RNA–Protein interactions for RNA: ENST00000422704.6

SEMA4D-208, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4D, Length 4,382 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-208ENST00000422704 MRPL9Q9BYD2 267 aaKnown RBP10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 FZD8Q9H461 694 aa10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 LIN28AQ9H9Z2 209 aaKnown RBP10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 FBRSL1Q9HCM7 1045 aaKnown RBP10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 ASAH2Q9NR71 780 aa10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 INTS7Q9NVH2 962 aaKnown RBP10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 ZSCAN32Q9NX65 697 aa10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 GPSM3Q9Y4H4 160 aa10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 SNPHO15079 494 aa10.53□□□□□ -0.72
SEMA4D-208ENST00000422704 NIPSNAP2O75323 286 aa10.53□□□□□ -0.72
SEMA4D-208ENST00000422704 STK16O75716 305 aa10.53□□□□□ -0.72
SEMA4D-208ENST00000422704 NDST3O95803 873 aa10.53□□□□□ -0.72
SEMA4D-208ENST00000422704 RPIAP49247 311 aa10.53□□□□□ -0.72
SEMA4D-208ENST00000422704 POLR2JP52435 117 aaKnown RBP10.53□□□□□ -0.72
SEMA4D-208ENST00000422704 ATP6V0D1P61421 351 aa10.53□□□□□ -0.72
SEMA4D-208ENST00000422704 NAA20P61599 178 aa10.53□□□□□ -0.72
SEMA4D-208ENST00000422704 ECT2LQ008S8 904 aa10.53□□□□□ -0.72
SEMA4D-208ENST00000422704 POU5F1Q01860 360 aaKnown RBP10.53□□□□□ -0.72
SEMA4D-208ENST00000422704 MXD1Q05195 221 aa10.53□□□□□ -0.72
SEMA4D-208ENST00000422704 RAB6CQ53S08 254 aa10.53□□□□□ -0.72
SEMA4D-208ENST00000422704 BRMS1LQ5PSV4 323 aa10.53□□□□□ -0.72
SEMA4D-208ENST00000422704 AAGABQ6PD74 315 aa10.53□□□□□ -0.72
SEMA4D-208ENST00000422704 PAQR3Q6TCH7 311 aa10.53□□□□□ -0.72
SEMA4D-208ENST00000422704 FRMD7Q6ZUT3 714 aa10.53□□□□□ -0.72
SEMA4D-208ENST00000422704 PIM3Q86V86 326 aa10.53□□□□□ -0.72
SEMA4D-208ENST00000422704 FLCNQ8NFG4 579 aa10.53□□□□□ -0.72
SEMA4D-208ENST00000422704 CANT1Q8WVQ1 401 aa10.53□□□□□ -0.72
SEMA4D-208ENST00000422704 RAB6CQ9H0N0 254 aa10.53□□□□□ -0.72
SEMA4D-208ENST00000422704 GBA3Q9H227 469 aa10.53□□□□□ -0.72
SEMA4D-208ENST00000422704 NKIRAS2Q9NYR9 191 aa10.53□□□□□ -0.72
SEMA4D-208ENST00000422704 MAP4K5Q9Y4K4 846 aa10.53□□□□□ -0.72
SEMA4D-208ENST00000422704 KCTD3Q9Y597 815 aa10.53□□□□□ -0.72
SEMA4D-208ENST00000422704 COMMD3-BMI1R4GMX3 469 aa10.53□□□□□ -0.72
SEMA4D-208ENST00000422704 ZNF318Q5VUA4 2279 aa10.53□□□□□ -0.72
SEMA4D-208ENST00000422704 LDB2O43679 373 aa10.53□□□□□ -0.72
SEMA4D-208ENST00000422704 SNAP91O60641 907 aa10.53□□□□□ -0.72
SEMA4D-208ENST00000422704 PSIP1O75475 530 aaKnown RBP10.53□□□□□ -0.72
SEMA4D-208ENST00000422704 GCATO75600 419 aa10.53□□□□□ -0.72
SEMA4D-208ENST00000422704 IGFBP4P22692 258 aa10.53□□□□□ -0.72
SEMA4D-208ENST00000422704 RYKP34925 604 aa10.53□□□□□ -0.72
SEMA4D-208ENST00000422704 ZNF135P52742 658 aaPredicted RBP10.53□□□□□ -0.72
SEMA4D-208ENST00000422704 CYP1B1Q16678 543 aa10.53□□□□□ -0.72
SEMA4D-208ENST00000422704 GSTA3Q16772 222 aa10.53□□□□□ -0.72
SEMA4D-208ENST00000422704 FAM174BQ3ZCQ3 159 aa10.53□□□□□ -0.72
SEMA4D-208ENST00000422704 RNF19BQ6ZMZ0 732 aa10.53□□□□□ -0.72
SEMA4D-208ENST00000422704 RBFAQ8N0V3 343 aa10.53□□□□□ -0.72
SEMA4D-208ENST00000422704 TUBGCP5Q96RT8 1024 aa10.53□□□□□ -0.72
SEMA4D-208ENST00000422704 COPS4Q9BT78 406 aa10.53□□□□□ -0.72
SEMA4D-208ENST00000422704 GALPQ9UBC7 116 aa10.53□□□□□ -0.72
SEMA4D-208ENST00000422704 TCAF1Q9Y4C2 921 aa10.53□□□□□ -0.72
SEMA4D-208ENST00000422704 AHCTF1Q8WYP5 2266 aa10.53□□□□□ -0.72
SEMA4D-208ENST00000422704 SPAG17Q6Q759 2223 aa10.53□□□□□ -0.72
SEMA4D-208ENST00000422704 SMIM35A0A1B0GVV1 85 aa10.53□□□□□ -0.72
SEMA4D-208ENST00000422704 C22orf31O95567 290 aa10.53□□□□□ -0.72
SEMA4D-208ENST00000422704 TRBC1P01850 177 aa10.53□□□□□ -0.72
SEMA4D-208ENST00000422704 IFNA16P05015 189 aa10.53□□□□□ -0.72
SEMA4D-208ENST00000422704 SLC6A2P23975 617 aa10.53□□□□□ -0.72
SEMA4D-208ENST00000422704 POMZP3Q6PJE2 187 aa10.53□□□□□ -0.72
SEMA4D-208ENST00000422704 ZNF598Q86UK7 904 aaKnown RBP10.53□□□□□ -0.72
SEMA4D-208ENST00000422704 IPCEF1Q8WWN9 437 aaPredicted RBP10.53□□□□□ -0.72
SEMA4D-208ENST00000422704 ING5Q8WYH8 240 aa10.53□□□□□ -0.72
SEMA4D-208ENST00000422704 USP7Q93009 1102 aa10.53□□□□□ -0.72
SEMA4D-208ENST00000422704 MAML3Q96JK9 1138 aa10.53□□□□□ -0.72
SEMA4D-208ENST00000422704 MRPL39Q9NYK5 338 aaKnown RBP10.53□□□□□ -0.72
SEMA4D-208ENST00000422704 TBC1D30Q9Y2I9 924 aa10.53□□□□□ -0.72
SEMA4D-208ENST00000422704 MYOCOSA0A1B0GUC4 107 aa10.52□□□□□ -0.72
SEMA4D-208ENST00000422704 SAP18O00422 153 aaKnown RBP10.52□□□□□ -0.72
SEMA4D-208ENST00000422704 NRP1O14786 923 aa10.52□□□□□ -0.72
SEMA4D-208ENST00000422704 TRMUO75648 421 aaKnown RBP10.52□□□□□ -0.72
SEMA4D-208ENST00000422704 HLA-DQA2P01906 255 aa10.52□□□□□ -0.72
SEMA4D-208ENST00000422704 IL6P05231 212 aa10.52□□□□□ -0.72
SEMA4D-208ENST00000422704 ELFN1P0C7U0 828 aa10.52□□□□□ -0.72
SEMA4D-208ENST00000422704 PTPN9P43378 593 aa10.52□□□□□ -0.72
SEMA4D-208ENST00000422704 KIR3DL1P43629 444 aa10.52□□□□□ -0.72
SEMA4D-208ENST00000422704 DGKQP52824 942 aa10.52□□□□□ -0.72
SEMA4D-208ENST00000422704 MANFP55145 182 aaKnown RBP10.52□□□□□ -0.72
SEMA4D-208ENST00000422704 GNA12Q03113 381 aa10.52□□□□□ -0.72
SEMA4D-208ENST00000422704 PTP4A2Q12974 167 aa10.52□□□□□ -0.72
SEMA4D-208ENST00000422704 MTAPQ13126 283 aa10.52□□□□□ -0.72
SEMA4D-208ENST00000422704 INTS6LQ5JSJ4 861 aaKnown RBP10.52□□□□□ -0.72
SEMA4D-208ENST00000422704 KIAA1324Q6UXG2 1013 aaKnown RBP10.52□□□□□ -0.72
SEMA4D-208ENST00000422704 SLCO6A1Q86UG4 719 aa10.52□□□□□ -0.72
SEMA4D-208ENST00000422704 KRT73Q86Y46 540 aa10.52□□□□□ -0.72
SEMA4D-208ENST00000422704 OR2T34Q8NGX1 318 aa10.52□□□□□ -0.72
SEMA4D-208ENST00000422704 OR2T3Q8NH03 318 aa10.52□□□□□ -0.72
SEMA4D-208ENST00000422704 AUTS2Q8WXX7 1259 aa10.52□□□□□ -0.72
SEMA4D-208ENST00000422704 C1GALT1C1Q96EU7 318 aa10.52□□□□□ -0.72
SEMA4D-208ENST00000422704 SCLYQ96I15 445 aa10.52□□□□□ -0.72
SEMA4D-208ENST00000422704 HNRNPABQ99729 332 aaKnown RBP10.52□□□□□ -0.72
SEMA4D-208ENST00000422704 LRTM1Q9HBL6 345 aa10.52□□□□□ -0.72
SEMA4D-208ENST00000422704 EXD2Q9NVH0 621 aa10.52□□□□□ -0.72
SEMA4D-208ENST00000422704 OSER1Q9NX31 292 aa10.52□□□□□ -0.72
SEMA4D-208ENST00000422704 PDP1Q9P0J1 537 aaPredicted RBP10.52□□□□□ -0.72
SEMA4D-208ENST00000422704 ZFP37Q9Y6Q3 630 aaPredicted RBP10.52□□□□□ -0.72
SEMA4D-208ENST00000422704 TRAFD1O14545 582 aaPredicted RBP10.52□□□□□ -0.73
SEMA4D-208ENST00000422704 SUV39H1O43463 412 aa10.52□□□□□ -0.73
SEMA4D-208ENST00000422704 RPP40O75818 363 aaKnown RBP10.52□□□□□ -0.73
SEMA4D-208ENST00000422704 CXCL14O95715 111 aa10.52□□□□□ -0.73
SEMA4D-208ENST00000422704 ENO2P09104 434 aaPredicted RBP10.52□□□□□ -0.73
SEMA4D-208ENST00000422704 TACR2P21452 398 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms