RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 DYNLT1P63172 113 aa15.91■□□□□ 0.14
COL18A1-205ENST00000423214 CDK18Q07002 472 aa15.91■□□□□ 0.14
COL18A1-205ENST00000423214 GTF2H3Q13889 308 aa15.91■□□□□ 0.14
COL18A1-205ENST00000423214 SEPT6Q14141 434 aa15.91■□□□□ 0.14
COL18A1-205ENST00000423214 TRIM14Q14142 442 aa15.91■□□□□ 0.14
COL18A1-205ENST00000423214 SLC9A4Q6AI14 798 aa15.91■□□□□ 0.14
COL18A1-205ENST00000423214 C16orf46Q6P387 395 aa15.91■□□□□ 0.14
COL18A1-205ENST00000423214 NPNTQ6UXI9 565 aa15.91■□□□□ 0.14
COL18A1-205ENST00000423214 TMEM26Q6ZUK4 368 aa15.91■□□□□ 0.14
COL18A1-205ENST00000423214 TIPARPQ7Z3E1 657 aaKnown RBP15.91■□□□□ 0.14
COL18A1-205ENST00000423214 OR8K1Q8NGG5 319 aa15.91■□□□□ 0.14
COL18A1-205ENST00000423214 EID2BQ96D98 161 aa15.91■□□□□ 0.14
COL18A1-205ENST00000423214 TGM7Q96PF1 710 aa15.91■□□□□ 0.14
COL18A1-205ENST00000423214 SRPK1Q96SB4 655 aaKnown RBP15.91■□□□□ 0.14
COL18A1-205ENST00000423214 SLC25A51Q9H1U9 297 aa15.91■□□□□ 0.14
COL18A1-205ENST00000423214 ZNHIT6Q9NWK9 470 aaKnown RBP15.91■□□□□ 0.14
COL18A1-205ENST00000423214 SIDT1Q9NXL6 827 aaKnown RBP15.91■□□□□ 0.14
COL18A1-205ENST00000423214 A0A0A6YYK5 440 aaPredicted RBP15.9■□□□□ 0.14
COL18A1-205ENST00000423214 CHUKO15111 745 aa15.9■□□□□ 0.14
COL18A1-205ENST00000423214 AKR1B10O60218 316 aa15.9■□□□□ 0.14
COL18A1-205ENST00000423214 MTX2O75431 263 aa15.9■□□□□ 0.14
COL18A1-205ENST00000423214 C9P02748 559 aa15.9■□□□□ 0.14
COL18A1-205ENST00000423214 TPM1P09493 284 aa15.9■□□□□ 0.14
COL18A1-205ENST00000423214 VCLP18206 1134 aa15.9■□□□□ 0.14
COL18A1-205ENST00000423214 XRCC1P18887 633 aaPredicted RBP15.9■□□□□ 0.14
COL18A1-205ENST00000423214 OAS2P29728 719 aaKnown RBP15.9■□□□□ 0.14
COL18A1-205ENST00000423214 HNRNPH3P31942 346 aaKnown RBP15.9■□□□□ 0.14
COL18A1-205ENST00000423214 SEPHS1P49903 392 aa15.9■□□□□ 0.14
COL18A1-205ENST00000423214 MAP7Q14244 749 aa15.9■□□□□ 0.14
COL18A1-205ENST00000423214 SLC14A2Q15849 920 aa15.9■□□□□ 0.14
COL18A1-205ENST00000423214 TMC3Q7Z5M5 1100 aa15.9■□□□□ 0.14
COL18A1-205ENST00000423214 TRAPPC5Q8IUR0 188 aa15.9■□□□□ 0.14
COL18A1-205ENST00000423214 VSTM4Q8IW00 320 aa15.9■□□□□ 0.14
COL18A1-205ENST00000423214 RHOT2Q8IXI1 618 aa15.9■□□□□ 0.14
COL18A1-205ENST00000423214 GDAP1Q8TB36 358 aa15.9■□□□□ 0.14
COL18A1-205ENST00000423214 SLC35G2Q8TBE7 412 aa15.9■□□□□ 0.14
COL18A1-205ENST00000423214 APOBEC4Q8WW27 367 aaKnown RBP15.9■□□□□ 0.14
COL18A1-205ENST00000423214 CXorf40BQ96DE9 158 aa15.9■□□□□ 0.14
COL18A1-205ENST00000423214 STAMBPL1Q96FJ0 436 aa15.9■□□□□ 0.14
COL18A1-205ENST00000423214 OLFM3Q96PB7 478 aa15.9■□□□□ 0.14
COL18A1-205ENST00000423214 SPRY4Q9C004 299 aa15.9■□□□□ 0.14
COL18A1-205ENST00000423214 OGFRQ9NZT2 677 aa15.9■□□□□ 0.14
COL18A1-205ENST00000423214 SCHIP1Q9P0W5 487 aaPredicted RBP15.9■□□□□ 0.14
COL18A1-205ENST00000423214 SLC23A2Q9UGH3 650 aa15.9■□□□□ 0.14
COL18A1-205ENST00000423214 ANAPC2Q9UJX6 822 aa15.9■□□□□ 0.14
COL18A1-205ENST00000423214 RPS6KL1Q9Y6S9 549 aa15.9■□□□□ 0.14
COL18A1-205ENST00000423214 SSU72P8A0A1W2PR75 194 aa15.89■□□□□ 0.13
COL18A1-205ENST00000423214 TOX3O15405 576 aaPredicted RBP15.89■□□□□ 0.13
COL18A1-205ENST00000423214 PMPCBO75439 489 aa15.89■□□□□ 0.13
COL18A1-205ENST00000423214 CDK14O94921 469 aa15.89■□□□□ 0.13
COL18A1-205ENST00000423214 NDST3O95803 873 aa15.89■□□□□ 0.13
COL18A1-205ENST00000423214 MT-CYBP00156 380 aaPredicted RBP15.89■□□□□ 0.13
COL18A1-205ENST00000423214 TNNT1P13805 278 aa15.89■□□□□ 0.13
COL18A1-205ENST00000423214 BPIP17213 487 aa15.89■□□□□ 0.13
COL18A1-205ENST00000423214 IDSP22304 550 aa15.89■□□□□ 0.13
COL18A1-205ENST00000423214 RPL10P27635 214 aaKnown RBP15.89■□□□□ 0.13
COL18A1-205ENST00000423214 ARHGAP25P42331 645 aa15.89■□□□□ 0.13
COL18A1-205ENST00000423214 CAPZBP47756 277 aa15.89■□□□□ 0.13
COL18A1-205ENST00000423214 SKIDA1Q1XH10 827 aa15.89■□□□□ 0.13
COL18A1-205ENST00000423214 DEFB109BQ30KR1 87 aa15.89■□□□□ 0.13
COL18A1-205ENST00000423214 FAM182AQ5T1J6 154 aa15.89■□□□□ 0.13
COL18A1-205ENST00000423214 CYB5D1Q6P9G0 228 aa15.89■□□□□ 0.13
COL18A1-205ENST00000423214 RASGRP3Q8IV61 690 aa15.89■□□□□ 0.13
COL18A1-205ENST00000423214 RBM12BQ8IXT5 1001 aaKnown RBP15.89■□□□□ 0.13
COL18A1-205ENST00000423214 SPATA22Q8NHS9 363 aa15.89■□□□□ 0.13
COL18A1-205ENST00000423214 RNF31Q96EP0 1072 aa15.89■□□□□ 0.13
COL18A1-205ENST00000423214 TTC25Q96NG3 672 aa15.89■□□□□ 0.13
COL18A1-205ENST00000423214 OR6C1Q96RD1 312 aa15.89■□□□□ 0.13
COL18A1-205ENST00000423214 CHP1Q99653 195 aa15.89■□□□□ 0.13
COL18A1-205ENST00000423214 ZCCHC2Q9C0B9 1178 aaKnown RBP15.89■□□□□ 0.13
COL18A1-205ENST00000423214 EPN3Q9H201 632 aa15.89■□□□□ 0.13
COL18A1-205ENST00000423214 ZNF768Q9H5H4 540 aaKnown RBP15.89■□□□□ 0.13
COL18A1-205ENST00000423214 GLOD4Q9HC38 313 aa15.89■□□□□ 0.13
COL18A1-205ENST00000423214 PCDHB3Q9Y5E6 796 aa15.89■□□□□ 0.13
COL18A1-205ENST00000423214 FLNCQ14315 2725 aa15.88■□□□□ 0.13
COL18A1-205ENST00000423214 C3orf70A6NLC5 250 aaPredicted RBP15.88■□□□□ 0.13
COL18A1-205ENST00000423214 OR52A4PA6NMU1 304 aa15.88■□□□□ 0.13
COL18A1-205ENST00000423214 DLSTP36957 453 aa15.88■□□□□ 0.13
COL18A1-205ENST00000423214 SLC19A1P41440 591 aa15.88■□□□□ 0.13
COL18A1-205ENST00000423214 HALP42357 657 aa15.88■□□□□ 0.13
COL18A1-205ENST00000423214 LEPRP48357 1165 aaKnown RBP15.88■□□□□ 0.13
COL18A1-205ENST00000423214 DRG2P55039 364 aaKnown RBP15.88■□□□□ 0.13
COL18A1-205ENST00000423214 LACTB2Q53H82 288 aaPredicted RBP15.88■□□□□ 0.13
COL18A1-205ENST00000423214 IRGCQ6NXR0 463 aa15.88■□□□□ 0.13
COL18A1-205ENST00000423214 C6orf15Q6UXA7 325 aaPredicted RBP15.88■□□□□ 0.13
COL18A1-205ENST00000423214 B4GALNT4Q76KP1 1039 aa15.88■□□□□ 0.13
COL18A1-205ENST00000423214 RSC1A1Q92681 617 aa15.88■□□□□ 0.13
COL18A1-205ENST00000423214 RNF25Q96BH1 459 aaPredicted RBP15.88■□□□□ 0.13
COL18A1-205ENST00000423214 VPS35Q96QK1 796 aa15.88■□□□□ 0.13
COL18A1-205ENST00000423214 DNAJC7Q99615 494 aa15.88■□□□□ 0.13
COL18A1-205ENST00000423214 BPIFA1Q9NP55 256 aa15.88■□□□□ 0.13
COL18A1-205ENST00000423214 ZNF71Q9NQZ8 489 aaPredicted RBP15.88■□□□□ 0.13
COL18A1-205ENST00000423214 DDX56Q9NY93 547 aaKnown RBP15.88■□□□□ 0.13
COL18A1-205ENST00000423214 UBP1Q9NZI7 540 aa15.88■□□□□ 0.13
COL18A1-205ENST00000423214 ZNF624Q9P2J8 865 aaPredicted RBP15.88■□□□□ 0.13
COL18A1-205ENST00000423214 LNPEPQ9UIQ6 1025 aa15.88■□□□□ 0.13
COL18A1-205ENST00000423214 MRPS18BQ9Y676 258 aaKnown RBP15.88■□□□□ 0.13
COL18A1-205ENST00000423214 SLC30A1Q9Y6M5 507 aa15.88■□□□□ 0.13
COL18A1-205ENST00000423214 TNRC6AQ8NDV7 1962 aaKnown RBP15.87■□□□□ 0.13
COL18A1-205ENST00000423214 KIAA0754O94854 1291 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms