RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 PLEKHG4BQ96PX9 1271 aa13.21□□□□□ -0.29
MCF2L-213ENST00000421756 KCTD14Q9BQ13 255 aaPredicted RBP13.21□□□□□ -0.29
MCF2L-213ENST00000421756 ZNF385DQ9H6B1 395 aa13.21□□□□□ -0.29
MCF2L-213ENST00000421756 SYTL2Q9HCH5 934 aa13.21□□□□□ -0.29
MCF2L-213ENST00000421756 SRRDQ9UH36 339 aa13.21□□□□□ -0.29
MCF2L-213ENST00000421756 ASB3Q9Y575 518 aa13.21□□□□□ -0.29
MCF2L-213ENST00000421756 MYO15AQ9UKN7 3530 aa13.21□□□□□ -0.29
MCF2L-213ENST00000421756 OR6C75A6NL08 312 aa13.21□□□□□ -0.29
MCF2L-213ENST00000421756 CYBBP04839 570 aa13.21□□□□□ -0.29
MCF2L-213ENST00000421756 G6PDP11413 515 aa13.21□□□□□ -0.29
MCF2L-213ENST00000421756 DNAJB13P59910 316 aa13.21□□□□□ -0.29
MCF2L-213ENST00000421756 ZNF33AQ06730 810 aa13.21□□□□□ -0.29
MCF2L-213ENST00000421756 BOP1Q14137 746 aaKnown RBP13.21□□□□□ -0.29
MCF2L-213ENST00000421756 UGT3A2Q3SY77 523 aa13.21□□□□□ -0.29
MCF2L-213ENST00000421756 ZNF648Q5T619 568 aaPredicted RBP13.21□□□□□ -0.29
MCF2L-213ENST00000421756 HMBOX1Q6NT76 420 aa13.21□□□□□ -0.29
MCF2L-213ENST00000421756 LETMD1Q6P1Q0 360 aa13.21□□□□□ -0.29
MCF2L-213ENST00000421756 NCLNQ969V3 563 aa13.21□□□□□ -0.29
MCF2L-213ENST00000421756 EID2BQ96D98 161 aa13.21□□□□□ -0.29
MCF2L-213ENST00000421756 TMEM169Q96HH4 297 aa13.21□□□□□ -0.29
MCF2L-213ENST00000421756 EXD2Q9NVH0 621 aa13.21□□□□□ -0.29
MCF2L-213ENST00000421756 TRIM17Q9Y577 477 aa13.21□□□□□ -0.29
MCF2L-213ENST00000421756 PRSS21Q9Y6M0 314 aa13.21□□□□□ -0.29
MCF2L-213ENST00000421756 TSC2P49815 1807 aa13.21□□□□□ -0.3
MCF2L-213ENST00000421756 DHRS12A0PJE2 317 aa13.21□□□□□ -0.3
MCF2L-213ENST00000421756 SYN3O14994 580 aa13.21□□□□□ -0.3
MCF2L-213ENST00000421756 B4GAT1O43505 415 aa13.21□□□□□ -0.3
MCF2L-213ENST00000421756 ACRP10323 421 aa13.21□□□□□ -0.3
MCF2L-213ENST00000421756 YBEYP58557 167 aaPredicted RBP13.21□□□□□ -0.3
MCF2L-213ENST00000421756 ZXDBP98169 803 aa13.21□□□□□ -0.3
MCF2L-213ENST00000421756 LIPEQ05469 1076 aa13.21□□□□□ -0.3
MCF2L-213ENST00000421756 SF1Q15637 639 aaKnown RBP13.21□□□□□ -0.3
MCF2L-213ENST00000421756 MYLK3Q32MK0 819 aa13.21□□□□□ -0.3
MCF2L-213ENST00000421756 SETMARQ53H47 684 aaPredicted RBP13.21□□□□□ -0.3
MCF2L-213ENST00000421756 DNAJB7Q7Z6W7 309 aaPredicted RBP13.21□□□□□ -0.3
MCF2L-213ENST00000421756 HS6ST3Q8IZP7 471 aa13.21□□□□□ -0.3
MCF2L-213ENST00000421756 SEPT8Q92599 483 aa13.21□□□□□ -0.3
MCF2L-213ENST00000421756 ULK4Q96C45 1275 aa13.21□□□□□ -0.3
MCF2L-213ENST00000421756 LRRC58Q96CX6 371 aa13.21□□□□□ -0.3
MCF2L-213ENST00000421756 MAELQ96JY0 434 aaKnown RBP13.21□□□□□ -0.3
MCF2L-213ENST00000421756 FAR2Q96K12 515 aa13.21□□□□□ -0.3
MCF2L-213ENST00000421756 PSKH2Q96QS6 385 aa13.21□□□□□ -0.3
MCF2L-213ENST00000421756 CLPBQ9H078 707 aa13.21□□□□□ -0.3
MCF2L-213ENST00000421756 WWOXQ9NZC7 414 aa13.21□□□□□ -0.3
MCF2L-213ENST00000421756 ATP11BQ9Y2G3 1177 aa13.21□□□□□ -0.3
MCF2L-213ENST00000421756 GREB1Q4ZG55 1949 aa13.2□□□□□ -0.3
MCF2L-213ENST00000421756 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.2□□□□□ -0.3
MCF2L-213ENST00000421756 CTSOP43234 321 aaPredicted RBP13.2□□□□□ -0.3
MCF2L-213ENST00000421756 IKBKEQ14164 716 aa13.2□□□□□ -0.3
MCF2L-213ENST00000421756 GPNMBQ14956 572 aa13.2□□□□□ -0.3
MCF2L-213ENST00000421756 TGFBIQ15582 683 aa13.2□□□□□ -0.3
MCF2L-213ENST00000421756 CTSL3PQ5NE16 218 aa13.2□□□□□ -0.3
MCF2L-213ENST00000421756 ARMC3Q5W041 872 aa13.2□□□□□ -0.3
MCF2L-213ENST00000421756 GPRIN3Q6ZVF9 776 aa13.2□□□□□ -0.3
MCF2L-213ENST00000421756 GALNT10Q86SR1 603 aa13.2□□□□□ -0.3
MCF2L-213ENST00000421756 SERPINA9Q86WD7 417 aa13.2□□□□□ -0.3
MCF2L-213ENST00000421756 LRRC49Q8IUZ0 686 aa13.2□□□□□ -0.3
MCF2L-213ENST00000421756 TMEM102Q8N9M5 508 aaPredicted RBP13.2□□□□□ -0.3
MCF2L-213ENST00000421756 EFHD1Q9BUP0 239 aa13.2□□□□□ -0.3
MCF2L-213ENST00000421756 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.2□□□□□ -0.3
MCF2L-213ENST00000421756 UNCXA6NJT0 531 aa13.2□□□□□ -0.3
MCF2L-213ENST00000421756 TFAP2AP05549 437 aa13.2□□□□□ -0.3
MCF2L-213ENST00000421756 ERVPABLB-1P60509 514 aa13.2□□□□□ -0.3
MCF2L-213ENST00000421756 RHDQ02161 417 aa13.2□□□□□ -0.3
MCF2L-213ENST00000421756 PRKCQQ04759 706 aa13.2□□□□□ -0.3
MCF2L-213ENST00000421756 SELPLGQ14242 412 aa13.2□□□□□ -0.3
MCF2L-213ENST00000421756 ATP6AP1LQ52LC2 224 aa13.2□□□□□ -0.3
MCF2L-213ENST00000421756 ZNF697Q5TEC3 545 aa13.2□□□□□ -0.3
MCF2L-213ENST00000421756 ANKRD34AQ69YU3 496 aa13.2□□□□□ -0.3
MCF2L-213ENST00000421756 TRAF7Q6Q0C0 670 aa13.2□□□□□ -0.3
MCF2L-213ENST00000421756 AFTPHQ6ULP2 937 aa13.2□□□□□ -0.3
MCF2L-213ENST00000421756 FAM126BQ8IXS8 530 aa13.2□□□□□ -0.3
MCF2L-213ENST00000421756 PHACTR4Q8IZ21 702 aa13.2□□□□□ -0.3
MCF2L-213ENST00000421756 HS3ST5Q8IZT8 346 aa13.2□□□□□ -0.3
MCF2L-213ENST00000421756 FOXJ1Q92949 421 aa13.2□□□□□ -0.3
MCF2L-213ENST00000421756 BIRC8Q96P09 236 aa13.2□□□□□ -0.3
MCF2L-213ENST00000421756 HIPK3Q9H422 1215 aa13.2□□□□□ -0.3
MCF2L-213ENST00000421756 IPPKQ9H8X2 491 aa13.2□□□□□ -0.3
MCF2L-213ENST00000421756 ZDHHC4Q9NPG8 344 aa13.2□□□□□ -0.3
MCF2L-213ENST00000421756 VPS51Q9UID3 782 aa13.2□□□□□ -0.3
MCF2L-213ENST00000421756 RALGAPA2Q2PPJ7 1873 aa13.2□□□□□ -0.3
MCF2L-213ENST00000421756 EI24O14681 340 aa13.2□□□□□ -0.3
MCF2L-213ENST00000421756 GABRR2P28476 465 aa13.2□□□□□ -0.3
MCF2L-213ENST00000421756 BIRC2Q13490 618 aa13.2□□□□□ -0.3
MCF2L-213ENST00000421756 RBBP5Q15291 538 aaKnown RBP13.2□□□□□ -0.3
MCF2L-213ENST00000421756 PHKG1Q16816 387 aa13.2□□□□□ -0.3
MCF2L-213ENST00000421756 IMPG1Q17R60 797 aa13.2□□□□□ -0.3
MCF2L-213ENST00000421756 AP5B1Q2VPB7 878 aa13.2□□□□□ -0.3
MCF2L-213ENST00000421756 GTDC1Q4AE62 458 aa13.2□□□□□ -0.3
MCF2L-213ENST00000421756 CMTM8Q8IZV2 173 aa13.2□□□□□ -0.3
MCF2L-213ENST00000421756 PDZD8Q8NEN9 1154 aa13.2□□□□□ -0.3
MCF2L-213ENST00000421756 ZFP28Q8NHY6 868 aa13.2□□□□□ -0.3
MCF2L-213ENST00000421756 ADGRE3Q9BY15 652 aa13.2□□□□□ -0.3
MCF2L-213ENST00000421756 MRM3Q9HC36 420 aaKnown RBP13.2□□□□□ -0.3
MCF2L-213ENST00000421756 DRGXA6NNA5 263 aa13.19□□□□□ -0.3
MCF2L-213ENST00000421756 TMX2-CTNND1H3BSU7 103 aa13.19□□□□□ -0.3
MCF2L-213ENST00000421756 ARVCFO00192 962 aa13.19□□□□□ -0.3
MCF2L-213ENST00000421756 SLC6A2P23975 617 aa13.19□□□□□ -0.3
MCF2L-213ENST00000421756 GSSP48637 474 aa13.19□□□□□ -0.3
MCF2L-213ENST00000421756 NEDD8Q15843 81 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms