RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 ATP1A1-AS1Q5TC04 95 aa14.59□□□□□ -0.07
RPS28-201ENST00000417088 ABRAXAS1Q6UWZ7 409 aa14.59□□□□□ -0.07
RPS28-201ENST00000417088 B4GALNT4Q76KP1 1039 aa14.59□□□□□ -0.07
RPS28-201ENST00000417088 LRRTM4Q86VH4 590 aa14.59□□□□□ -0.07
RPS28-201ENST00000417088 VSIG1Q86XK7 387 aa14.59□□□□□ -0.07
RPS28-201ENST00000417088 TRIM48Q8IWZ4 208 aa14.59□□□□□ -0.07
RPS28-201ENST00000417088 ESX1Q8N693 406 aa14.59□□□□□ -0.07
RPS28-201ENST00000417088 SPATA22Q8NHS9 363 aa14.59□□□□□ -0.07
RPS28-201ENST00000417088 C9orf43Q8TAL5 461 aaPredicted RBP14.59□□□□□ -0.07
RPS28-201ENST00000417088 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.59□□□□□ -0.07
RPS28-201ENST00000417088 APOBEC4Q8WW27 367 aaKnown RBP14.59□□□□□ -0.07
RPS28-201ENST00000417088 STARD8Q92502 1023 aa14.59□□□□□ -0.07
RPS28-201ENST00000417088 RNF31Q96EP0 1072 aa14.59□□□□□ -0.07
RPS28-201ENST00000417088 OLFM3Q96PB7 478 aa14.59□□□□□ -0.07
RPS28-201ENST00000417088 TGM7Q96PF1 710 aa14.59□□□□□ -0.07
RPS28-201ENST00000417088 TIMM29Q9BSF4 260 aa14.59□□□□□ -0.07
RPS28-201ENST00000417088 EPN3Q9H201 632 aa14.59□□□□□ -0.07
RPS28-201ENST00000417088 ZNF71Q9NQZ8 489 aaPredicted RBP14.59□□□□□ -0.07
RPS28-201ENST00000417088 TMPRSS11EQ9UL52 423 aa14.59□□□□□ -0.07
RPS28-201ENST00000417088 DNAJC16Q9Y2G8 782 aa14.59□□□□□ -0.07
RPS28-201ENST00000417088 RPS6KL1Q9Y6S9 549 aa14.59□□□□□ -0.07
RPS28-201ENST00000417088 PDZK1P1A8MUH7 402 aa14.58□□□□□ -0.08
RPS28-201ENST00000417088 GOLGA6L19H0YKK7 550 aa14.58□□□□□ -0.08
RPS28-201ENST00000417088 AURKAO14965 403 aa14.58□□□□□ -0.08
RPS28-201ENST00000417088 TOX3O15405 576 aaPredicted RBP14.58□□□□□ -0.08
RPS28-201ENST00000417088 CDK14O94921 469 aa14.58□□□□□ -0.08
RPS28-201ENST00000417088 NDST3O95803 873 aa14.58□□□□□ -0.08
RPS28-201ENST00000417088 MT-CYBP00156 380 aaPredicted RBP14.58□□□□□ -0.08
RPS28-201ENST00000417088 AMD1P17707 334 aa14.58□□□□□ -0.08
RPS28-201ENST00000417088 TCN2P20062 427 aa14.58□□□□□ -0.08
RPS28-201ENST00000417088 F8A1P23610 371 aa14.58□□□□□ -0.08
RPS28-201ENST00000417088 SEPHS1P49903 392 aa14.58□□□□□ -0.08
RPS28-201ENST00000417088 SH3BP2P78314 561 aa14.58□□□□□ -0.08
RPS28-201ENST00000417088 MC1RQ01726 317 aa14.58□□□□□ -0.08
RPS28-201ENST00000417088 SLC14A2Q15849 920 aa14.58□□□□□ -0.08
RPS28-201ENST00000417088 SEPT7Q16181 437 aaKnown RBP14.58□□□□□ -0.08
RPS28-201ENST00000417088 CRTC2Q53ET0 693 aaPredicted RBP14.58□□□□□ -0.08
RPS28-201ENST00000417088 COLEC12Q5KU26 742 aa14.58□□□□□ -0.08
RPS28-201ENST00000417088 C16orf46Q6P387 395 aa14.58□□□□□ -0.08
RPS28-201ENST00000417088 SLC35G2Q8TBE7 412 aa14.58□□□□□ -0.08
RPS28-201ENST00000417088 ABHD17AQ96GS6 310 aa14.58□□□□□ -0.08
RPS28-201ENST00000417088 MAK16Q9BXY0 300 aaKnown RBP14.58□□□□□ -0.08
RPS28-201ENST00000417088 ULBP3Q9BZM4 244 aa14.58□□□□□ -0.08
RPS28-201ENST00000417088 ZNF768Q9H5H4 540 aaKnown RBP14.58□□□□□ -0.08
RPS28-201ENST00000417088 GLOD4Q9HC38 313 aa14.58□□□□□ -0.08
RPS28-201ENST00000417088 POT1Q9NUX5 634 aa14.58□□□□□ -0.08
RPS28-201ENST00000417088 ANAPC2Q9UJX6 822 aa14.58□□□□□ -0.08
RPS28-201ENST00000417088 SPO11Q9Y5K1 396 aa14.58□□□□□ -0.08
RPS28-201ENST00000417088 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.58□□□□□ -0.08
RPS28-201ENST00000417088 MRPS18BQ9Y676 258 aaKnown RBP14.58□□□□□ -0.08
RPS28-201ENST00000417088 DOPEY2Q9Y3R5 2298 aa14.58□□□□□ -0.08
RPS28-201ENST00000417088 OR52A4PA6NMU1 304 aa14.57□□□□□ -0.08
RPS28-201ENST00000417088 PPP1R12AO14974 1030 aaPredicted RBP14.57□□□□□ -0.08
RPS28-201ENST00000417088 KIF1CO43896 1103 aaKnown RBP14.57□□□□□ -0.08
RPS28-201ENST00000417088 ZFXP17010 805 aaPredicted RBP14.57□□□□□ -0.08
RPS28-201ENST00000417088 RPL10P27635 214 aaKnown RBP14.57□□□□□ -0.08
RPS28-201ENST00000417088 CASRP41180 1078 aa14.57□□□□□ -0.08
RPS28-201ENST00000417088 NOP2P46087 812 aaKnown RBP14.57□□□□□ -0.08
RPS28-201ENST00000417088 TEX44Q53QW1 395 aa14.57□□□□□ -0.08
RPS28-201ENST00000417088 AGAP9Q5VTM2 703 aa14.57□□□□□ -0.08
RPS28-201ENST00000417088 C6orf15Q6UXA7 325 aaPredicted RBP14.57□□□□□ -0.08
RPS28-201ENST00000417088 WASH2PQ6VEQ5 465 aa14.57□□□□□ -0.08
RPS28-201ENST00000417088 C11orf96Q7Z7L8 435 aa14.57□□□□□ -0.08
RPS28-201ENST00000417088 RFX6Q8HWS3 928 aa14.57□□□□□ -0.08
RPS28-201ENST00000417088 RSC1A1Q92681 617 aa14.57□□□□□ -0.08
RPS28-201ENST00000417088 RNF25Q96BH1 459 aaPredicted RBP14.57□□□□□ -0.08
RPS28-201ENST00000417088 VPS35Q96QK1 796 aa14.57□□□□□ -0.08
RPS28-201ENST00000417088 OR6C1Q96RD1 312 aa14.57□□□□□ -0.08
RPS28-201ENST00000417088 DNAJC7Q99615 494 aa14.57□□□□□ -0.08
RPS28-201ENST00000417088 XPO4Q9C0E2 1151 aaKnown RBP14.57□□□□□ -0.08
RPS28-201ENST00000417088 BPIFA1Q9NP55 256 aa14.57□□□□□ -0.08
RPS28-201ENST00000417088 SLC40A1Q9NP59 571 aa14.57□□□□□ -0.08
RPS28-201ENST00000417088 WASH6PQ9NQA3 447 aa14.57□□□□□ -0.08
RPS28-201ENST00000417088 LRRK2Q5S007 2527 aa14.57□□□□□ -0.08
RPS28-201ENST00000417088 SSU72P8A0A1W2PR75 194 aa14.56□□□□□ -0.08
RPS28-201ENST00000417088 PMPCBO75439 489 aa14.56□□□□□ -0.08
RPS28-201ENST00000417088 RASSF9O75901 435 aa14.56□□□□□ -0.08
RPS28-201ENST00000417088 KRT1P04264 644 aa14.56□□□□□ -0.08
RPS28-201ENST00000417088 IDSP22304 550 aa14.56□□□□□ -0.08
RPS28-201ENST00000417088 ARHGAP25P42331 645 aa14.56□□□□□ -0.08
RPS28-201ENST00000417088 DRG2P55039 364 aaKnown RBP14.56□□□□□ -0.08
RPS28-201ENST00000417088 DYNLT1P63172 113 aa14.56□□□□□ -0.08
RPS28-201ENST00000417088 FOXK1P85037 733 aa14.56□□□□□ -0.08
RPS28-201ENST00000417088 GPR18Q14330 331 aa14.56□□□□□ -0.08
RPS28-201ENST00000417088 IL11RAQ14626 422 aa14.56□□□□□ -0.08
RPS28-201ENST00000417088 IGFBP7Q16270 282 aa14.56□□□□□ -0.08
RPS28-201ENST00000417088 ATP13A5Q4VNC0 1218 aa14.56□□□□□ -0.08
RPS28-201ENST00000417088 LRRC38Q5VT99 294 aa14.56□□□□□ -0.08
RPS28-201ENST00000417088 CCDC70Q6NSX1 233 aa14.56□□□□□ -0.08
RPS28-201ENST00000417088 PRSS42Q7Z5A4 293 aa14.56□□□□□ -0.08
RPS28-201ENST00000417088 RBM12BQ8IXT5 1001 aaKnown RBP14.56□□□□□ -0.08
RPS28-201ENST00000417088 GALNT6Q8NCL4 622 aa14.56□□□□□ -0.08
RPS28-201ENST00000417088 OR8K1Q8NGG5 319 aa14.56□□□□□ -0.08
RPS28-201ENST00000417088 KLHL6Q8WZ60 621 aa14.56□□□□□ -0.08
RPS28-201ENST00000417088 SRPK1Q96SB4 655 aaKnown RBP14.56□□□□□ -0.08
RPS28-201ENST00000417088 DEF6Q9H4E7 631 aa14.56□□□□□ -0.08
RPS28-201ENST00000417088 UBP1Q9NZI7 540 aa14.56□□□□□ -0.08
RPS28-201ENST00000417088 TRIM10Q9UDY6 481 aa14.56□□□□□ -0.08
RPS28-201ENST00000417088 CROTQ9UKG9 612 aa14.56□□□□□ -0.08
RPS28-201ENST00000417088 WDR37Q9Y2I8 494 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms