RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 THAP1Q9NVV9 213 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 FBXO34Q9NWN3 711 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 TMEM161AQ9NX61 479 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 KCNN3Q9UGI6 736 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 HAO1Q9UJM8 370 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 PACSIN3Q9UKS6 424 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 DNPEPQ9ULA0 475 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 BARX2Q9UMQ3 279 aaPredicted RBP3.7□□□□□ -1.82
SF3B1-205ENST00000424674 SNX7Q9UNH6 387 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 EXO1Q9UQ84 846 aaKnown RBP3.7□□□□□ -1.82
SF3B1-205ENST00000424674 CHST2Q9Y4C5 530 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 PCDHA10Q9Y5I2 948 aa3.7□□□□□ -1.82
SF3B1-205ENST00000424674 ZCCHC6Q5VYS8 1495 aaKnown RBP3.69□□□□□ -1.82
SF3B1-205ENST00000424674 TNIKQ9UKE5 1360 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 CENPVL1A0A0U1RR11 272 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 GAGE12BA1L429 117 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 GAGE12HA6NDE8 117 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 C5orf51A6NDU8 294 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 AGAP5A6NIR3 686 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 FOXO6A8MYZ6 492 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 DIRC3C9JPN6 131 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 GOLGA8SH3BPF8 625 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 STMND1H3BQB6 276 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 RNASET2O00584 256 aaKnown RBP3.69□□□□□ -1.82
SF3B1-205ENST00000424674 SMAD9O15198 467 aaKnown RBP3.69□□□□□ -1.82
SF3B1-205ENST00000424674 CTIFO43310 598 aaKnown RBP3.69□□□□□ -1.82
SF3B1-205ENST00000424674 MED7O43513 233 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 TLX2O43763 284 aaPredicted RBP3.69□□□□□ -1.82
SF3B1-205ENST00000424674 LPXNO60711 386 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 MED24O75448 989 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 CRCPO75575 148 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 SLC25A12O75746 678 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 NCR1O76036 304 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 HAUS5O94927 633 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 SLC16A8O95907 504 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 CH25HO95992 272 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 OTCP00480 354 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 GH1P01241 217 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 KRT14P02533 472 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 LMNAP02545 664 aaKnown RBP3.69□□□□□ -1.82
SF3B1-205ENST00000424674 FGBP02675 491 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 LIPFP07098 398 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 IVLP07476 585 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 CHRM4P08173 479 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 SBK3P0C264 359 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 ATXN1LP0C7T5 689 aaKnown RBP3.69□□□□□ -1.82
SF3B1-205ENST00000424674 STAG3L3P0CL85 134 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 C8orf89P0DMQ9 161 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 IRF1P10914 325 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 RALBP11234 206 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 ZNF3P17036 446 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 CHRM3P20309 590 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 CYP2A7P20853 494 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 PTBP1P26599 531 aaKnown RBP eCLIP3.69□□□□□ -1.82
SF3B1-205ENST00000424674 KLRC2P26717 231 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 CD6P30203 668 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 FMO4P31512 558 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 PCGF2P35227 344 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 GABRB2P47870 512 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 ALDH1A3P47895 512 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 NR2C2P49116 596 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 FAM3BP58499 235 aaPredicted RBP3.69□□□□□ -1.82
SF3B1-205ENST00000424674 EIF3EP60228 445 aaKnown RBP3.69□□□□□ -1.82
SF3B1-205ENST00000424674 RAP2BP61225 183 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 TFAP4Q01664 338 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 TNFRSF17Q02223 184 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 ACSM2AQ08AH3 577 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 TCF15Q12870 199 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 CEBPEQ15744 281 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 CDO1Q16878 200 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 TPD52L1Q16890 204 aaPredicted RBP3.69□□□□□ -1.82
SF3B1-205ENST00000424674 NADK2Q4G0N4 442 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 CBWD6Q4V339 395 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 ZNF667Q5HYK9 610 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 CBWD3Q5JTY5 395 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 ARHGAP40Q5TG30 622 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 HECTD2Q5U5R9 776 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 ACSM2BQ68CK6 577 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 TTC19Q6DKK2 380 aaPredicted RBP3.69□□□□□ -1.82
SF3B1-205ENST00000424674 MIS18BP1Q6P0N0 1132 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 AAGABQ6PD74 315 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 KIF6Q6ZMV9 814 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 TMCO2Q7Z6W1 182 aaPredicted RBP3.69□□□□□ -1.82
SF3B1-205ENST00000424674 TADA2BQ86TJ2 420 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 LUZP1Q86V48 1076 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 SYT12Q8IV01 421 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 SLC22A9Q8IVM8 553 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 CCDC83Q8IWF9 413 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 CCDC65Q8IXS2 484 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 HACE1Q8IYU2 909 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 SIRT6Q8N6T7 355 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 TRIML2Q8N7C3 387 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 ENDOVQ8N8Q3 282 aaKnown RBP3.69□□□□□ -1.82
SF3B1-205ENST00000424674 CCNYQ8ND76 341 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 BEND2Q8NDZ0 799 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 OR10S1Q8NGN2 331 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 AKR7LQ8NHP1 331 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 BPIFB1Q8TDL5 484 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 ELP5Q8TE02 316 aa3.69□□□□□ -1.82
SF3B1-205ENST00000424674 CHURC1Q8WUH1 139 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms