RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 AP4B1Q9Y6B7 739 aa11.49□□□□□ -0.57
RFFL-205ENST00000415395 A0A0J9YYE9 177 aa11.48□□□□□ -0.57
RFFL-205ENST00000415395 A0A1W2PPC1 479 aa11.48□□□□□ -0.57
RFFL-205ENST00000415395 NEMP1O14524 444 aa11.48□□□□□ -0.57
RFFL-205ENST00000415395 DNAJA2O60884 412 aa11.48□□□□□ -0.57
RFFL-205ENST00000415395 TULP3O75386 442 aa11.48□□□□□ -0.57
RFFL-205ENST00000415395 TRBC1P01850 177 aa11.48□□□□□ -0.57
RFFL-205ENST00000415395 ENO3P13929 434 aaPredicted RBP11.48□□□□□ -0.57
RFFL-205ENST00000415395 ARSAP15289 507 aa11.48□□□□□ -0.57
RFFL-205ENST00000415395 HMGCLP35914 325 aa11.48□□□□□ -0.57
RFFL-205ENST00000415395 EIF2DP41214 584 aaKnown RBP11.48□□□□□ -0.57
RFFL-205ENST00000415395 ARSDP51689 593 aa11.48□□□□□ -0.57
RFFL-205ENST00000415395 THOP1P52888 689 aa11.48□□□□□ -0.57
RFFL-205ENST00000415395 SLC12A2P55011 1212 aa11.48□□□□□ -0.57
RFFL-205ENST00000415395 DNAJB13P59910 316 aa11.48□□□□□ -0.57
RFFL-205ENST00000415395 MRPS22P82650 360 aaKnown RBP11.48□□□□□ -0.57
RFFL-205ENST00000415395 POU4F1Q01851 419 aa11.48□□□□□ -0.57
RFFL-205ENST00000415395 CTBP1Q13363 440 aa11.48□□□□□ -0.57
RFFL-205ENST00000415395 PTK2BQ14289 1009 aa11.48□□□□□ -0.57
RFFL-205ENST00000415395 COL19A1Q14993 1142 aa11.48□□□□□ -0.57
RFFL-205ENST00000415395 GEN1Q17RS7 908 aa11.48□□□□□ -0.57
RFFL-205ENST00000415395 ARL13AQ5H913 290 aaPredicted RBP11.48□□□□□ -0.57
RFFL-205ENST00000415395 TMEM215Q68D42 235 aa11.48□□□□□ -0.57
RFFL-205ENST00000415395 GRAMD4Q6IC98 578 aa11.48□□□□□ -0.57
RFFL-205ENST00000415395 TANGO2Q6ICL3 276 aa11.48□□□□□ -0.57
RFFL-205ENST00000415395 LRRC8EQ6NSJ5 796 aa11.48□□□□□ -0.57
RFFL-205ENST00000415395 VITQ6UXI7 678 aa11.48□□□□□ -0.57
RFFL-205ENST00000415395 SATL1Q86VE3 508 aa11.48□□□□□ -0.57
RFFL-205ENST00000415395 CAMK1DQ8IU85 385 aa11.48□□□□□ -0.57
RFFL-205ENST00000415395 DENND6AQ8IWF6 608 aa11.48□□□□□ -0.57
RFFL-205ENST00000415395 TTC30BQ8N4P2 665 aa11.48□□□□□ -0.57
RFFL-205ENST00000415395 NAT16Q8N8M0 369 aa11.48□□□□□ -0.57
RFFL-205ENST00000415395 BHLHE22Q8NFJ8 381 aaPredicted RBP11.48□□□□□ -0.57
RFFL-205ENST00000415395 OR4L1Q8NH43 312 aa11.48□□□□□ -0.57
RFFL-205ENST00000415395 ASB9Q96DX5 294 aa11.48□□□□□ -0.57
RFFL-205ENST00000415395 LRIG1Q96JA1 1093 aa11.48□□□□□ -0.57
RFFL-205ENST00000415395 MRGPRX3Q96LB0 322 aa11.48□□□□□ -0.57
RFFL-205ENST00000415395 TBATAQ96M53 351 aa11.48□□□□□ -0.57
RFFL-205ENST00000415395 NECTIN4Q96NY8 510 aa11.48□□□□□ -0.57
RFFL-205ENST00000415395 TCF12Q99081 682 aa11.48□□□□□ -0.57
RFFL-205ENST00000415395 TNKS2Q9H2K2 1166 aa11.48□□□□□ -0.57
RFFL-205ENST00000415395 SUV39H2Q9H5I1 410 aa11.48□□□□□ -0.57
RFFL-205ENST00000415395 ZNF385DQ9H6B1 395 aa11.48□□□□□ -0.57
RFFL-205ENST00000415395 TIMMDC1Q9NPL8 285 aa11.48□□□□□ -0.57
RFFL-205ENST00000415395 INTS10Q9NVR2 710 aaKnown RBP11.48□□□□□ -0.57
RFFL-205ENST00000415395 ZNF358Q9NW07 568 aa11.48□□□□□ -0.57
RFFL-205ENST00000415395 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.48□□□□□ -0.57
RFFL-205ENST00000415395 DEC1Q9P2X7 70 aa11.48□□□□□ -0.57
RFFL-205ENST00000415395 CIDEBQ9UHD4 219 aa11.48□□□□□ -0.57
RFFL-205ENST00000415395 RIMS3Q9UJD0 308 aa11.48□□□□□ -0.57
RFFL-205ENST00000415395 RUVBL2Q9Y230 463 aaKnown RBP11.48□□□□□ -0.57
RFFL-205ENST00000415395 VPS9D1Q9Y2B5 631 aa11.48□□□□□ -0.57
RFFL-205ENST00000415395 ZNF711Q9Y462 761 aa11.48□□□□□ -0.57
RFFL-205ENST00000415395 MUC22E2RYF6 1773 aaPredicted RBP11.48□□□□□ -0.57
RFFL-205ENST00000415395 PRSS51A0A1B0GVH4 220 aa11.47□□□□□ -0.57
RFFL-205ENST00000415395 DYTNA2CJ06 578 aa11.47□□□□□ -0.57
RFFL-205ENST00000415395 CCDC160A6NGH7 325 aa11.47□□□□□ -0.57
RFFL-205ENST00000415395 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.47□□□□□ -0.57
RFFL-205ENST00000415395 PFDN6O15212 129 aa11.47□□□□□ -0.57
RFFL-205ENST00000415395 STX7O15400 261 aaKnown RBP11.47□□□□□ -0.57
RFFL-205ENST00000415395 CD3EAPO15446 510 aaKnown RBP11.47□□□□□ -0.57
RFFL-205ENST00000415395 CFLARO15519 480 aa11.47□□□□□ -0.57
RFFL-205ENST00000415395 GOT2P00505 430 aaKnown RBP11.47□□□□□ -0.57
RFFL-205ENST00000415395 PIRTP0C851 137 aa11.47□□□□□ -0.57
RFFL-205ENST00000415395 STMN1P16949 149 aa11.47□□□□□ -0.57
RFFL-205ENST00000415395 PSMC3P17980 439 aa11.47□□□□□ -0.57
RFFL-205ENST00000415395 NFKBIAP25963 317 aa11.47□□□□□ -0.57
RFFL-205ENST00000415395 GABRB3P28472 473 aa11.47□□□□□ -0.57
RFFL-205ENST00000415395 RAB10P61026 200 aa11.47□□□□□ -0.57
RFFL-205ENST00000415395 MPP1Q00013 466 aa11.47□□□□□ -0.57
RFFL-205ENST00000415395 IRF9Q00978 393 aa11.47□□□□□ -0.57
RFFL-205ENST00000415395 TRAP1Q12931 704 aaKnown RBP11.47□□□□□ -0.57
RFFL-205ENST00000415395 SQLEQ14534 574 aa11.47□□□□□ -0.57
RFFL-205ENST00000415395 TLR1Q15399 786 aa11.47□□□□□ -0.57
RFFL-205ENST00000415395 SMAD1Q15797 465 aaKnown RBP11.47□□□□□ -0.57
RFFL-205ENST00000415395 TYSND1Q2T9J0 566 aa11.47□□□□□ -0.57
RFFL-205ENST00000415395 GAB4Q2WGN9 574 aa11.47□□□□□ -0.57
RFFL-205ENST00000415395 LRIT3Q3SXY7 679 aa11.47□□□□□ -0.57
RFFL-205ENST00000415395 IRAK1BP1Q5VVH5 260 aa11.47□□□□□ -0.57
RFFL-205ENST00000415395 KLC3Q6P597 504 aa11.47□□□□□ -0.57
RFFL-205ENST00000415395 FBXL19Q6PCT2 694 aa11.47□□□□□ -0.57
RFFL-205ENST00000415395 MTSS1LQ765P7 747 aa11.47□□□□□ -0.57
RFFL-205ENST00000415395 PTAR1Q7Z6K3 402 aaPredicted RBP11.47□□□□□ -0.57
RFFL-205ENST00000415395 YAF2Q8IY57 180 aa11.47□□□□□ -0.57
RFFL-205ENST00000415395 RYBPQ8N488 228 aaPredicted RBP11.47□□□□□ -0.57
RFFL-205ENST00000415395 OR4K2Q8NGD2 314 aa11.47□□□□□ -0.57
RFFL-205ENST00000415395 OR13C4Q8NGS5 318 aa11.47□□□□□ -0.57
RFFL-205ENST00000415395 MAPK15Q8TD08 544 aa11.47□□□□□ -0.57
RFFL-205ENST00000415395 HCAR2Q8TDS4 363 aa11.47□□□□□ -0.57
RFFL-205ENST00000415395 FRS2Q8WU20 508 aa11.47□□□□□ -0.57
RFFL-205ENST00000415395 MYADMQ96S97 322 aa11.47□□□□□ -0.57
RFFL-205ENST00000415395 MRPL57Q9BQC6 102 aaKnown RBP11.47□□□□□ -0.57
RFFL-205ENST00000415395 MRPL46Q9H2W6 279 aaKnown RBP11.47□□□□□ -0.57
RFFL-205ENST00000415395 CAB39LQ9H9S4 337 aa11.47□□□□□ -0.57
RFFL-205ENST00000415395 HPS4Q9NQG7 708 aa11.47□□□□□ -0.57
RFFL-205ENST00000415395 CATSPERZQ9NTU4 200 aa11.47□□□□□ -0.57
RFFL-205ENST00000415395 SLCO3A1Q9UIG8 710 aa11.47□□□□□ -0.57
RFFL-205ENST00000415395 PKP3Q9Y446 797 aa11.47□□□□□ -0.57
RFFL-205ENST00000415395 KCTD3Q9Y597 815 aa11.47□□□□□ -0.57
RFFL-205ENST00000415395 FAM95CA0A1B0GW59 222 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms