RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 CRTC3Q6UUV7 619 aa22.79■■□□□ 1.24
SMARCB1-205ENST00000417137 TRAPPC5Q8IUR0 188 aa22.79■■□□□ 1.24
SMARCB1-205ENST00000417137 BBOF1Q8ND07 529 aa22.79■■□□□ 1.24
SMARCB1-205ENST00000417137 OR4L1Q8NH43 312 aa22.79■■□□□ 1.24
SMARCB1-205ENST00000417137 SNF8Q96H20 258 aa22.79■■□□□ 1.24
SMARCB1-205ENST00000417137 ZNF778Q96MU6 729 aa22.79■■□□□ 1.24
SMARCB1-205ENST00000417137 TRIM51Q9BSJ1 452 aa22.79■■□□□ 1.24
SMARCB1-205ENST00000417137 ZDHHC3Q9NYG2 299 aa22.79■■□□□ 1.24
SMARCB1-205ENST00000417137 SIRPGQ9P1W8 387 aa22.79■■□□□ 1.24
SMARCB1-205ENST00000417137 ANAPC5Q9UJX4 755 aa22.79■■□□□ 1.24
SMARCB1-205ENST00000417137 SOX13Q9UN79 622 aa22.79■■□□□ 1.24
SMARCB1-205ENST00000417137 TRBV5-4A0A0C4DH59 114 aa22.78■■□□□ 1.24
SMARCB1-205ENST00000417137 ACP5P13686 325 aa22.78■■□□□ 1.24
SMARCB1-205ENST00000417137 ZNF7P17097 686 aaPredicted RBP22.78■■□□□ 1.24
SMARCB1-205ENST00000417137 ACRV1P26436 265 aa22.78■■□□□ 1.24
SMARCB1-205ENST00000417137 CA5AP35218 305 aa22.78■■□□□ 1.24
SMARCB1-205ENST00000417137 DNAJC3Q13217 504 aa22.78■■□□□ 1.24
SMARCB1-205ENST00000417137 INSCQ1MX18 579 aa22.78■■□□□ 1.24
SMARCB1-205ENST00000417137 TMEM220Q6QAJ8 160 aa22.78■■□□□ 1.24
SMARCB1-205ENST00000417137 CERS6Q6ZMG9 384 aa22.78■■□□□ 1.24
SMARCB1-205ENST00000417137 SERPINA9Q86WD7 417 aa22.78■■□□□ 1.24
SMARCB1-205ENST00000417137 RASGEF1AQ8N9B8 481 aa22.78■■□□□ 1.24
SMARCB1-205ENST00000417137 MNS1Q8NEH6 495 aa22.78■■□□□ 1.24
SMARCB1-205ENST00000417137 OR6C4Q8NGE1 309 aa22.78■■□□□ 1.24
SMARCB1-205ENST00000417137 ZDHHC1Q8WTX9 485 aa22.78■■□□□ 1.24
SMARCB1-205ENST00000417137 CNTNAP3BQ96NU0 1288 aa22.78■■□□□ 1.24
SMARCB1-205ENST00000417137 TIMM29Q9BSF4 260 aa22.78■■□□□ 1.24
SMARCB1-205ENST00000417137 CNTNAP3Q9BZ76 1288 aa22.78■■□□□ 1.24
SMARCB1-205ENST00000417137 SPATS2LQ9NUQ6 558 aaKnown RBP22.78■■□□□ 1.24
SMARCB1-205ENST00000417137 PADI4Q9UM07 663 aa22.78■■□□□ 1.24
SMARCB1-205ENST00000417137 PLEKHM1Q9Y4G2 1056 aa22.78■■□□□ 1.24
SMARCB1-205ENST00000417137 COL5A1P20908 1838 aaPredicted RBP22.78■■□□□ 1.24
SMARCB1-205ENST00000417137 B4DGG1 531 aa22.77■■□□□ 1.24
SMARCB1-205ENST00000417137 GOT2P00505 430 aaKnown RBP22.77■■□□□ 1.24
SMARCB1-205ENST00000417137 PAMP19021 973 aa22.77■■□□□ 1.24
SMARCB1-205ENST00000417137 ACADVLP49748 655 aa22.77■■□□□ 1.24
SMARCB1-205ENST00000417137 CLCNKAP51800 687 aa22.77■■□□□ 1.24
SMARCB1-205ENST00000417137 FASTKD1Q53R41 847 aaKnown RBP22.77■■□□□ 1.24
SMARCB1-205ENST00000417137 DNAJC21Q5F1R6 531 aaKnown RBP22.77■■□□□ 1.24
SMARCB1-205ENST00000417137 SLC35F3Q8IY50 421 aa22.77■■□□□ 1.24
SMARCB1-205ENST00000417137 NAT6Q93015 286 aa22.77■■□□□ 1.24
SMARCB1-205ENST00000417137 TRIM31Q9BZY9 425 aa22.77■■□□□ 1.24
SMARCB1-205ENST00000417137 KLC4Q9NSK0 619 aa22.77■■□□□ 1.24
SMARCB1-205ENST00000417137 TREX1Q9NSU2 369 aa22.77■■□□□ 1.24
SMARCB1-205ENST00000417137 PCYT1BQ9Y5K3 369 aaPredicted RBP22.77■■□□□ 1.24
SMARCB1-205ENST00000417137 SCN8AQ9UQD0 1980 aa22.77■■□□□ 1.24
SMARCB1-205ENST00000417137 PCNX2A6NKB5 2137 aa22.76■■□□□ 1.23
SMARCB1-205ENST00000417137 EPG5Q9HCE0 2579 aa22.76■■□□□ 1.23
SMARCB1-205ENST00000417137 FAM237BA0A1B0GVD1 139 aa22.76■■□□□ 1.23
SMARCB1-205ENST00000417137 CPED1A4D0V7 1026 aa22.76■■□□□ 1.23
SMARCB1-205ENST00000417137 EME2A4GXA9 379 aaPredicted RBP22.76■■□□□ 1.23
SMARCB1-205ENST00000417137 KLHL33A6NCF5 533 aa22.76■■□□□ 1.23
SMARCB1-205ENST00000417137 RFPL3O75679 317 aa22.76■■□□□ 1.23
SMARCB1-205ENST00000417137 ATP1B2P14415 290 aaPredicted RBP22.76■■□□□ 1.23
SMARCB1-205ENST00000417137 SLC2A4P14672 509 aa22.76■■□□□ 1.23
SMARCB1-205ENST00000417137 NMBRP28336 390 aa22.76■■□□□ 1.23
SMARCB1-205ENST00000417137 FOXN2P32314 431 aa22.76■■□□□ 1.23
SMARCB1-205ENST00000417137 MAGEA3P43357 314 aa22.76■■□□□ 1.23
SMARCB1-205ENST00000417137 CDKN1CP49918 316 aaPredicted RBP22.76■■□□□ 1.23
SMARCB1-205ENST00000417137 E2F1Q01094 437 aa22.76■■□□□ 1.23
SMARCB1-205ENST00000417137 CCDC157Q569K6 752 aa22.76■■□□□ 1.23
SMARCB1-205ENST00000417137 AARS2Q5JTZ9 985 aaKnown RBP22.76■■□□□ 1.23
SMARCB1-205ENST00000417137 SLCO6A1Q86UG4 719 aa22.76■■□□□ 1.23
SMARCB1-205ENST00000417137 ZNF547Q8IVP9 402 aa22.76■■□□□ 1.23
SMARCB1-205ENST00000417137 GPR156Q8NFN8 814 aa22.76■■□□□ 1.23
SMARCB1-205ENST00000417137 SGF29Q96ES7 293 aa22.76■■□□□ 1.23
SMARCB1-205ENST00000417137 ERP44Q9BS26 406 aa22.76■■□□□ 1.23
SMARCB1-205ENST00000417137 TOR4AQ9NXH8 423 aa22.76■■□□□ 1.23
SMARCB1-205ENST00000417137 KCNK6Q9Y257 313 aa22.76■■□□□ 1.23
SMARCB1-205ENST00000417137 UTP11Q9Y3A2 253 aaKnown RBP22.76■■□□□ 1.23
SMARCB1-205ENST00000417137 ST14Q9Y5Y6 855 aa22.76■■□□□ 1.23
SMARCB1-205ENST00000417137 MAD1L1Q9Y6D9 718 aa22.76■■□□□ 1.23
SMARCB1-205ENST00000417137 LY6G6EA0A0G2JKS1 128 aa22.75■■□□□ 1.23
SMARCB1-205ENST00000417137 OR51F1A6NGY5 319 aa22.75■■□□□ 1.23
SMARCB1-205ENST00000417137 OR2AG2A6NM03 316 aa22.75■■□□□ 1.23
SMARCB1-205ENST00000417137 RAD51CO43502 376 aa22.75■■□□□ 1.23
SMARCB1-205ENST00000417137 POP7O75817 140 aaKnown RBP22.75■■□□□ 1.23
SMARCB1-205ENST00000417137 SEC31AO94979 1220 aaKnown RBP22.75■■□□□ 1.23
SMARCB1-205ENST00000417137 GP1BAP07359 652 aa22.75■■□□□ 1.23
SMARCB1-205ENST00000417137 ITGA8P53708 1063 aa22.75■■□□□ 1.23
SMARCB1-205ENST00000417137 ITIH4Q14624 930 aa22.75■■□□□ 1.23
SMARCB1-205ENST00000417137 C14orf28Q4W4Y0 310 aa22.75■■□□□ 1.23
SMARCB1-205ENST00000417137 FNBP1LQ5T0N5 605 aa22.75■■□□□ 1.23
SMARCB1-205ENST00000417137 HIBCHQ6NVY1 386 aaPredicted RBP22.75■■□□□ 1.23
SMARCB1-205ENST00000417137 DET1Q7L5Y6 550 aa22.75■■□□□ 1.23
SMARCB1-205ENST00000417137 AMZ2Q86W34 360 aa22.75■■□□□ 1.23
SMARCB1-205ENST00000417137 PIANPQ8IYJ0 282 aa22.75■■□□□ 1.23
SMARCB1-205ENST00000417137 PDIK1LQ8N165 341 aa22.75■■□□□ 1.23
SMARCB1-205ENST00000417137 MPP5Q8N3R9 675 aa22.75■■□□□ 1.23
SMARCB1-205ENST00000417137 KYQ8NBH2 561 aa22.75■■□□□ 1.23
SMARCB1-205ENST00000417137 MFSD3Q96ES6 412 aa22.75■■□□□ 1.23
SMARCB1-205ENST00000417137 RAB17Q9H0T7 212 aa22.75■■□□□ 1.23
SMARCB1-205ENST00000417137 CATSPERZQ9NTU4 200 aa22.75■■□□□ 1.23
SMARCB1-205ENST00000417137 SNX24Q9Y343 169 aa22.75■■□□□ 1.23
SMARCB1-205ENST00000417137 MRFAP1Q9Y605 127 aa22.75■■□□□ 1.23
SMARCB1-205ENST00000417137 U3KQA8 63 aa22.75■■□□□ 1.23
SMARCB1-205ENST00000417137 LRP4O75096 1905 aa22.74■■□□□ 1.23
SMARCB1-205ENST00000417137 IGLV3-16A0A075B6K0 115 aa22.74■■□□□ 1.23
SMARCB1-205ENST00000417137 F8W8V4 182 aa22.74■■□□□ 1.23
SMARCB1-205ENST00000417137 NOBOXO60393 691 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms