC1-204ENST00000429035 SLC30A1Q9Y6M5 507 aa14.28□□□□□ -0.12
SDC1-204ENST00000429035 SSU72P8A0A1W2PR75 194 aa14.27□□□□□ -0.13
SDC1-204ENST00000429035 C3orf70A6NLC5 250 aaPredicted RBP14.27□□□□□ -0.13
SDC1-204ENST00000429035 AURKAO14965 403 aa14.27□□□□□ -0.13
SDC1-204ENST00000429035 CHUKO15111 745 aa14.27□□□□□ -0.13
SDC1-204ENST00000429035 CBFA2T2O43439 604 aa14.27□□□□□ -0.13
SDC1-204ENST00000429035 VEGFDO43915 354 aa14.27□□□□□ -0.13
SDC1-204ENST00000429035 KATNA1O75449 491 aa14.27□□□□□ -0.13
SDC1-204ENST00000429035 KIAA0754O94854 1291 aa14.27□□□□□ -0.13
SDC1-204ENST00000429035 NDUFA10O95299 355 aa14.27□□□□□ -0.13
SDC1-204ENST00000429035 ANKRD34CP0C6C1 535 aa14.27□□□□□ -0.13
SDC1-204ENST00000429035 IDSP22304 550 aa14.27□□□□□ -0.13
SDC1-204ENST00000429035 PTPN3P26045 913 aa14.27□□□□□ -0.13
SDC1-204ENST00000429035 HNRNPH3P31942 346 aaKnown RBP14.27□□□□□ -0.13
SDC1-204ENST00000429035 HALP42357 657 aa14.27□□□□□ -0.13
SDC1-204ENST00000429035 CAPZBP47756 277 aa14.27□□□□□ -0.13
SDC1-204ENST00000429035 SEPT6Q14141 434 aa14.27□□□□□ -0.13
SDC1-204ENST00000429035 GPR18Q14330 331 aa14.27□□□□□ -0.13
SDC1-204ENST00000429035 CACHD1Q5VU97 1274 aa14.27□□□□□ -0.13
SDC1-204ENST00000429035 FAM151BQ6UXP7 276 aa14.27□□□□□ -0.13
SDC1-204ENST00000429035 RHOT2Q8IXI1 618 aa14.27□□□□□ -0.13
SDC1-204ENST00000429035 TTC30BQ8N4P2 665 aa14.27□□□□□ -0.13
SDC1-204ENST00000429035 APOBEC4Q8WW27 367 aaKnown RBP14.27□□□□□ -0.13
SDC1-204ENST00000429035 HAUS1Q96CS2 278 aa14.27□□□□□ -0.13
SDC1-204ENST00000429035 KLHL8Q9P2G9 620 aaPredicted RBP14.27□□□□□ -0.13
SDC1-204ENST00000429035 ZNF624Q9P2J8 865 aaPredicted RBP14.27□□□□□ -0.13
SDC1-204ENST00000429035 TUBD1Q9UJT1 453 aa14.27□□□□□ -0.13
SDC1-204ENST00000429035 PCDHB3Q9Y5E6 796 aa14.27□□□□□ -0.13
SDC1-204ENST00000429035 HECTD1Q9ULT8 2610 aa14.26□□□□□ -0.13
SDC1-204ENST00000429035 ZNF487B1APH4 448 aa14.26□□□□□ -0.13
SDC1-204ENST00000429035 GPR39O43194 453 aa14.26□□□□□ -0.13
SDC1-204ENST00000429035 KIF1CO43896 1103 aaKnown RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms