RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 CAPN1P07384 714 aa11.81□□□□□ -0.52
PTPRN-204ENST00000423636 SYN1P17600 705 aa11.81□□□□□ -0.52
PTPRN-204ENST00000423636 CR2P20023 1033 aa11.81□□□□□ -0.52
PTPRN-204ENST00000423636 KPNA2P52292 529 aaKnown RBP11.81□□□□□ -0.52
PTPRN-204ENST00000423636 IL2P60568 153 aa11.81□□□□□ -0.52
PTPRN-204ENST00000423636 ELAVL2Q12926 359 aaKnown RBP11.81□□□□□ -0.52
PTPRN-204ENST00000423636 PTGR1Q14914 329 aa11.81□□□□□ -0.52
PTPRN-204ENST00000423636 CRIPAKQ8N1N5 446 aa11.81□□□□□ -0.52
PTPRN-204ENST00000423636 STAG3L4Q8TBR4 150 aa11.81□□□□□ -0.52
PTPRN-204ENST00000423636 METTL6Q8TCB7 284 aa11.81□□□□□ -0.52
PTPRN-204ENST00000423636 ASIC4Q96FT7 647 aa11.81□□□□□ -0.52
PTPRN-204ENST00000423636 SIKE1Q9BRV8 207 aa11.81□□□□□ -0.52
PTPRN-204ENST00000423636 STN1Q9H668 368 aaKnown RBP11.81□□□□□ -0.52
PTPRN-204ENST00000423636 MRM3Q9HC36 420 aaKnown RBP11.81□□□□□ -0.52
PTPRN-204ENST00000423636 MRPL17Q9NRX2 175 aaKnown RBP11.81□□□□□ -0.52
PTPRN-204ENST00000423636 VPS4AQ9UN37 437 aa11.81□□□□□ -0.52
PTPRN-204ENST00000423636 ZNF711Q9Y462 761 aa11.81□□□□□ -0.52
PTPRN-204ENST00000423636 H2AFYO75367 372 aaKnown RBP11.8□□□□□ -0.52
PTPRN-204ENST00000423636 VPS26AO75436 327 aa11.8□□□□□ -0.52
PTPRN-204ENST00000423636 LRATO95237 230 aa11.8□□□□□ -0.52
PTPRN-204ENST00000423636 MYOGP15173 224 aa11.8□□□□□ -0.52
PTPRN-204ENST00000423636 GRIA2P42262 883 aa11.8□□□□□ -0.52
PTPRN-204ENST00000423636 HK2P52789 917 aa11.8□□□□□ -0.52
PTPRN-204ENST00000423636 EPHB3P54753 998 aa11.8□□□□□ -0.52
PTPRN-204ENST00000423636 ERVPABLB-1P60509 514 aa11.8□□□□□ -0.52
PTPRN-204ENST00000423636 MESP2Q0VG99 397 aa11.8□□□□□ -0.52
PTPRN-204ENST00000423636 MED21Q13503 144 aa11.8□□□□□ -0.52
PTPRN-204ENST00000423636 CPSF6Q16630 551 aaKnown RBP eCLIP11.8□□□□□ -0.52
PTPRN-204ENST00000423636 ANKS6Q68DC2 871 aa11.8□□□□□ -0.52
PTPRN-204ENST00000423636 SATL1Q86VE3 508 aa11.8□□□□□ -0.52
PTPRN-204ENST00000423636 PDSS2Q86YH6 399 aa11.8□□□□□ -0.52
PTPRN-204ENST00000423636 LRRC49Q8IUZ0 686 aa11.8□□□□□ -0.52
PTPRN-204ENST00000423636 PELI3Q8N2H9 469 aa11.8□□□□□ -0.52
PTPRN-204ENST00000423636 FIBCD1Q8N539 461 aa11.8□□□□□ -0.52
PTPRN-204ENST00000423636 TBCDQ9BTW9 1192 aa11.8□□□□□ -0.52
PTPRN-204ENST00000423636 MRPL9Q9BYD2 267 aaKnown RBP11.8□□□□□ -0.52
PTPRN-204ENST00000423636 ZNF385DQ9H6B1 395 aa11.8□□□□□ -0.52
PTPRN-204ENST00000423636 IL26Q9NPH9 171 aa11.8□□□□□ -0.52
PTPRN-204ENST00000423636 CRLS1Q9UJA2 301 aa11.8□□□□□ -0.52
PTPRN-204ENST00000423636 ILVBLA1L0T0 632 aa11.8□□□□□ -0.52
PTPRN-204ENST00000423636 OR2AG2A6NM03 316 aa11.8□□□□□ -0.52
PTPRN-204ENST00000423636 PLOD2O00469 737 aa11.8□□□□□ -0.52
PTPRN-204ENST00000423636 GIPC1O14908 333 aa11.8□□□□□ -0.52
PTPRN-204ENST00000423636 ANGPT2O15123 496 aa11.8□□□□□ -0.52
PTPRN-204ENST00000423636 SYNCRIPO60506 623 aaKnown RBP11.8□□□□□ -0.52
PTPRN-204ENST00000423636 FKBP6O75344 327 aa11.8□□□□□ -0.52
PTPRN-204ENST00000423636 CXCL14O95715 111 aa11.8□□□□□ -0.52
PTPRN-204ENST00000423636 SOD2P04179 222 aa11.8□□□□□ -0.52
PTPRN-204ENST00000423636 ATP6V1B2P21281 511 aa11.8□□□□□ -0.52
PTPRN-204ENST00000423636 PBLDP30039 288 aaPredicted RBP11.8□□□□□ -0.52
PTPRN-204ENST00000423636 OXTRP30559 389 aa11.8□□□□□ -0.52
PTPRN-204ENST00000423636 CASP9P55211 416 aa11.8□□□□□ -0.52
PTPRN-204ENST00000423636 MTPNP58546 118 aa11.8□□□□□ -0.52
PTPRN-204ENST00000423636 TAF1AQ15573 450 aaPredicted RBP11.8□□□□□ -0.52
PTPRN-204ENST00000423636 TGFBIQ15582 683 aa11.8□□□□□ -0.52
PTPRN-204ENST00000423636 DBN1Q16643 649 aa11.8□□□□□ -0.52
PTPRN-204ENST00000423636 C6orf10Q5SRN2 563 aa11.8□□□□□ -0.52
PTPRN-204ENST00000423636 METTL21CQ5VZV1 264 aa11.8□□□□□ -0.52
PTPRN-204ENST00000423636 ASTLQ6HA08 431 aaPredicted RBP11.8□□□□□ -0.52
PTPRN-204ENST00000423636 SERPINA13PQ6UXR4 307 aa11.8□□□□□ -0.52
PTPRN-204ENST00000423636 ANKRD46Q86W74 232 aa11.8□□□□□ -0.52
PTPRN-204ENST00000423636 PGAM4Q8N0Y7 254 aa11.8□□□□□ -0.52
PTPRN-204ENST00000423636 LILRA3Q8N6C8 439 aaPredicted RBP11.8□□□□□ -0.52
PTPRN-204ENST00000423636 PHF12Q96QT6 1004 aa11.8□□□□□ -0.52
PTPRN-204ENST00000423636 SLC46A2Q9BY10 475 aa11.8□□□□□ -0.52
PTPRN-204ENST00000423636 ADGRE3Q9BY15 652 aa11.8□□□□□ -0.52
PTPRN-204ENST00000423636 COQ10BQ9H8M1 238 aa11.8□□□□□ -0.52
PTPRN-204ENST00000423636 MEAF6Q9HAF1 191 aa11.8□□□□□ -0.52
PTPRN-204ENST00000423636 ZFYVE1Q9HBF4 777 aa11.8□□□□□ -0.52
PTPRN-204ENST00000423636 INPP4BO15327 924 aa11.8□□□□□ -0.52
PTPRN-204ENST00000423636 LUC7L3O95232 432 aaKnown RBP11.8□□□□□ -0.52
PTPRN-204ENST00000423636 TSPAN12O95859 305 aa11.8□□□□□ -0.52
PTPRN-204ENST00000423636 GSNP06396 782 aa11.8□□□□□ -0.52
PTPRN-204ENST00000423636 METAP1P53582 386 aa11.8□□□□□ -0.52
PTPRN-204ENST00000423636 NKX3-2P78367 333 aa11.8□□□□□ -0.52
PTPRN-204ENST00000423636 BCL2L1Q07817 233 aa11.8□□□□□ -0.52
PTPRN-204ENST00000423636 DDX39BQ13838 428 aaKnown RBP11.8□□□□□ -0.52
PTPRN-204ENST00000423636 LRP8Q14114 963 aa11.8□□□□□ -0.52
PTPRN-204ENST00000423636 LRRC26Q2I0M4 334 aa11.8□□□□□ -0.52
PTPRN-204ENST00000423636 AFTPHQ6ULP2 937 aa11.8□□□□□ -0.52
PTPRN-204ENST00000423636 HERC6Q8IVU3 1022 aa11.8□□□□□ -0.52
PTPRN-204ENST00000423636 KLHDC8BQ8IXV7 354 aa11.8□□□□□ -0.52
PTPRN-204ENST00000423636 MYO19Q96H55 970 aa11.8□□□□□ -0.52
PTPRN-204ENST00000423636 SERPINI1Q99574 410 aa11.8□□□□□ -0.52
PTPRN-204ENST00000423636 NRTNQ99748 197 aa11.8□□□□□ -0.52
PTPRN-204ENST00000423636 TSEN34Q9BSV6 310 aaKnown RBP11.8□□□□□ -0.52
PTPRN-204ENST00000423636 ATG10Q9H0Y0 220 aa11.8□□□□□ -0.52
PTPRN-204ENST00000423636 CROTQ9UKG9 612 aa11.8□□□□□ -0.52
PTPRN-204ENST00000423636 WDFY4Q6ZS81 3184 aa11.79□□□□□ -0.52
PTPRN-204ENST00000423636 NME4O00746 187 aa11.79□□□□□ -0.52
PTPRN-204ENST00000423636 RSL1D1O76021 490 aaKnown RBP11.79□□□□□ -0.52
PTPRN-204ENST00000423636 C8AP07357 584 aa11.79□□□□□ -0.52
PTPRN-204ENST00000423636 CHRM1P11229 460 aaPredicted RBP11.79□□□□□ -0.52
PTPRN-204ENST00000423636 HLA-FP30511 346 aa11.79□□□□□ -0.52
PTPRN-204ENST00000423636 ERVFC1P60507 584 aa11.79□□□□□ -0.52
PTPRN-204ENST00000423636 PDK3Q15120 406 aa11.79□□□□□ -0.52
PTPRN-204ENST00000423636 NR6A1Q15406 480 aa11.79□□□□□ -0.52
PTPRN-204ENST00000423636 NCEH1Q6PIU2 408 aa11.79□□□□□ -0.52
PTPRN-204ENST00000423636 C2orf73Q8N5S3 287 aaPredicted RBP11.79□□□□□ -0.52
PTPRN-204ENST00000423636 C12orf76Q8N812 135 aaPredicted RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms