RNA–Protein interactions for RNA: ENST00000428331.6

ATP2C1-204, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,795 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-204ENST00000428331 CGREF1Q99674 301 aa10.67□□□□□ -0.7
ATP2C1-204ENST00000428331 POLR1EQ9GZS1 481 aaKnown RBP10.67□□□□□ -0.7
ATP2C1-204ENST00000428331 TXNRD2Q9NNW7 524 aa10.67□□□□□ -0.7
ATP2C1-204ENST00000428331 PCDHB3Q9Y5E6 796 aa10.67□□□□□ -0.7
ATP2C1-204ENST00000428331 PCDHGA11Q9Y5H2 935 aa10.67□□□□□ -0.7
ATP2C1-204ENST00000428331 CPQQ9Y646 472 aa10.67□□□□□ -0.7
ATP2C1-204ENST00000428331 LRRC14BA6NHZ5 514 aa10.67□□□□□ -0.7
ATP2C1-204ENST00000428331 MYO1GB0I1T2 1018 aa10.67□□□□□ -0.7
ATP2C1-204ENST00000428331 E9PAM4 449 aa10.67□□□□□ -0.7
ATP2C1-204ENST00000428331 ANGPTL1O95841 491 aa10.67□□□□□ -0.7
ATP2C1-204ENST00000428331 ZNF37AP17032 561 aaPredicted RBP10.67□□□□□ -0.7
ATP2C1-204ENST00000428331 ADRA1AP35348 466 aa10.67□□□□□ -0.7
ATP2C1-204ENST00000428331 OR4D2P58180 307 aa10.67□□□□□ -0.7
ATP2C1-204ENST00000428331 EMX2Q04743 252 aa10.67□□□□□ -0.7
ATP2C1-204ENST00000428331 KRR1Q13601 381 aaKnown RBP10.67□□□□□ -0.7
ATP2C1-204ENST00000428331 RCAN2Q14206 197 aa10.67□□□□□ -0.7
ATP2C1-204ENST00000428331 TSNQ15631 228 aaKnown RBP10.67□□□□□ -0.7
ATP2C1-204ENST00000428331 CRY1Q16526 586 aa10.67□□□□□ -0.7
ATP2C1-204ENST00000428331 SULT1C3Q6IMI6 304 aa10.67□□□□□ -0.7
ATP2C1-204ENST00000428331 P2RY8Q86VZ1 359 aa10.67□□□□□ -0.7
ATP2C1-204ENST00000428331 SPARTQ8N0X7 666 aa10.67□□□□□ -0.7
ATP2C1-204ENST00000428331 GAD1Q99259 594 aa10.67□□□□□ -0.7
ATP2C1-204ENST00000428331 SEMA3CQ99985 751 aa10.67□□□□□ -0.7
ATP2C1-204ENST00000428331 APOL4Q9BPW4 351 aa10.67□□□□□ -0.7
ATP2C1-204ENST00000428331 HEPHQ9BQS7 1158 aa10.67□□□□□ -0.7
ATP2C1-204ENST00000428331 DPY30Q9C005 99 aa10.67□□□□□ -0.7
ATP2C1-204ENST00000428331 INVSQ9Y283 1065 aa10.67□□□□□ -0.7
ATP2C1-204ENST00000428331 OAS3Q9Y6K5 1087 aaKnown RBP10.67□□□□□ -0.7
ATP2C1-204ENST00000428331 PPP6CO00743 305 aa10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 MSI1O43347 362 aaKnown RBP10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 ASNA1O43681 348 aa10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 CACNG3O60359 315 aa10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 NOBOXO60393 691 aa10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 KRT75O95678 551 aa10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 CRHBPP24387 322 aa10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 FOXA1P55317 472 aa10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 IL2P60568 153 aa10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 PAGE3Q5JUK9 113 aa10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 CACHD1Q5VU97 1274 aa10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 SMG8Q8ND04 991 aaKnown RBP10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 PSMA8Q8TAA3 256 aa10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 KIAA1191Q96A73 305 aa10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 INTS7Q9NVH2 962 aaKnown RBP10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 GPR45Q9Y5Y3 372 aa10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 DNAJC25-GNG10A0A024R161 153 aa10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 C2orf81A6NN90 581 aa10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 RAMP2O60895 175 aa10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 OGNP20774 298 aaKnown RBP10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 CSRP3P50461 194 aa10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 DEFA1P59665 94 aa10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 DEFA3P59666 94 aa10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 GABARAPL2P60520 117 aa10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 C8orf82Q6P1X6 216 aaPredicted RBP10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 SLC2A7Q6PXP3 512 aa10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 HIPK1Q86Z02 1210 aa10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 P3H2Q8IVL5 708 aa10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 ARHGAP12Q8IWW6 846 aa10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 PNPLA1Q8N8W4 532 aa10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 ATP6V0D2Q8N8Y2 350 aa10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 POP5Q969H6 163 aaKnown RBP10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 EGFL8Q99944 293 aa10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 NEURL2Q9BR09 285 aa10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 POPDC3Q9HBV1 291 aa10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 CASTOR2A6NHX0 329 aa10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 SULT1C4O75897 302 aa10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 SMIM10L2AP0DMW4 78 aa10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 SMIM10L2BP0DMW5 78 aa10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 HOXB6P17509 224 aaKnown RBP10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 KCNC1P48547 511 aa10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 NEK2P51955 445 aa10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 NDUFA5Q16718 116 aa10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 PTPRNQ16849 979 aa10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 PGS1Q32NB8 556 aa10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 DNAJC14Q6Y2X3 702 aaPredicted RBP10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 PAGE2Q7Z2X7 111 aa10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 ERLEC1Q96DZ1 483 aa10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 SMURF2Q9HAU4 748 aa10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 ARNT2Q9HBZ2 717 aa10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 FAM118AQ9NWS6 357 aa10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 MARCH4Q9P2E8 410 aaPredicted RBP10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 DLGAP1O14490 977 aa10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 BCKDKO14874 412 aa10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 MMP3P08254 477 aa10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 TPTEP56180 551 aa10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 MAD2L1Q13257 205 aaPredicted RBP10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 KCNAB2Q13303 367 aa10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 UGT3A1Q6NUS8 523 aa10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 PAQR3Q6TCH7 311 aa10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 ALKAL1Q6UXT8 129 aa10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 TAS2R42Q7RTR8 314 aa10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 BNIPLQ7Z465 357 aa10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 GALNT7Q86SF2 657 aa10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 PPP1R13LQ8WUF5 828 aa10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 ZHX1-C8orf76Q96EF9 292 aa10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 ZNF599Q96NL3 588 aa10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 RPRD1AQ96P16 312 aaPredicted RBP10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 ACOX2Q99424 681 aa10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 ZYG11BQ9C0D3 744 aa10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 RIBC2Q9H4K1 309 aa10.66□□□□□ -0.7
ATP2C1-204ENST00000428331 ABCB10Q9NRK6 738 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms