RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 GALNT1Q10472 559 aaPredicted RBP5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 EIF3IQ13347 325 aaKnown RBP5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 DCTN2Q13561 401 aaKnown RBP5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 CAPSQ13938 189 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 CYLC2Q14093 348 aaPredicted RBP5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 E2F2Q14209 437 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 ZNF267Q14586 743 aaPredicted RBP5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 NR1D2Q14995 579 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 MYLK3Q32MK0 819 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 PRR16Q569H4 304 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 SLC45A4Q5BKX6 768 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 ZRANB3Q5FWF4 1079 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 LY6G5CQ5SRR4 150 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 ZNF658Q5TYW1 1059 aaPredicted RBP5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 CTRB2Q6GPI1 263 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 TCTN3Q6NUS6 607 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 ARMCX5Q6P1M9 558 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 ASB18Q6ZVZ8 466 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 CBLL1Q75N03 491 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 MIER3Q7Z3K6 550 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 HEATR3Q7Z4Q2 680 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 ZFAND4Q86XD8 727 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 IRF2BP1Q8IU81 584 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 CACNA2D3Q8IZS8 1091 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 KIRREL3Q8IZU9 778 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 FBXO39Q8N4B4 442 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 MREGQ8N565 214 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 PPM1NQ8N819 430 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 LSMEM1Q8N8F7 131 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 ENDOVQ8N8Q3 282 aaKnown RBP5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 MLKLQ8NB16 471 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 CCDC148Q8NFR7 591 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 SLC35G2Q8TBE7 412 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 FNDC8Q8TC99 324 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 IGDCC4Q8TDY8 1250 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 AGAP11Q8TF27 550 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 APOBEC4Q8WW27 367 aaKnown RBP5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 NRBF2Q96F24 287 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 CEP170P1Q96L14 293 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 IFT74Q96LB3 600 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 TAAR9Q96RI9 348 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 SYT3Q9BQG1 590 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 HAUS8Q9BT25 410 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 SPATA16Q9BXB7 569 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 NFKBIZQ9BYH8 718 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 SCAND2PQ9GZW5 306 aaPredicted RBP5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 PRMT7Q9NVM4 692 aaPredicted RBP5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 GCNT4Q9P109 453 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 BAIAP2L1Q9UHR4 511 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 PRSS50Q9UI38 385 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 ZNF711Q9Y462 761 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 STON1Q9Y6Q2 735 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 OBSL1O75147 1896 aa5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 COL27A1Q8IZC6 1860 aaPredicted RBP5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 TP53BP1Q12888 1972 aaPredicted RBP5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 ATRQ13535 2644 aa5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 A0A0B4J203 849 aa5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 A0A1W2PPC4 97 aa5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 C2orf78A6NCI8 922 aa5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 WASH3PC4AMC7 463 aa5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 M0QZQ0 153 aa5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 AGPSO00116 658 aa5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 CPLX1O14810 134 aa5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 CASQ2O14958 399 aaPredicted RBP5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 FFAR2O15552 330 aa5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 PRICKLE3O43900 615 aaPredicted RBP5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 SUPT3HO75486 399 aa5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 ZNF202O95125 648 aa5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 PCDH8O95206 1070 aa5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 APOEP02649 317 aa5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 CYP3A4P08684 503 aa5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 ALPPL2P10696 532 aa5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 HAPLN1P10915 354 aaPredicted RBP5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 COX6B1P14854 86 aa5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 NAGAP17050 411 aa5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 HDCP19113 662 aa5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 TBXAS1P24557 533 aaPredicted RBP5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 CASP14P31944 242 aa5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 VIPR1P32241 457 aa5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 TRAPPC10P48553 1259 aa5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 SLC5A3P53794 718 aa5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 PER3P56645 1201 aa5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 RNASE9P60153 205 aaKnown RBP5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 DCAF4L1Q3SXM0 396 aa5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 SLC39A12Q504Y0 691 aa5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 ZNF362Q5T0B9 420 aaPredicted RBP5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 MBNL2Q5VZF2 373 aaKnown RBP5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 KIAA0895LQ68EN5 471 aa5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 FIP1L1Q6UN15 594 aaKnown RBP5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 CD300LDQ6UXZ3 194 aa5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 Q6ZNX1 250 aa5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 DSG4Q86SJ6 1040 aa5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 ATG4DQ86TL0 474 aaPredicted RBP5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 CAND1Q86VP6 1230 aaKnown RBP5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 TGIF2LYQ8IUE0 185 aa5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 DTX3Q8N9I9 347 aa5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 EIF1ADQ8N9N8 165 aaKnown RBP5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 FSIP1Q8NA03 581 aa5.51□□□□□ -1.53
ECHDC1-206ENST00000417628 CALML6Q8TD86 181 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms