RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 LGALS13Q9UHV8 139 aa13.75□□□□□ -0.21
RPL28-202ENST00000426763 UPK3BL1B0FP48 263 aa13.75□□□□□ -0.21
RPL28-202ENST00000426763 UPK3BL2E5RIL1 263 aa13.75□□□□□ -0.21
RPL28-202ENST00000426763 PDE9AO76083 593 aa13.75□□□□□ -0.21
RPL28-202ENST00000426763 TRBC1P01850 177 aa13.75□□□□□ -0.21
RPL28-202ENST00000426763 PRKCGP05129 697 aa13.75□□□□□ -0.21
RPL28-202ENST00000426763 HOXB2P14652 356 aa13.75□□□□□ -0.21
RPL28-202ENST00000426763 CCNHP51946 323 aaPredicted RBP13.75□□□□□ -0.21
RPL28-202ENST00000426763 UBE3AQ05086 875 aa13.75□□□□□ -0.21
RPL28-202ENST00000426763 SLC34A1Q06495 639 aa13.75□□□□□ -0.21
RPL28-202ENST00000426763 SETD9Q8NE22 299 aa13.75□□□□□ -0.21
RPL28-202ENST00000426763 BHLHE22Q8NFJ8 381 aaPredicted RBP13.75□□□□□ -0.21
RPL28-202ENST00000426763 OR4A15Q8NGL6 344 aa13.75□□□□□ -0.21
RPL28-202ENST00000426763 ZNF30P17039 623 aa13.75□□□□□ -0.21
RPL28-202ENST00000426763 SERINC3Q13530 473 aa13.75□□□□□ -0.21
RPL28-202ENST00000426763 C1DQ13901 141 aaKnown RBP13.75□□□□□ -0.21
RPL28-202ENST00000426763 UBAP2LQ14157 1087 aaKnown RBP13.75□□□□□ -0.21
RPL28-202ENST00000426763 ALG11Q2TAA5 492 aa13.75□□□□□ -0.21
RPL28-202ENST00000426763 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.75□□□□□ -0.21
RPL28-202ENST00000426763 NAT8LQ8N9F0 302 aa13.75□□□□□ -0.21
RPL28-202ENST00000426763 SLCO2A1Q92959 643 aa13.75□□□□□ -0.21
RPL28-202ENST00000426763 C12orf66Q96MD2 445 aa13.75□□□□□ -0.21
RPL28-202ENST00000426763 FIZ1Q96SL8 496 aa13.75□□□□□ -0.21
RPL28-202ENST00000426763 AGAP2Q99490 1192 aa13.75□□□□□ -0.21
RPL28-202ENST00000426763 RIOK2Q9BVS4 552 aaKnown RBP13.75□□□□□ -0.21
RPL28-202ENST00000426763 SRMSQ9H3Y6 488 aa13.75□□□□□ -0.21
RPL28-202ENST00000426763 ALPIP09923 528 aa13.75□□□□□ -0.21
RPL28-202ENST00000426763 DRD4P21917 467 aa13.75□□□□□ -0.21
RPL28-202ENST00000426763 SLC25A3Q00325 362 aa13.75□□□□□ -0.21
RPL28-202ENST00000426763 DYNC1I2Q13409 638 aaKnown RBP13.75□□□□□ -0.21
RPL28-202ENST00000426763 AP1ARQ63HQ0 302 aa13.75□□□□□ -0.21
RPL28-202ENST00000426763 GDPD5Q8WTR4 605 aa13.75□□□□□ -0.21
RPL28-202ENST00000426763 LMLNQ96KR4 655 aa13.75□□□□□ -0.21
RPL28-202ENST00000426763 TMEM79Q9BSE2 394 aa13.75□□□□□ -0.21
RPL28-202ENST00000426763 MAP10Q9P2G4 905 aa13.75□□□□□ -0.21
RPL28-202ENST00000426763 DYTNA2CJ06 578 aa13.75□□□□□ -0.21
RPL28-202ENST00000426763 IQCF5A8MTL0 148 aa13.75□□□□□ -0.21
RPL28-202ENST00000426763 PRAMEF11O60813 436 aa13.75□□□□□ -0.21
RPL28-202ENST00000426763 BNIP2Q12982 314 aa13.75□□□□□ -0.21
RPL28-202ENST00000426763 PITRM1Q5JRX3 1037 aa13.75□□□□□ -0.21
RPL28-202ENST00000426763 POP5Q969H6 163 aaKnown RBP13.75□□□□□ -0.21
RPL28-202ENST00000426763 NACC2Q96BF6 587 aa13.75□□□□□ -0.21
RPL28-202ENST00000426763 BTBD1Q9H0C5 482 aa13.75□□□□□ -0.21
RPL28-202ENST00000426763 DDX60Q8IY21 1712 aaKnown RBP13.74□□□□□ -0.21
RPL28-202ENST00000426763 BBIP1A8MTZ0 92 aa13.74□□□□□ -0.21
RPL28-202ENST00000426763 VGLL3A8MV65 326 aa13.74□□□□□ -0.21
RPL28-202ENST00000426763 TRIM38O00635 465 aa13.74□□□□□ -0.21
RPL28-202ENST00000426763 TEX28O15482 410 aa13.74□□□□□ -0.21
RPL28-202ENST00000426763 ITGA2P17301 1181 aa13.74□□□□□ -0.21
RPL28-202ENST00000426763 DPP10Q8N608 796 aa13.74□□□□□ -0.21
RPL28-202ENST00000426763 TTC29Q8NA56 475 aaPredicted RBP13.74□□□□□ -0.21
RPL28-202ENST00000426763 TWIST2Q8WVJ9 160 aa13.74□□□□□ -0.21
RPL28-202ENST00000426763 PAAF1Q9BRP4 392 aa13.74□□□□□ -0.21
RPL28-202ENST00000426763 FBXL12Q9NXK8 326 aa13.74□□□□□ -0.21
RPL28-202ENST00000426763 FETUBQ9UGM5 382 aa13.74□□□□□ -0.21
RPL28-202ENST00000426763 COL22A1Q8NFW1 1626 aaPredicted RBP13.74□□□□□ -0.21
RPL28-202ENST00000426763 PTGESO14684 152 aa13.74□□□□□ -0.21
RPL28-202ENST00000426763 ZMPSTE24O75844 475 aa13.74□□□□□ -0.21
RPL28-202ENST00000426763 OAZ2O95190 189 aa13.74□□□□□ -0.21
RPL28-202ENST00000426763 SLC35G6P0C7Q6 338 aa13.74□□□□□ -0.21
RPL28-202ENST00000426763 CST5P28325 142 aaPredicted RBP13.74□□□□□ -0.21
RPL28-202ENST00000426763 RTP2Q5QGT7 225 aa13.74□□□□□ -0.21
RPL28-202ENST00000426763 ENPP7Q6UWV6 458 aa13.74□□□□□ -0.21
RPL28-202ENST00000426763 LYSMD3Q7Z3D4 306 aa13.74□□□□□ -0.21
RPL28-202ENST00000426763 ZNF366Q8N895 744 aa13.74□□□□□ -0.21
RPL28-202ENST00000426763 TSSK3Q96PN8 268 aa13.74□□□□□ -0.21
RPL28-202ENST00000426763 RETREG1Q9H6L5 497 aa13.74□□□□□ -0.21
RPL28-202ENST00000426763 PDP2Q9P2J9 529 aa13.74□□□□□ -0.21
RPL28-202ENST00000426763 ZNF487B1APH4 448 aa13.74□□□□□ -0.21
RPL28-202ENST00000426763 SERPINB7O75635 380 aa13.74□□□□□ -0.21
RPL28-202ENST00000426763 ATP6V1G2O95670 118 aa13.74□□□□□ -0.21
RPL28-202ENST00000426763 TAS2R39P59534 338 aa13.74□□□□□ -0.21
RPL28-202ENST00000426763 CHIT1Q13231 466 aa13.74□□□□□ -0.21
RPL28-202ENST00000426763 AAK1Q2M2I8 961 aa13.74□□□□□ -0.21
RPL28-202ENST00000426763 DCAF12L1Q5VU92 463 aa13.74□□□□□ -0.21
RPL28-202ENST00000426763 ZNF783Q6ZMS7 281 aa13.74□□□□□ -0.21
RPL28-202ENST00000426763 C15orf39Q6ZRI6 1047 aa13.74□□□□□ -0.21
RPL28-202ENST00000426763 PTCD3Q96EY7 689 aaKnown RBP13.74□□□□□ -0.21
RPL28-202ENST00000426763 SLC2A13Q96QE2 648 aa13.74□□□□□ -0.21
RPL28-202ENST00000426763 POLR1BQ9H9Y6 1135 aa13.74□□□□□ -0.21
RPL28-202ENST00000426763 CNTN5O94779 1100 aa13.74□□□□□ -0.21
RPL28-202ENST00000426763 PAICSP22234 425 aaKnown RBP13.74□□□□□ -0.21
RPL28-202ENST00000426763 BUD31P41223 144 aaPredicted RBP13.74□□□□□ -0.21
RPL28-202ENST00000426763 BLVRAP53004 296 aa13.74□□□□□ -0.21
RPL28-202ENST00000426763 STX4Q12846 297 aa13.74□□□□□ -0.21
RPL28-202ENST00000426763 BIKQ13323 160 aa13.74□□□□□ -0.21
RPL28-202ENST00000426763 TSNQ15631 228 aaKnown RBP13.74□□□□□ -0.21
RPL28-202ENST00000426763 CDKN2AIPNLQ96HQ2 116 aa13.74□□□□□ -0.21
RPL28-202ENST00000426763 CIDEBQ9UHD4 219 aa13.74□□□□□ -0.21
RPL28-202ENST00000426763 PI15O43692 258 aa13.73□□□□□ -0.21
RPL28-202ENST00000426763 UNC5CO95185 931 aa13.73□□□□□ -0.21
RPL28-202ENST00000426763 HIST1H2ABP04908 130 aa13.73□□□□□ -0.21
RPL28-202ENST00000426763 UROSP10746 265 aa13.73□□□□□ -0.21
RPL28-202ENST00000426763 HSD17B2P37059 387 aa13.73□□□□□ -0.21
RPL28-202ENST00000426763 ACTR1BP42025 376 aa13.73□□□□□ -0.21
RPL28-202ENST00000426763 SMIM11AP58511 58 aa13.73□□□□□ -0.21
RPL28-202ENST00000426763 ACTR1AP61163 376 aa13.73□□□□□ -0.21
RPL28-202ENST00000426763 HIST3H2AQ7L7L0 130 aa13.73□□□□□ -0.21
RPL28-202ENST00000426763 HIST1H2ACQ93077 130 aa13.73□□□□□ -0.21
RPL28-202ENST00000426763 AZIN2Q96A70 460 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms