RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 LRRD1A4D1F6 860 aa6.95□□□□□ -1.3
HMGN1-205ENST00000419378 IGLON5A6NGN9 336 aa6.95□□□□□ -1.3
HMGN1-205ENST00000419378 A6NNZ2 444 aa6.95□□□□□ -1.3
HMGN1-205ENST00000419378 HGSO14964 777 aaPredicted RBP6.95□□□□□ -1.3
HMGN1-205ENST00000419378 RAD51BO15315 384 aa6.95□□□□□ -1.3
HMGN1-205ENST00000419378 MAFKO60675 156 aa6.95□□□□□ -1.3
HMGN1-205ENST00000419378 MAGEC1O60732 1142 aa6.95□□□□□ -1.3
HMGN1-205ENST00000419378 PAK4O96013 591 aaPredicted RBP6.95□□□□□ -1.3
HMGN1-205ENST00000419378 THEGLP0DJG4 465 aa6.95□□□□□ -1.3
HMGN1-205ENST00000419378 CPEP16870 476 aa6.95□□□□□ -1.3
HMGN1-205ENST00000419378 CR2P20023 1033 aa6.95□□□□□ -1.3
HMGN1-205ENST00000419378 XPAP23025 273 aaPredicted RBP6.95□□□□□ -1.3
HMGN1-205ENST00000419378 EPHA8P29322 1005 aaPredicted RBP6.95□□□□□ -1.3
HMGN1-205ENST00000419378 SERPINA4P29622 427 aa6.95□□□□□ -1.3
HMGN1-205ENST00000419378 HSPA9P38646 679 aaKnown RBP6.95□□□□□ -1.3
HMGN1-205ENST00000419378 GRK6P43250 576 aa6.95□□□□□ -1.3
HMGN1-205ENST00000419378 ARRB1P49407 418 aaPredicted RBP6.95□□□□□ -1.3
HMGN1-205ENST00000419378 SUOXP51687 545 aa6.95□□□□□ -1.3
HMGN1-205ENST00000419378 CLDN2P57739 230 aa6.95□□□□□ -1.3
HMGN1-205ENST00000419378 AP1S1P61966 158 aa6.95□□□□□ -1.3
HMGN1-205ENST00000419378 GBE1Q04446 702 aa6.95□□□□□ -1.3
HMGN1-205ENST00000419378 BCL2L1Q07817 233 aa6.95□□□□□ -1.3
HMGN1-205ENST00000419378 NSUN2Q08J23 767 aaKnown RBP eCLIP6.95□□□□□ -1.3
HMGN1-205ENST00000419378 GALNT2Q10471 571 aa6.95□□□□□ -1.3
HMGN1-205ENST00000419378 SGCGQ13326 291 aa6.95□□□□□ -1.3
HMGN1-205ENST00000419378 GRM3Q14832 879 aa6.95□□□□□ -1.3
HMGN1-205ENST00000419378 PAFAH1B3Q15102 231 aaKnown RBP6.95□□□□□ -1.3
HMGN1-205ENST00000419378 TRIP6Q15654 476 aaKnown RBP6.95□□□□□ -1.3
HMGN1-205ENST00000419378 UGP2Q16851 508 aa6.95□□□□□ -1.3
HMGN1-205ENST00000419378 INAVAQ3KP66 663 aa6.95□□□□□ -1.3
HMGN1-205ENST00000419378 ANKRD20A8PQ5CZ79 823 aa6.95□□□□□ -1.3
HMGN1-205ENST00000419378 ZFYVE27Q5T4F4 411 aa6.95□□□□□ -1.3
HMGN1-205ENST00000419378 CFAP58Q5T655 872 aa6.95□□□□□ -1.3
HMGN1-205ENST00000419378 BRAT1Q6PJG6 821 aa6.95□□□□□ -1.3
HMGN1-205ENST00000419378 KYAT3Q6YP21 454 aaKnown RBP6.95□□□□□ -1.3
HMGN1-205ENST00000419378 KDM7AQ6ZMT4 941 aa6.95□□□□□ -1.3
HMGN1-205ENST00000419378 LHFPL2Q6ZUX7 228 aa6.95□□□□□ -1.3
HMGN1-205ENST00000419378 CBLL1Q75N03 491 aa6.95□□□□□ -1.3
HMGN1-205ENST00000419378 PTAR1Q7Z6K3 402 aaPredicted RBP6.95□□□□□ -1.3
HMGN1-205ENST00000419378 GLRX5Q86SX6 157 aa6.95□□□□□ -1.3
HMGN1-205ENST00000419378 TTC7BQ86TV6 843 aa6.95□□□□□ -1.3
HMGN1-205ENST00000419378 GATAD2AQ86YP4 633 aa6.95□□□□□ -1.3
HMGN1-205ENST00000419378 DCP2Q8IU60 420 aaKnown RBP6.95□□□□□ -1.3
HMGN1-205ENST00000419378 CAMK1DQ8IU85 385 aa6.95□□□□□ -1.3
HMGN1-205ENST00000419378 MAP7D3Q8IWC1 876 aa6.95□□□□□ -1.3
HMGN1-205ENST00000419378 RBM12BQ8IXT5 1001 aaKnown RBP6.95□□□□□ -1.3
HMGN1-205ENST00000419378 CCDC170Q8IYT3 715 aa6.95□□□□□ -1.3
HMGN1-205ENST00000419378 SLC22A18ASQ8N1D0 253 aa6.95□□□□□ -1.3
HMGN1-205ENST00000419378 PGBD5Q8N414 524 aa6.95□□□□□ -1.3
HMGN1-205ENST00000419378 PQLC3Q8N755 202 aa6.95□□□□□ -1.3
HMGN1-205ENST00000419378 DENND6BQ8NEG7 585 aa6.95□□□□□ -1.3
HMGN1-205ENST00000419378 CXorf40AQ8TE69 158 aa6.95□□□□□ -1.3
HMGN1-205ENST00000419378 SAP25Q8TEE9 199 aa6.95□□□□□ -1.3
HMGN1-205ENST00000419378 RAPGEF5Q92565 580 aa6.95□□□□□ -1.3
HMGN1-205ENST00000419378 ECHDC3Q96DC8 303 aa6.95□□□□□ -1.3
HMGN1-205ENST00000419378 NSMCE3Q96MG7 304 aa6.95□□□□□ -1.3
HMGN1-205ENST00000419378 ZNF641Q96N77 438 aaPredicted RBP6.95□□□□□ -1.3
HMGN1-205ENST00000419378 PANX2Q96RD6 677 aa6.95□□□□□ -1.3
HMGN1-205ENST00000419378 KLF6Q99612 283 aaPredicted RBP6.95□□□□□ -1.3
HMGN1-205ENST00000419378 MGME1Q9BQP7 344 aa6.95□□□□□ -1.3
HMGN1-205ENST00000419378 WRAP53Q9BUR4 548 aaKnown RBP6.95□□□□□ -1.3
HMGN1-205ENST00000419378 SLC17A9Q9BYT1 436 aa6.95□□□□□ -1.3
HMGN1-205ENST00000419378 CD244Q9BZW8 370 aa6.95□□□□□ -1.3
HMGN1-205ENST00000419378 ANGPTL2Q9UKU9 493 aa6.95□□□□□ -1.3
HMGN1-205ENST00000419378 TFR2Q9UP52 801 aa6.95□□□□□ -1.3
HMGN1-205ENST00000419378 WASF3Q9UPY6 502 aa6.95□□□□□ -1.3
HMGN1-205ENST00000419378 ANKRD36A6QL64 1941 aa6.95□□□□□ -1.3
HMGN1-205ENST00000419378 SHROOM3Q8TF72 1996 aa6.95□□□□□ -1.3
HMGN1-205ENST00000419378 POM121BA6NF01 834 aa6.94□□□□□ -1.3
HMGN1-205ENST00000419378 C3orf70A6NLC5 250 aaPredicted RBP6.94□□□□□ -1.3
HMGN1-205ENST00000419378 NUDT19A8MXV4 375 aa6.94□□□□□ -1.3
HMGN1-205ENST00000419378 ZNF487B1APH4 448 aa6.94□□□□□ -1.3
HMGN1-205ENST00000419378 TRAFD1O14545 582 aaPredicted RBP6.94□□□□□ -1.3
HMGN1-205ENST00000419378 FPGTO14772 594 aa6.94□□□□□ -1.3
HMGN1-205ENST00000419378 SPOPO43791 374 aa6.94□□□□□ -1.3
HMGN1-205ENST00000419378 SDC3O75056 442 aa6.94□□□□□ -1.3
HMGN1-205ENST00000419378 KRT37O76014 449 aa6.94□□□□□ -1.3
HMGN1-205ENST00000419378 KRT1P04264 644 aa6.94□□□□□ -1.3
HMGN1-205ENST00000419378 PRKCGP05129 697 aa6.94□□□□□ -1.3
HMGN1-205ENST00000419378 FTH1P19P0C7X4 201 aa6.94□□□□□ -1.3
HMGN1-205ENST00000419378 BPIP17213 487 aa6.94□□□□□ -1.3
HMGN1-205ENST00000419378 COMTP21964 271 aa6.94□□□□□ -1.3
HMGN1-205ENST00000419378 KDELR1P24390 212 aa6.94□□□□□ -1.3
HMGN1-205ENST00000419378 CYLC1P35663 651 aaPredicted RBP6.94□□□□□ -1.3
HMGN1-205ENST00000419378 MMP12P39900 470 aa6.94□□□□□ -1.3
HMGN1-205ENST00000419378 GARSP41250 739 aaKnown RBP6.94□□□□□ -1.3
HMGN1-205ENST00000419378 SLC1A1P43005 524 aa6.94□□□□□ -1.3
HMGN1-205ENST00000419378 MAGEA1P43355 309 aa6.94□□□□□ -1.3
HMGN1-205ENST00000419378 MMP13P45452 471 aa6.94□□□□□ -1.3
HMGN1-205ENST00000419378 RXRGP48443 463 aa6.94□□□□□ -1.3
HMGN1-205ENST00000419378 RENBPP51606 427 aa6.94□□□□□ -1.3
HMGN1-205ENST00000419378 HADHBP55084 474 aaKnown RBP6.94□□□□□ -1.3
HMGN1-205ENST00000419378 ERVFRD-1P60508 538 aa6.94□□□□□ -1.3
HMGN1-205ENST00000419378 IL2P60568 153 aa6.94□□□□□ -1.3
HMGN1-205ENST00000419378 MAXP61244 160 aa6.94□□□□□ -1.3
HMGN1-205ENST00000419378 SHC2P98077 582 aa6.94□□□□□ -1.3
HMGN1-205ENST00000419378 SEMG2Q02383 582 aa6.94□□□□□ -1.3
HMGN1-205ENST00000419378 ELP6Q0PNE2 266 aa6.94□□□□□ -1.3
HMGN1-205ENST00000419378 SPA17Q15506 151 aa6.94□□□□□ -1.3
HMGN1-205ENST00000419378 TMEM52BQ4KMG9 183 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms