RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 TTC30BQ8N4P2 665 aa9.16□□□□□ -0.94
NUP50-206ENST00000422489 ZSCAN1Q8NBB4 408 aa9.16□□□□□ -0.94
NUP50-206ENST00000422489 ACRBPQ8NEB7 543 aa9.16□□□□□ -0.94
NUP50-206ENST00000422489 ACTL9Q8TC94 416 aa9.16□□□□□ -0.94
NUP50-206ENST00000422489 MRGPRX2Q96LB1 330 aa9.16□□□□□ -0.94
NUP50-206ENST00000422489 CTRCQ99895 268 aa9.16□□□□□ -0.94
NUP50-206ENST00000422489 APOL2Q9BQE5 337 aa9.16□□□□□ -0.94
NUP50-206ENST00000422489 HERPUD2Q9BSE4 406 aa9.16□□□□□ -0.94
NUP50-206ENST00000422489 FICDQ9BVA6 458 aa9.16□□□□□ -0.94
NUP50-206ENST00000422489 FSD1LQ9BXM9 530 aa9.16□□□□□ -0.94
NUP50-206ENST00000422489 OSBPL8Q9BZF1 889 aa9.16□□□□□ -0.94
NUP50-206ENST00000422489 TRABDQ9H4I3 376 aa9.16□□□□□ -0.94
NUP50-206ENST00000422489 IL26Q9NPH9 171 aa9.16□□□□□ -0.94
NUP50-206ENST00000422489 HACD3Q9P035 362 aa9.16□□□□□ -0.94
NUP50-206ENST00000422489 SCHIP1Q9P0W5 487 aaPredicted RBP9.16□□□□□ -0.94
NUP50-206ENST00000422489 TMPRSS11EQ9UL52 423 aa9.16□□□□□ -0.94
NUP50-206ENST00000422489 PKP3Q9Y446 797 aa9.16□□□□□ -0.94
NUP50-206ENST00000422489 FREM2Q5SZK8 3169 aa9.16□□□□□ -0.94
NUP50-206ENST00000422489 NBEAQ8NFP9 2946 aa9.16□□□□□ -0.94
NUP50-206ENST00000422489 FAM208BQ5VWN6 2430 aa9.15□□□□□ -0.94
NUP50-206ENST00000422489 MYLKQ15746 1914 aa9.15□□□□□ -0.94
NUP50-206ENST00000422489 GLYATL1P3A0A0U1RQE8 302 aa9.15□□□□□ -0.94
NUP50-206ENST00000422489 CCDC66A2RUB6 948 aa9.15□□□□□ -0.94
NUP50-206ENST00000422489 C2orf81A6NN90 581 aa9.15□□□□□ -0.94
NUP50-206ENST00000422489 GPR89AB7ZAQ6 455 aa9.15□□□□□ -0.94
NUP50-206ENST00000422489 CHUKO15111 745 aa9.15□□□□□ -0.94
NUP50-206ENST00000422489 STX7O15400 261 aaKnown RBP9.15□□□□□ -0.94
NUP50-206ENST00000422489 KCNN4O15554 427 aa9.15□□□□□ -0.94
NUP50-206ENST00000422489 POP7O75817 140 aaKnown RBP9.15□□□□□ -0.94
NUP50-206ENST00000422489 ANXA9O76027 345 aa9.15□□□□□ -0.94
NUP50-206ENST00000422489 STK10O94804 968 aaKnown RBP9.15□□□□□ -0.94
NUP50-206ENST00000422489 GPR89BP0CG08 455 aa9.15□□□□□ -0.94
NUP50-206ENST00000422489 RBP3P10745 1247 aa9.15□□□□□ -0.94
NUP50-206ENST00000422489 THRAP10827 490 aa9.15□□□□□ -0.94
NUP50-206ENST00000422489 PYGMP11217 842 aa9.15□□□□□ -0.94
NUP50-206ENST00000422489 VCLP18206 1134 aa9.15□□□□□ -0.94
NUP50-206ENST00000422489 XRCC1P18887 633 aaPredicted RBP9.15□□□□□ -0.94
NUP50-206ENST00000422489 HLA-DPA1P20036 260 aa9.15□□□□□ -0.94
NUP50-206ENST00000422489 CTNNA1P35221 906 aaKnown RBP9.15□□□□□ -0.94
NUP50-206ENST00000422489 HMGCLP35914 325 aa9.15□□□□□ -0.94
NUP50-206ENST00000422489 SPAM1P38567 509 aa9.15□□□□□ -0.94
NUP50-206ENST00000422489 SLC19A1P41440 591 aa9.15□□□□□ -0.94
NUP50-206ENST00000422489 CLCNKAP51800 687 aa9.15□□□□□ -0.94
NUP50-206ENST00000422489 GEMP55040 296 aa9.15□□□□□ -0.94
NUP50-206ENST00000422489 PTPRCAPQ14761 206 aa9.15□□□□□ -0.94
NUP50-206ENST00000422489 KHDC1Q4VXA5 237 aaKnown RBP9.15□□□□□ -0.94
NUP50-206ENST00000422489 ANKRD20A2Q5SQ80 823 aa9.15□□□□□ -0.94
NUP50-206ENST00000422489 DCAF12Q5T6F0 453 aa9.15□□□□□ -0.94
NUP50-206ENST00000422489 ANKRD20A1Q5TYW2 823 aa9.15□□□□□ -0.94
NUP50-206ENST00000422489 ANKRD20A3Q5VUR7 823 aa9.15□□□□□ -0.94
NUP50-206ENST00000422489 ANKS6Q68DC2 871 aa9.15□□□□□ -0.94
NUP50-206ENST00000422489 ITPRIPL1Q6GPH6 555 aa9.15□□□□□ -0.94
NUP50-206ENST00000422489 TMEM220Q6QAJ8 160 aa9.15□□□□□ -0.94
NUP50-206ENST00000422489 PCSK4Q6UW60 755 aa9.15□□□□□ -0.94
NUP50-206ENST00000422489 ZNF605Q86T29 641 aa9.15□□□□□ -0.94
NUP50-206ENST00000422489 TRAPPC5Q8IUR0 188 aa9.15□□□□□ -0.94
NUP50-206ENST00000422489 CDKL3Q8IVW4 592 aaPredicted RBP9.15□□□□□ -0.94
NUP50-206ENST00000422489 SPC24Q8NBT2 197 aa9.15□□□□□ -0.94
NUP50-206ENST00000422489 ZNF398Q8TD17 642 aa9.15□□□□□ -0.94
NUP50-206ENST00000422489 BRSK1Q8TDC3 778 aa9.15□□□□□ -0.94
NUP50-206ENST00000422489 PMEPA1Q969W9 287 aa9.15□□□□□ -0.94
NUP50-206ENST00000422489 CXorf40BQ96DE9 158 aa9.15□□□□□ -0.94
NUP50-206ENST00000422489 SGF29Q96ES7 293 aa9.15□□□□□ -0.94
NUP50-206ENST00000422489 CALR3Q96L12 384 aaKnown RBP9.15□□□□□ -0.94
NUP50-206ENST00000422489 VPS35Q96QK1 796 aa9.15□□□□□ -0.94
NUP50-206ENST00000422489 BAG1Q99933 345 aaPredicted RBP9.15□□□□□ -0.94
NUP50-206ENST00000422489 ARHGAP9Q9BRR9 750 aa9.15□□□□□ -0.94
NUP50-206ENST00000422489 ASPSCR1Q9BZE9 553 aa9.15□□□□□ -0.94
NUP50-206ENST00000422489 LACRTQ9GZZ8 138 aa9.15□□□□□ -0.94
NUP50-206ENST00000422489 IL17CQ9P0M4 197 aa9.15□□□□□ -0.94
NUP50-206ENST00000422489 ZNF624Q9P2J8 865 aaPredicted RBP9.15□□□□□ -0.94
NUP50-206ENST00000422489 NFKBIL1Q9UBC1 381 aaPredicted RBP9.15□□□□□ -0.94
NUP50-206ENST00000422489 ACSL6Q9UKU0 697 aa9.15□□□□□ -0.94
NUP50-206ENST00000422489 AMFRQ9UKV5 643 aa9.15□□□□□ -0.94
NUP50-206ENST00000422489 ADGRG1Q9Y653 693 aa9.15□□□□□ -0.94
NUP50-206ENST00000422489 LRRK1Q38SD2 2015 aa9.14□□□□□ -0.95
NUP50-206ENST00000422489 A6NCN8 305 aa9.14□□□□□ -0.95
NUP50-206ENST00000422489 STMND1H3BQB6 276 aa9.14□□□□□ -0.95
NUP50-206ENST00000422489 UBXN7O94888 489 aa9.14□□□□□ -0.95
NUP50-206ENST00000422489 TJP3O95049 919 aa9.14□□□□□ -0.95
NUP50-206ENST00000422489 MSH3P20585 1137 aa9.14□□□□□ -0.95
NUP50-206ENST00000422489 CD82P27701 267 aa9.14□□□□□ -0.95
NUP50-206ENST00000422489 HALP42357 657 aa9.14□□□□□ -0.95
NUP50-206ENST00000422489 ATP1A2P50993 1020 aa9.14□□□□□ -0.95
NUP50-206ENST00000422489 CYP4F2P78329 520 aa9.14□□□□□ -0.95
NUP50-206ENST00000422489 TMPRSS15P98073 1019 aa9.14□□□□□ -0.95
NUP50-206ENST00000422489 MC2RQ01718 297 aa9.14□□□□□ -0.95
NUP50-206ENST00000422489 ITGA9Q13797 1035 aa9.14□□□□□ -0.95
NUP50-206ENST00000422489 SPARCL1Q14515 664 aa9.14□□□□□ -0.95
NUP50-206ENST00000422489 GSE1Q14687 1217 aa9.14□□□□□ -0.95
NUP50-206ENST00000422489 LDLRAP1Q5SW96 308 aa9.14□□□□□ -0.95
NUP50-206ENST00000422489 FNBP1LQ5T0N5 605 aa9.14□□□□□ -0.95
NUP50-206ENST00000422489 ZDHHC20Q5W0Z9 365 aa9.14□□□□□ -0.95
NUP50-206ENST00000422489 WDR74Q6RFH5 385 aaPredicted RBP9.14□□□□□ -0.95
NUP50-206ENST00000422489 ABRAXAS1Q6UWZ7 409 aa9.14□□□□□ -0.95
NUP50-206ENST00000422489 TMEM26Q6ZUK4 368 aa9.14□□□□□ -0.95
NUP50-206ENST00000422489 DET1Q7L5Y6 550 aa9.14□□□□□ -0.95
NUP50-206ENST00000422489 PEX26Q7Z412 305 aa9.14□□□□□ -0.95
NUP50-206ENST00000422489 ARHGAP22Q7Z5H3 698 aa9.14□□□□□ -0.95
NUP50-206ENST00000422489 AMZ2Q86W34 360 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms