RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 TSPAN33Q86UF1 283 aa17.81■□□□□ 0.44
VCP-202ENST00000417448 FAM71DQ8N9W8 422 aa17.81■□□□□ 0.44
VCP-202ENST00000417448 OR56A4Q8NGH8 313 aa17.81■□□□□ 0.44
VCP-202ENST00000417448 ATL2Q8NHH9 583 aa17.81■□□□□ 0.44
VCP-202ENST00000417448 HCAR2Q8TDS4 363 aa17.81■□□□□ 0.44
VCP-202ENST00000417448 TMEM121Q9BTD3 319 aa17.81■□□□□ 0.44
VCP-202ENST00000417448 TDRD1Q9BXT4 1180 aaKnown RBP17.81■□□□□ 0.44
VCP-202ENST00000417448 SLC25A51Q9H1U9 297 aa17.81■□□□□ 0.44
VCP-202ENST00000417448 CARD9Q9H257 536 aa17.81■□□□□ 0.44
VCP-202ENST00000417448 PCDH9Q9HC56 1237 aa17.81■□□□□ 0.44
VCP-202ENST00000417448 SLC39A1Q9NY26 324 aa17.81■□□□□ 0.44
VCP-202ENST00000417448 TMEM9Q9P0T7 183 aa17.81■□□□□ 0.44
VCP-202ENST00000417448 AMACRQ9UHK6 382 aa17.81■□□□□ 0.44
VCP-202ENST00000417448 TNRC6AQ8NDV7 1962 aaKnown RBP17.8■□□□□ 0.44
VCP-202ENST00000417448 NPIPB15A6NHN6 443 aaPredicted RBP17.8■□□□□ 0.44
VCP-202ENST00000417448 FGGP02679 453 aa17.8■□□□□ 0.44
VCP-202ENST00000417448 PIRTP0C851 137 aa17.8■□□□□ 0.44
VCP-202ENST00000417448 THRAP10827 490 aa17.8■□□□□ 0.44
VCP-202ENST00000417448 COL8A1P27658 744 aa17.8■□□□□ 0.44
VCP-202ENST00000417448 GDF10P55107 478 aa17.8■□□□□ 0.44
VCP-202ENST00000417448 MTM1Q13496 603 aa17.8■□□□□ 0.44
VCP-202ENST00000417448 OLIG2Q13516 323 aa17.8■□□□□ 0.44
VCP-202ENST00000417448 AGERQ15109 404 aa17.8■□□□□ 0.44
VCP-202ENST00000417448 RALGPS1Q5JS13 557 aa17.8■□□□□ 0.44
VCP-202ENST00000417448 ANKRD20A2Q5SQ80 823 aa17.8■□□□□ 0.44
VCP-202ENST00000417448 ANKRD20A1Q5TYW2 823 aa17.8■□□□□ 0.44
VCP-202ENST00000417448 ANKRD20A3Q5VUR7 823 aa17.8■□□□□ 0.44
VCP-202ENST00000417448 NKAIN2Q5VXU1 208 aa17.8■□□□□ 0.44
VCP-202ENST00000417448 RFLNAQ6ZTI6 216 aa17.8■□□□□ 0.44
VCP-202ENST00000417448 BMPERQ8N8U9 685 aa17.8■□□□□ 0.44
VCP-202ENST00000417448 AGBL5Q8NDL9 886 aa17.8■□□□□ 0.44
VCP-202ENST00000417448 SLC35B2Q8TB61 432 aa17.8■□□□□ 0.44
VCP-202ENST00000417448 COG1Q8WTW3 980 aa17.8■□□□□ 0.44
VCP-202ENST00000417448 OXNAD1Q96HP4 312 aaPredicted RBP17.8■□□□□ 0.44
VCP-202ENST00000417448 WDR24Q96S15 920 aa17.8■□□□□ 0.44
VCP-202ENST00000417448 GORASP1Q9BQQ3 440 aa17.8■□□□□ 0.44
VCP-202ENST00000417448 RSPH14Q9UHP6 348 aa17.8■□□□□ 0.44
VCP-202ENST00000417448 PHTF1Q9UMS5 762 aa17.8■□□□□ 0.44
VCP-202ENST00000417448 SRPK3Q9UPE1 567 aa17.8■□□□□ 0.44
VCP-202ENST00000417448 JRKLQ9Y4A0 524 aa17.8■□□□□ 0.44
VCP-202ENST00000417448 ZNF185O15231 689 aa17.79■□□□□ 0.44
VCP-202ENST00000417448 ETS1P14921 441 aa17.79■□□□□ 0.44
VCP-202ENST00000417448 GM2AP17900 193 aa17.79■□□□□ 0.44
VCP-202ENST00000417448 CES1P23141 567 aa17.79■□□□□ 0.44
VCP-202ENST00000417448 EPHB1P54762 984 aa17.79■□□□□ 0.44
VCP-202ENST00000417448 KIAA1024LP59773 190 aa17.79■□□□□ 0.44
VCP-202ENST00000417448 GNG11P61952 73 aa17.79■□□□□ 0.44
VCP-202ENST00000417448 POLR2LP62875 67 aaKnown RBP17.79■□□□□ 0.44
VCP-202ENST00000417448 ELP6Q0PNE2 266 aa17.79■□□□□ 0.44
VCP-202ENST00000417448 TRA2AQ13595 282 aaKnown RBP eCLIP17.79■□□□□ 0.44
VCP-202ENST00000417448 CLPPQ16740 277 aaPredicted RBP17.79■□□□□ 0.44
VCP-202ENST00000417448 QPCTQ16769 361 aa17.79■□□□□ 0.44
VCP-202ENST00000417448 LONRF2Q1L5Z9 754 aa17.79■□□□□ 0.44
VCP-202ENST00000417448 LIPIQ6XZB0 460 aa17.79■□□□□ 0.44
VCP-202ENST00000417448 DPPA4Q7L190 304 aa17.79■□□□□ 0.44
VCP-202ENST00000417448 TIPARPQ7Z3E1 657 aaKnown RBP17.79■□□□□ 0.44
VCP-202ENST00000417448 TTC13Q8NBP0 860 aa17.79■□□□□ 0.44
VCP-202ENST00000417448 OR4D9Q8NGE8 314 aa17.79■□□□□ 0.44
VCP-202ENST00000417448 PATE1Q8WXA2 126 aa17.79■□□□□ 0.44
VCP-202ENST00000417448 STARD8Q92502 1023 aa17.79■□□□□ 0.44
VCP-202ENST00000417448 LGR4Q9BXB1 951 aa17.79■□□□□ 0.44
VCP-202ENST00000417448 ASPSCR1Q9BZE9 553 aa17.79■□□□□ 0.44
VCP-202ENST00000417448 EFCAB7A8K855 629 aa17.78■□□□□ 0.44
VCP-202ENST00000417448 RHPN2P1A8MT19 583 aa17.78■□□□□ 0.44
VCP-202ENST00000417448 B4E171 279 aa17.78■□□□□ 0.44
VCP-202ENST00000417448 LIASO43766 372 aa17.78■□□□□ 0.44
VCP-202ENST00000417448 KRT38O76015 456 aa17.78■□□□□ 0.44
VCP-202ENST00000417448 FGF1P05230 155 aa17.78■□□□□ 0.44
VCP-202ENST00000417448 POU3F2P20265 443 aaPredicted RBP17.78■□□□□ 0.44
VCP-202ENST00000417448 LHCGRP22888 699 aa17.78■□□□□ 0.44
VCP-202ENST00000417448 PSMB4P28070 264 aa17.78■□□□□ 0.44
VCP-202ENST00000417448 CSTF2P33240 577 aaKnown RBP eCLIP17.78■□□□□ 0.44
VCP-202ENST00000417448 TSPAN7P41732 249 aa17.78■□□□□ 0.44
VCP-202ENST00000417448 ACOX1Q15067 660 aa17.78■□□□□ 0.44
VCP-202ENST00000417448 CNGA3Q16281 694 aa17.78■□□□□ 0.44
VCP-202ENST00000417448 DCAF12Q5T6F0 453 aa17.78■□□□□ 0.44
VCP-202ENST00000417448 KDELC1Q6UW63 502 aa17.78■□□□□ 0.44
VCP-202ENST00000417448 HSD11B1LQ7Z5J1 315 aa17.78■□□□□ 0.44
VCP-202ENST00000417448 FAM129CQ86XR2 697 aa17.78■□□□□ 0.44
VCP-202ENST00000417448 NRROSQ86YC3 692 aa17.78■□□□□ 0.44
VCP-202ENST00000417448 NLGN4XQ8N0W4 816 aa17.78■□□□□ 0.44
VCP-202ENST00000417448 SLC25A41Q8N5S1 370 aa17.78■□□□□ 0.44
VCP-202ENST00000417448 TEX19Q8NA77 164 aa17.78■□□□□ 0.44
VCP-202ENST00000417448 NLGN4YQ8NFZ3 816 aaPredicted RBP17.78■□□□□ 0.44
VCP-202ENST00000417448 TADA1Q96BN2 335 aa17.78■□□□□ 0.44
VCP-202ENST00000417448 RTP4Q96DX8 246 aa17.78■□□□□ 0.44
VCP-202ENST00000417448 CYP4F12Q9HCS2 524 aa17.78■□□□□ 0.44
VCP-202ENST00000417448 HAUS2Q9NVX0 235 aa17.78■□□□□ 0.44
VCP-202ENST00000417448 MRPS18BQ9Y676 258 aaKnown RBP17.78■□□□□ 0.44
VCP-202ENST00000417448 KCNMB2Q9Y691 235 aa17.78■□□□□ 0.44
VCP-202ENST00000417448 OTOGQ6ZRI0 2925 aa17.78■□□□□ 0.44
VCP-202ENST00000417448 A0A0J9YYE9 177 aa17.77■□□□□ 0.44
VCP-202ENST00000417448 VPS4BO75351 444 aa17.77■□□□□ 0.44
VCP-202ENST00000417448 ECEL1O95672 775 aa17.77■□□□□ 0.44
VCP-202ENST00000417448 TRBC1P01850 177 aa17.77■□□□□ 0.44
VCP-202ENST00000417448 ELFN1P0C7U0 828 aa17.77■□□□□ 0.44
VCP-202ENST00000417448 VIPR1P32241 457 aa17.77■□□□□ 0.44
VCP-202ENST00000417448 CHRNA4P43681 627 aa17.77■□□□□ 0.44
VCP-202ENST00000417448 KCNJ1P48048 391 aa17.77■□□□□ 0.44
VCP-202ENST00000417448 WNT3AP56704 352 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms