RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 WBP11Q9Y2W2 641 aaKnown RBP12.8□□□□□ -0.36
SCN1B-202ENST00000415950 RGPD2P0DJD1 1756 aa12.8□□□□□ -0.36
SCN1B-202ENST00000415950 FAM240BA0A1B0GVZ2 78 aa12.8□□□□□ -0.36
SCN1B-202ENST00000415950 TPD52L2O43399 206 aaKnown RBP12.8□□□□□ -0.36
SCN1B-202ENST00000415950 OR4F21O95013 312 aa12.8□□□□□ -0.36
SCN1B-202ENST00000415950 HLA-DQA2P01906 255 aa12.8□□□□□ -0.36
SCN1B-202ENST00000415950 THRBP10828 461 aa12.8□□□□□ -0.36
SCN1B-202ENST00000415950 COL6A1P12109 1028 aa12.8□□□□□ -0.36
SCN1B-202ENST00000415950 PRKCHP24723 683 aa12.8□□□□□ -0.36
SCN1B-202ENST00000415950 GCAP28676 217 aa12.8□□□□□ -0.36
SCN1B-202ENST00000415950 CDK18Q07002 472 aa12.8□□□□□ -0.36
SCN1B-202ENST00000415950 SLC10A2Q12908 348 aaPredicted RBP12.8□□□□□ -0.36
SCN1B-202ENST00000415950 MFSD10Q14728 455 aa12.8□□□□□ -0.36
SCN1B-202ENST00000415950 PTPRCAPQ14761 206 aa12.8□□□□□ -0.36
SCN1B-202ENST00000415950 XKR6Q5GH73 641 aa12.8□□□□□ -0.36
SCN1B-202ENST00000415950 SH3D19Q5HYK7 790 aa12.8□□□□□ -0.36
SCN1B-202ENST00000415950 CXCL17Q6UXB2 119 aa12.8□□□□□ -0.36
SCN1B-202ENST00000415950 AHI1Q8N157 1196 aa12.8□□□□□ -0.36
SCN1B-202ENST00000415950 STK40Q8N2I9 435 aa12.8□□□□□ -0.36
SCN1B-202ENST00000415950 NIPA2Q8N8Q9 360 aa12.8□□□□□ -0.36
SCN1B-202ENST00000415950 RDH11Q8TC12 318 aa12.8□□□□□ -0.36
SCN1B-202ENST00000415950 GTF3C2Q8WUA4 911 aaPredicted RBP12.8□□□□□ -0.36
SCN1B-202ENST00000415950 GPR21Q99679 349 aa12.8□□□□□ -0.36
SCN1B-202ENST00000415950 PMM2O15305 246 aa12.8□□□□□ -0.36
SCN1B-202ENST00000415950 SETMARQ53H47 684 aaPredicted RBP12.8□□□□□ -0.36
SCN1B-202ENST00000415950 THAP5Q7Z6K1 395 aa12.8□□□□□ -0.36
SCN1B-202ENST00000415950 RASAL3Q86YV0 1011 aa12.8□□□□□ -0.36
SCN1B-202ENST00000415950 LRRC17Q8N6Y2 441 aa12.8□□□□□ -0.36
SCN1B-202ENST00000415950 KCNA7Q96RP8 456 aa12.8□□□□□ -0.36
SCN1B-202ENST00000415950 CHCHD6Q9BRQ6 235 aa12.8□□□□□ -0.36
SCN1B-202ENST00000415950 C20orf27Q9GZN8 174 aa12.8□□□□□ -0.36
SCN1B-202ENST00000415950 TOR3AQ9H497 397 aa12.8□□□□□ -0.36
SCN1B-202ENST00000415950 AGO3Q9H9G7 860 aaKnown RBP12.8□□□□□ -0.36
SCN1B-202ENST00000415950 DNAJB4Q9UDY4 337 aa12.8□□□□□ -0.36
SCN1B-202ENST00000415950 CNTN6Q9UQ52 1028 aa12.8□□□□□ -0.36
SCN1B-202ENST00000415950 ENTPD4Q9Y227 616 aa12.8□□□□□ -0.36
SCN1B-202ENST00000415950 PABPC4LP0CB38 370 aaKnown RBP12.8□□□□□ -0.36
SCN1B-202ENST00000415950 EPHX2P34913 555 aa12.8□□□□□ -0.36
SCN1B-202ENST00000415950 ATP5C1P36542 298 aaKnown RBP12.8□□□□□ -0.36
SCN1B-202ENST00000415950 DGKEP52429 567 aa12.8□□□□□ -0.36
SCN1B-202ENST00000415950 DGKQP52824 942 aa12.8□□□□□ -0.36
SCN1B-202ENST00000415950 TGM3Q08188 693 aa12.8□□□□□ -0.36
SCN1B-202ENST00000415950 DNASE1L3Q13609 305 aa12.8□□□□□ -0.36
SCN1B-202ENST00000415950 FAM151BQ6UXP7 276 aa12.8□□□□□ -0.36
SCN1B-202ENST00000415950 SCAMP5Q8TAC9 235 aa12.8□□□□□ -0.36
SCN1B-202ENST00000415950 KCNK13Q9HB14 408 aa12.8□□□□□ -0.36
SCN1B-202ENST00000415950 OR6A2O95222 327 aa12.79□□□□□ -0.36
SCN1B-202ENST00000415950 ANGPTL1O95841 491 aa12.79□□□□□ -0.36
SCN1B-202ENST00000415950 NR2F6P10588 404 aa12.79□□□□□ -0.36
SCN1B-202ENST00000415950 SERPINA4P29622 427 aa12.79□□□□□ -0.36
SCN1B-202ENST00000415950 MS4A2Q01362 244 aa12.79□□□□□ -0.36
SCN1B-202ENST00000415950 MXD1Q05195 221 aa12.79□□□□□ -0.36
SCN1B-202ENST00000415950 IKBKEQ14164 716 aa12.79□□□□□ -0.36
SCN1B-202ENST00000415950 FKBP1CQ5VVH2 108 aa12.79□□□□□ -0.36
SCN1B-202ENST00000415950 EPGNQ6UW88 154 aa12.79□□□□□ -0.36
SCN1B-202ENST00000415950 FAM131AQ6UXB0 335 aa12.79□□□□□ -0.36
SCN1B-202ENST00000415950 PTCHD4Q6ZW05 846 aa12.79□□□□□ -0.36
SCN1B-202ENST00000415950 DENND1CQ8IV53 801 aa12.79□□□□□ -0.36
SCN1B-202ENST00000415950 S100ZQ8WXG8 99 aa12.79□□□□□ -0.36
SCN1B-202ENST00000415950 GATA6Q92908 595 aa12.79□□□□□ -0.36
SCN1B-202ENST00000415950 DMRTB1Q96MA1 342 aa12.79□□□□□ -0.36
SCN1B-202ENST00000415950 NFKBIZQ9BYH8 718 aa12.79□□□□□ -0.36
SCN1B-202ENST00000415950 ABHD16BQ9H3Z7 469 aa12.79□□□□□ -0.36
SCN1B-202ENST00000415950 TMLHEQ9NVH6 421 aa12.79□□□□□ -0.36
SCN1B-202ENST00000415950 PTGDR2Q9Y5Y4 395 aa12.79□□□□□ -0.36
SCN1B-202ENST00000415950 TLR5O60602 858 aa12.79□□□□□ -0.36
SCN1B-202ENST00000415950 PGLSO95336 258 aa12.79□□□□□ -0.36
SCN1B-202ENST00000415950 OTCP00480 354 aa12.79□□□□□ -0.36
SCN1B-202ENST00000415950 CKBP12277 381 aa12.79□□□□□ -0.36
SCN1B-202ENST00000415950 POU2F1P14859 743 aa12.79□□□□□ -0.36
SCN1B-202ENST00000415950 IL7RP16871 459 aa12.79□□□□□ -0.36
SCN1B-202ENST00000415950 IFNGR2P38484 337 aa12.79□□□□□ -0.36
SCN1B-202ENST00000415950 BUD31P41223 144 aaPredicted RBP12.79□□□□□ -0.36
SCN1B-202ENST00000415950 TTPAP49638 278 aa12.79□□□□□ -0.36
SCN1B-202ENST00000415950 BIKQ13323 160 aa12.79□□□□□ -0.36
SCN1B-202ENST00000415950 CYP2A13Q16696 494 aa12.79□□□□□ -0.36
SCN1B-202ENST00000415950 OR4L1Q8NH43 312 aa12.79□□□□□ -0.36
SCN1B-202ENST00000415950 HOPXQ9BPY8 73 aaPredicted RBP12.79□□□□□ -0.36
SCN1B-202ENST00000415950 SLITRK2Q9H156 845 aa12.79□□□□□ -0.36
SCN1B-202ENST00000415950 PLK2Q9NYY3 685 aa12.79□□□□□ -0.36
SCN1B-202ENST00000415950 IFT80Q9P2H3 777 aaPredicted RBP12.79□□□□□ -0.36
SCN1B-202ENST00000415950 NDOR1Q9UHB4 597 aa12.79□□□□□ -0.36
SCN1B-202ENST00000415950 SYNPO2Q9UMS6 1093 aa12.79□□□□□ -0.36
SCN1B-202ENST00000415950 SOWAHBA6NEL2 793 aa12.79□□□□□ -0.36
SCN1B-202ENST00000415950 POLR2JP52435 117 aaKnown RBP12.79□□□□□ -0.36
SCN1B-202ENST00000415950 MBTD1Q05BQ5 628 aa12.79□□□□□ -0.36
SCN1B-202ENST00000415950 LSAMPQ13449 338 aa12.79□□□□□ -0.36
SCN1B-202ENST00000415950 ZNF544Q6NX49 715 aa12.79□□□□□ -0.36
SCN1B-202ENST00000415950 C16orf62Q7Z3J2 963 aa12.79□□□□□ -0.36
SCN1B-202ENST00000415950 RELL1Q8IUW5 271 aa12.79□□□□□ -0.36
SCN1B-202ENST00000415950 ERI1Q8IV48 349 aaKnown RBP12.79□□□□□ -0.36
SCN1B-202ENST00000415950 TRPM4Q8TD43 1214 aa12.79□□□□□ -0.36
SCN1B-202ENST00000415950 PIH1D2Q8WWB5 315 aa12.79□□□□□ -0.36
SCN1B-202ENST00000415950 TP53INP1Q96A56 240 aa12.79□□□□□ -0.36
SCN1B-202ENST00000415950 SLC47A1Q96FL8 570 aa12.79□□□□□ -0.36
SCN1B-202ENST00000415950 RNF39Q9H2S5 420 aa12.79□□□□□ -0.36
SCN1B-202ENST00000415950 AKTIPQ9H8T0 292 aa12.79□□□□□ -0.36
SCN1B-202ENST00000415950 SPON1Q9HCB6 807 aa12.79□□□□□ -0.36
SCN1B-202ENST00000415950 STARD7Q9NQZ5 370 aa12.79□□□□□ -0.36
SCN1B-202ENST00000415950 SSR3Q9UNL2 185 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms