RNA–Protein interactions for RNA: ENST00000420013.5

MCF2L-212, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-212ENST00000420013 ARFGAP3Q9NP61 516 aa20.08■□□□□ 0.81
MCF2L-212ENST00000420013 WASH6PQ9NQA3 447 aa20.08■□□□□ 0.81
MCF2L-212ENST00000420013 PRDM8Q9NQV8 689 aa20.08■□□□□ 0.81
MCF2L-212ENST00000420013 PILRAQ9UKJ1 303 aa20.08■□□□□ 0.81
MCF2L-212ENST00000420013 TMEM184BQ9Y519 407 aaPredicted RBP20.08■□□□□ 0.81
MCF2L-212ENST00000420013 FLNBO75369 2602 aaKnown RBP20.08■□□□□ 0.8
MCF2L-212ENST00000420013 SETXQ7Z333 2677 aaKnown RBP20.07■□□□□ 0.8
MCF2L-212ENST00000420013 LOC285095A0A1B0GVY8 99 aa20.07■□□□□ 0.8
MCF2L-212ENST00000420013 ZNF891A8MT65 544 aaPredicted RBP20.07■□□□□ 0.8
MCF2L-212ENST00000420013 PDZK1P1A8MUH7 402 aa20.07■□□□□ 0.8
MCF2L-212ENST00000420013 HACD1B0YJ81 288 aa20.07■□□□□ 0.8
MCF2L-212ENST00000420013 TOX3O15405 576 aaPredicted RBP20.07■□□□□ 0.8
MCF2L-212ENST00000420013 SLC28A2O43868 658 aa20.07■□□□□ 0.8
MCF2L-212ENST00000420013 KCNJ13O60928 360 aa20.07■□□□□ 0.8
MCF2L-212ENST00000420013 CDK14O94921 469 aa20.07■□□□□ 0.8
MCF2L-212ENST00000420013 VIPP01282 170 aa20.07■□□□□ 0.8
MCF2L-212ENST00000420013 C9P02748 559 aa20.07■□□□□ 0.8
MCF2L-212ENST00000420013 LIFP15018 202 aa20.07■□□□□ 0.8
MCF2L-212ENST00000420013 PECAM1P16284 738 aaPredicted RBP20.07■□□□□ 0.8
MCF2L-212ENST00000420013 NFKB1P19838 968 aa20.07■□□□□ 0.8
MCF2L-212ENST00000420013 HLA-DPA1P20036 260 aa20.07■□□□□ 0.8
MCF2L-212ENST00000420013 MAPK9P45984 424 aa20.07■□□□□ 0.8
MCF2L-212ENST00000420013 WASHC5Q12768 1159 aa20.07■□□□□ 0.8
MCF2L-212ENST00000420013 NFATC3Q12968 1075 aa20.07■□□□□ 0.8
MCF2L-212ENST00000420013 TBX2Q13207 712 aaPredicted RBP20.07■□□□□ 0.8
MCF2L-212ENST00000420013 TBR1Q16650 682 aa20.07■□□□□ 0.8
MCF2L-212ENST00000420013 KDELC1Q6UW63 502 aa20.07■□□□□ 0.8
MCF2L-212ENST00000420013 ABRAXAS1Q6UWZ7 409 aa20.07■□□□□ 0.8
MCF2L-212ENST00000420013 KATNAL2Q8IYT4 538 aa20.07■□□□□ 0.8
MCF2L-212ENST00000420013 BRSK1Q8TDC3 778 aa20.07■□□□□ 0.8
MCF2L-212ENST00000420013 JPH3Q8WXH2 748 aaPredicted RBP20.07■□□□□ 0.8
MCF2L-212ENST00000420013 P3H4Q92791 437 aa20.07■□□□□ 0.8
MCF2L-212ENST00000420013 KIAA1143Q96AT1 154 aaPredicted RBP20.07■□□□□ 0.8
MCF2L-212ENST00000420013 SLC45A3Q96JT2 553 aa20.07■□□□□ 0.8
MCF2L-212ENST00000420013 QKIQ96PU8 341 aaKnown RBP eCLIP20.07■□□□□ 0.8
MCF2L-212ENST00000420013 TBC1D10AQ9BXI6 508 aa20.07■□□□□ 0.8
MCF2L-212ENST00000420013 TRIM5Q9C035 493 aa20.07■□□□□ 0.8
MCF2L-212ENST00000420013 LUC7LQ9NQ29 371 aaKnown RBP20.07■□□□□ 0.8
MCF2L-212ENST00000420013 SIDT1Q9NXL6 827 aaKnown RBP20.07■□□□□ 0.8
MCF2L-212ENST00000420013 KLHL8Q9P2G9 620 aaPredicted RBP20.07■□□□□ 0.8
MCF2L-212ENST00000420013 HYOU1Q9Y4L1 999 aa20.07■□□□□ 0.8
MCF2L-212ENST00000420013 SPO11Q9Y5K1 396 aa20.07■□□□□ 0.8
MCF2L-212ENST00000420013 MYO18BQ8IUG5 2567 aa20.07■□□□□ 0.8
MCF2L-212ENST00000420013 hCG_1818297A0A087WSY0 165 aa20.06■□□□□ 0.8
MCF2L-212ENST00000420013 PPFIA2O75334 1257 aa20.06■□□□□ 0.8
MCF2L-212ENST00000420013 MAP4P27816 1152 aaKnown RBP20.06■□□□□ 0.8
MCF2L-212ENST00000420013 CD68P34810 354 aaPredicted RBP20.06■□□□□ 0.8
MCF2L-212ENST00000420013 SPAM1P38567 509 aa20.06■□□□□ 0.8
MCF2L-212ENST00000420013 WNT3AP56704 352 aa20.06■□□□□ 0.8
MCF2L-212ENST00000420013 ABHD18Q0P651 414 aa20.06■□□□□ 0.8
MCF2L-212ENST00000420013 MAP7Q14244 749 aa20.06■□□□□ 0.8
MCF2L-212ENST00000420013 PPP2R5EQ16537 467 aa20.06■□□□□ 0.8
MCF2L-212ENST00000420013 PLA2G4EQ3MJ16 856 aa20.06■□□□□ 0.8
MCF2L-212ENST00000420013 C11orf63Q6NUN7 778 aa20.06■□□□□ 0.8
MCF2L-212ENST00000420013 FCRL5Q96RD9 977 aa20.06■□□□□ 0.8
MCF2L-212ENST00000420013 SPRY4Q9C004 299 aa20.06■□□□□ 0.8
MCF2L-212ENST00000420013 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.06■□□□□ 0.8
MCF2L-212ENST00000420013 A8MU76 341 aa20.05■□□□□ 0.8
MCF2L-212ENST00000420013 UBXN7O94888 489 aa20.05■□□□□ 0.8
MCF2L-212ENST00000420013 ZRANB2O95218 330 aaKnown RBP eCLIP20.05■□□□□ 0.8
MCF2L-212ENST00000420013 FAM87AP0C7U9 286 aa20.05■□□□□ 0.8
MCF2L-212ENST00000420013 IDSP22304 550 aa20.05■□□□□ 0.8
MCF2L-212ENST00000420013 SLC19A1P41440 591 aa20.05■□□□□ 0.8
MCF2L-212ENST00000420013 CAPZBP47756 277 aa20.05■□□□□ 0.8
MCF2L-212ENST00000420013 MPP3Q13368 585 aa20.05■□□□□ 0.8
MCF2L-212ENST00000420013 ATP13A5Q4VNC0 1218 aa20.05■□□□□ 0.8
MCF2L-212ENST00000420013 ZNF648Q5T619 568 aaPredicted RBP20.05■□□□□ 0.8
MCF2L-212ENST00000420013 KAZNQ674X7 775 aa20.05■□□□□ 0.8
MCF2L-212ENST00000420013 CYB5D1Q6P9G0 228 aa20.05■□□□□ 0.8
MCF2L-212ENST00000420013 BORAQ6PGQ7 559 aa20.05■□□□□ 0.8
MCF2L-212ENST00000420013 SARM1Q6SZW1 724 aa20.05■□□□□ 0.8
MCF2L-212ENST00000420013 TRAPPC5Q8IUR0 188 aa20.05■□□□□ 0.8
MCF2L-212ENST00000420013 ZNF547Q8IVP9 402 aa20.05■□□□□ 0.8
MCF2L-212ENST00000420013 TTC30BQ8N4P2 665 aa20.05■□□□□ 0.8
MCF2L-212ENST00000420013 C9orf72Q96LT7 481 aa20.05■□□□□ 0.8
MCF2L-212ENST00000420013 GEMIN8Q9NWZ8 242 aaKnown RBP20.05■□□□□ 0.8
MCF2L-212ENST00000420013 UBP1Q9NZI7 540 aa20.05■□□□□ 0.8
MCF2L-212ENST00000420013 SLC23A2Q9UGH3 650 aa20.05■□□□□ 0.8
MCF2L-212ENST00000420013 TUBD1Q9UJT1 453 aa20.05■□□□□ 0.8
MCF2L-212ENST00000420013 TRHDEQ9UKU6 1024 aa20.05■□□□□ 0.8
MCF2L-212ENST00000420013 ALG6Q9Y672 507 aa20.05■□□□□ 0.8
MCF2L-212ENST00000420013 AURKAO14965 403 aa20.04■□□□□ 0.8
MCF2L-212ENST00000420013 POLR1CO15160 346 aaPredicted RBP20.04■□□□□ 0.8
MCF2L-212ENST00000420013 MTX2O75431 263 aa20.04■□□□□ 0.8
MCF2L-212ENST00000420013 STK17BO94768 372 aa20.04■□□□□ 0.8
MCF2L-212ENST00000420013 LCA5LO95447 670 aa20.04■□□□□ 0.8
MCF2L-212ENST00000420013 DLGAP3O95886 979 aa20.04■□□□□ 0.8
MCF2L-212ENST00000420013 ITGB6P18564 788 aa20.04■□□□□ 0.8
MCF2L-212ENST00000420013 HALP42357 657 aa20.04■□□□□ 0.8
MCF2L-212ENST00000420013 MAGEA1P43355 309 aa20.04■□□□□ 0.8
MCF2L-212ENST00000420013 DMPKQ09013 629 aa20.04■□□□□ 0.8
MCF2L-212ENST00000420013 ITGA9Q13797 1035 aa20.04■□□□□ 0.8
MCF2L-212ENST00000420013 KHDC1Q4VXA5 237 aaKnown RBP20.04■□□□□ 0.8
MCF2L-212ENST00000420013 SIRPB2Q5JXA9 342 aa20.04■□□□□ 0.8
MCF2L-212ENST00000420013 LDLRAP1Q5SW96 308 aa20.04■□□□□ 0.8
MCF2L-212ENST00000420013 PRICKLE2Q7Z3G6 844 aa20.04■□□□□ 0.8
MCF2L-212ENST00000420013 GLT6D1Q7Z4J2 308 aa20.04■□□□□ 0.8
MCF2L-212ENST00000420013 C11orf96Q7Z7L8 435 aa20.04■□□□□ 0.8
MCF2L-212ENST00000420013 CCDC170Q8IYT3 715 aa20.04■□□□□ 0.8
MCF2L-212ENST00000420013 ZNF567Q8N184 647 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms