RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 DNAJC1Q96KC8 554 aaKnown RBP10.39□□□□□ -0.75
RFC1-203ENST00000418436 OR2AG1Q9H205 316 aa10.39□□□□□ -0.75
RFC1-203ENST00000418436 UGT1A7Q9HAW7 530 aa10.39□□□□□ -0.75
RFC1-203ENST00000418436 UGT1A10Q9HAW8 530 aa10.39□□□□□ -0.75
RFC1-203ENST00000418436 UGT1A8Q9HAW9 530 aa10.39□□□□□ -0.75
RFC1-203ENST00000418436 ARFGAP3Q9NP61 516 aa10.39□□□□□ -0.75
RFC1-203ENST00000418436 SPATS2LQ9NUQ6 558 aaKnown RBP10.39□□□□□ -0.75
RFC1-203ENST00000418436 PIH1D1Q9NWS0 290 aaKnown RBP10.39□□□□□ -0.75
RFC1-203ENST00000418436 RNF14Q9UBS8 474 aa10.39□□□□□ -0.75
RFC1-203ENST00000418436 PCYOX1Q9UHG3 505 aa10.39□□□□□ -0.75
RFC1-203ENST00000418436 ZNHIT2Q9UHR6 403 aa10.39□□□□□ -0.75
RFC1-203ENST00000418436 RIMKLBQ9ULI2 386 aa10.39□□□□□ -0.75
RFC1-203ENST00000418436 GPR34Q9UPC5 381 aa10.39□□□□□ -0.75
RFC1-203ENST00000418436 DOLKQ9UPQ8 538 aa10.39□□□□□ -0.75
RFC1-203ENST00000418436 PLEKHM1Q9Y4G2 1056 aa10.39□□□□□ -0.75
RFC1-203ENST00000418436 GPSM3Q9Y4H4 160 aa10.39□□□□□ -0.75
RFC1-203ENST00000418436 GOLGA4Q13439 2230 aaKnown RBP10.39□□□□□ -0.75
RFC1-203ENST00000418436 TCRBV7S3A2A0A539 114 aa10.38□□□□□ -0.75
RFC1-203ENST00000418436 AP3B1O00203 1094 aa10.38□□□□□ -0.75
RFC1-203ENST00000418436 GPR39O43194 453 aa10.38□□□□□ -0.75
RFC1-203ENST00000418436 GRID2O43424 1007 aa10.38□□□□□ -0.75
RFC1-203ENST00000418436 NOBOXO60393 691 aa10.38□□□□□ -0.75
RFC1-203ENST00000418436 ZIC2O95409 532 aaPredicted RBP10.38□□□□□ -0.75
RFC1-203ENST00000418436 PRAMEF1O95521 474 aa10.38□□□□□ -0.75
RFC1-203ENST00000418436 TOP3BO95985 862 aaKnown RBP10.38□□□□□ -0.75
RFC1-203ENST00000418436 GAS8O95995 478 aa10.38□□□□□ -0.75
RFC1-203ENST00000418436 ADRA1DP25100 572 aa10.38□□□□□ -0.75
RFC1-203ENST00000418436 AK4P27144 223 aaPredicted RBP10.38□□□□□ -0.75
RFC1-203ENST00000418436 CLCNKAP51800 687 aa10.38□□□□□ -0.75
RFC1-203ENST00000418436 BASP1P80723 227 aaKnown RBP10.38□□□□□ -0.75
RFC1-203ENST00000418436 TMPRSS15P98073 1019 aa10.38□□□□□ -0.75
RFC1-203ENST00000418436 ACVR1Q04771 509 aa10.38□□□□□ -0.75
RFC1-203ENST00000418436 TMEM115Q12893 351 aaPredicted RBP10.38□□□□□ -0.75
RFC1-203ENST00000418436 GPS1Q13098 491 aa10.38□□□□□ -0.75
RFC1-203ENST00000418436 NFATC2Q13469 925 aa10.38□□□□□ -0.75
RFC1-203ENST00000418436 LAMB3Q13751 1172 aa10.38□□□□□ -0.75
RFC1-203ENST00000418436 NR0B2Q15466 257 aa10.38□□□□□ -0.75
RFC1-203ENST00000418436 TCEA2Q15560 299 aa10.38□□□□□ -0.75
RFC1-203ENST00000418436 TRIP13Q15645 432 aaPredicted RBP10.38□□□□□ -0.75
RFC1-203ENST00000418436 SMAD1Q15797 465 aaKnown RBP10.38□□□□□ -0.75
RFC1-203ENST00000418436 LDLRAP1Q5SW96 308 aa10.38□□□□□ -0.75
RFC1-203ENST00000418436 GPRC6AQ5T6X5 926 aa10.38□□□□□ -0.75
RFC1-203ENST00000418436 LRRC8BQ6P9F7 803 aa10.38□□□□□ -0.75
RFC1-203ENST00000418436 ZNF534Q76KX8 674 aa10.38□□□□□ -0.75
RFC1-203ENST00000418436 TMPRSS7Q7RTY8 843 aa10.38□□□□□ -0.75
RFC1-203ENST00000418436 ZNF547Q8IVP9 402 aa10.38□□□□□ -0.75
RFC1-203ENST00000418436 CHCHD4Q8N4Q1 142 aa10.38□□□□□ -0.75
RFC1-203ENST00000418436 KYQ8NBH2 561 aa10.38□□□□□ -0.75
RFC1-203ENST00000418436 FAM46DQ8NEK8 389 aa10.38□□□□□ -0.75
RFC1-203ENST00000418436 GRK7Q8WTQ7 553 aa10.38□□□□□ -0.75
RFC1-203ENST00000418436 PEX13Q92968 403 aa10.38□□□□□ -0.75
RFC1-203ENST00000418436 ITPKCQ96DU7 683 aa10.38□□□□□ -0.75
RFC1-203ENST00000418436 CAPZA3Q96KX2 299 aa10.38□□□□□ -0.75
RFC1-203ENST00000418436 DDX47Q9H0S4 455 aaKnown RBP10.38□□□□□ -0.75
RFC1-203ENST00000418436 ASB8Q9H765 288 aa10.38□□□□□ -0.75
RFC1-203ENST00000418436 SUDS3Q9H7L9 328 aaPredicted RBP10.38□□□□□ -0.75
RFC1-203ENST00000418436 TAAR2Q9P1P5 351 aa10.38□□□□□ -0.75
RFC1-203ENST00000418436 PRKAB1Q9Y478 270 aa10.38□□□□□ -0.75
RFC1-203ENST00000418436 ASXL3Q9C0F0 2248 aa10.38□□□□□ -0.75
RFC1-203ENST00000418436 TRBV5-4A0A0C4DH59 114 aa10.37□□□□□ -0.75
RFC1-203ENST00000418436 HEATR9A2RTY3 570 aa10.37□□□□□ -0.75
RFC1-203ENST00000418436 PRR19A6NJB7 356 aa10.37□□□□□ -0.75
RFC1-203ENST00000418436 CCL22O00626 93 aa10.37□□□□□ -0.75
RFC1-203ENST00000418436 HYAL3O43820 417 aaPredicted RBP10.37□□□□□ -0.75
RFC1-203ENST00000418436 MTX2O75431 263 aa10.37□□□□□ -0.75
RFC1-203ENST00000418436 CDK14O94921 469 aa10.37□□□□□ -0.75
RFC1-203ENST00000418436 ECEL1O95672 775 aa10.37□□□□□ -0.75
RFC1-203ENST00000418436 MC4RP32245 332 aa10.37□□□□□ -0.75
RFC1-203ENST00000418436 ACTR1BP42025 376 aa10.37□□□□□ -0.75
RFC1-203ENST00000418436 PTGIRP43119 386 aa10.37□□□□□ -0.75
RFC1-203ENST00000418436 NPY2RP49146 381 aa10.37□□□□□ -0.75
RFC1-203ENST00000418436 VPS41P49754 854 aa10.37□□□□□ -0.75
RFC1-203ENST00000418436 RP1P56715 2156 aa10.37□□□□□ -0.75
RFC1-203ENST00000418436 ACTR1AP61163 376 aa10.37□□□□□ -0.75
RFC1-203ENST00000418436 E2F1Q01094 437 aa10.37□□□□□ -0.75
RFC1-203ENST00000418436 SEPT6Q14141 434 aa10.37□□□□□ -0.75
RFC1-203ENST00000418436 HLTFQ14527 1009 aaKnown RBP eCLIP10.37□□□□□ -0.755e-7■□□□□ 9.4
RFC1-203ENST00000418436 SKIDA1Q1XH10 827 aa10.37□□□□□ -0.75
RFC1-203ENST00000418436 GPR33Q49SQ1 333 aa10.37□□□□□ -0.75
RFC1-203ENST00000418436 C14orf28Q4W4Y0 310 aa10.37□□□□□ -0.75
RFC1-203ENST00000418436 CCDC38Q502W7 563 aa10.37□□□□□ -0.75
RFC1-203ENST00000418436 PCID2Q5JVF3 399 aa10.37□□□□□ -0.75
RFC1-203ENST00000418436 TSTD2Q5T7W7 516 aa10.37□□□□□ -0.75
RFC1-203ENST00000418436 MRPL14Q6P1L8 145 aaKnown RBP10.37□□□□□ -0.75
RFC1-203ENST00000418436 GUSBP11Q6P575 273 aa10.37□□□□□ -0.75
RFC1-203ENST00000418436 SLC30A9Q6PML9 568 aa10.37□□□□□ -0.75
RFC1-203ENST00000418436 DHRS13Q6UX07 377 aa10.37□□□□□ -0.75
RFC1-203ENST00000418436 CHST15Q7LFX5 561 aaPredicted RBP10.37□□□□□ -0.75
RFC1-203ENST00000418436 NLRP9Q7RTR0 991 aa10.37□□□□□ -0.75
RFC1-203ENST00000418436 SNX20Q7Z614 316 aa10.37□□□□□ -0.75
RFC1-203ENST00000418436 C11orf96Q7Z7L8 435 aa10.37□□□□□ -0.75
RFC1-203ENST00000418436 LRRTM4Q86VH4 590 aa10.37□□□□□ -0.75
RFC1-203ENST00000418436 SFTPA2Q8IWL1 248 aa10.37□□□□□ -0.75
RFC1-203ENST00000418436 CACTIN-AS1Q8N1I8 211 aa10.37□□□□□ -0.75
RFC1-203ENST00000418436 RASGEF1AQ8N9B8 481 aa10.37□□□□□ -0.75
RFC1-203ENST00000418436 MCUQ8NE86 351 aa10.37□□□□□ -0.75
RFC1-203ENST00000418436 OR6C4Q8NGE1 309 aa10.37□□□□□ -0.75
RFC1-203ENST00000418436 OR13J1Q8NGT2 312 aa10.37□□□□□ -0.75
RFC1-203ENST00000418436 IFI44Q8TCB0 444 aa10.37□□□□□ -0.75
RFC1-203ENST00000418436 CPT1BQ92523 772 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms