RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 TRAV20A0A0B4J274 112 aa20.23■□□□□ 0.83
AP1S3-205ENST00000415298 PIRO00625 290 aa20.23■□□□□ 0.83
AP1S3-205ENST00000415298 ABCB7O75027 752 aa20.23■□□□□ 0.83
AP1S3-205ENST00000415298 CPNE3O75131 537 aaKnown RBP20.23■□□□□ 0.83
AP1S3-205ENST00000415298 HOXD4P09016 255 aaPredicted RBP20.23■□□□□ 0.83
AP1S3-205ENST00000415298 COX4I1P13073 169 aa20.23■□□□□ 0.83
AP1S3-205ENST00000415298 IL12AP29459 219 aa20.23■□□□□ 0.83
AP1S3-205ENST00000415298 RPP38P78345 283 aaKnown RBP20.23■□□□□ 0.83
AP1S3-205ENST00000415298 RBP5P82980 135 aa20.23■□□□□ 0.83
AP1S3-205ENST00000415298 INCA1Q0VD86 236 aa20.23■□□□□ 0.83
AP1S3-205ENST00000415298 PEX6Q13608 980 aa20.23■□□□□ 0.83
AP1S3-205ENST00000415298 CCDC142Q17RM4 750 aa20.23■□□□□ 0.83
AP1S3-205ENST00000415298 FAM214AQ32MH5 1076 aa20.23■□□□□ 0.83
AP1S3-205ENST00000415298 PAN2Q504Q3 1202 aaKnown RBP20.23■□□□□ 0.83
AP1S3-205ENST00000415298 TEX44Q53QW1 395 aa20.23■□□□□ 0.83
AP1S3-205ENST00000415298 RBM20Q5T481 1227 aaKnown RBP20.23■□□□□ 0.83
AP1S3-205ENST00000415298 ABRAXAS1Q6UWZ7 409 aa20.23■□□□□ 0.83
AP1S3-205ENST00000415298 ZBTB49Q6ZSB9 765 aa20.23■□□□□ 0.83
AP1S3-205ENST00000415298 PALM2Q8IXS6 379 aa20.23■□□□□ 0.83
AP1S3-205ENST00000415298 C3orf58Q8NDZ4 430 aa20.23■□□□□ 0.83
AP1S3-205ENST00000415298 DHRS4Q9BTZ2 278 aa20.23■□□□□ 0.83
AP1S3-205ENST00000415298 C9orf16Q9BUW7 83 aa20.23■□□□□ 0.83
AP1S3-205ENST00000415298 LRFN2Q9ULH4 789 aa20.23■□□□□ 0.83
AP1S3-205ENST00000415298 RPH3AQ9Y2J0 694 aaPredicted RBP20.23■□□□□ 0.83
AP1S3-205ENST00000415298 GMPPBQ9Y5P6 360 aa20.23■□□□□ 0.83
AP1S3-205ENST00000415298 RPS17P08708 135 aaKnown RBP20.23■□□□□ 0.83
AP1S3-205ENST00000415298 F8A1P23610 371 aa20.23■□□□□ 0.83
AP1S3-205ENST00000415298 RAP1GAPP47736 663 aa20.23■□□□□ 0.83
AP1S3-205ENST00000415298 PIGGQ5H8A4 983 aa20.23■□□□□ 0.83
AP1S3-205ENST00000415298 C16orf89Q6UX73 402 aa20.23■□□□□ 0.83
AP1S3-205ENST00000415298 LGI2Q8N0V4 545 aa20.23■□□□□ 0.83
AP1S3-205ENST00000415298 AKAP1Q92667 903 aaKnown RBP eCLIP20.23■□□□□ 0.83
AP1S3-205ENST00000415298 CD101Q93033 1021 aa20.23■□□□□ 0.83
AP1S3-205ENST00000415298 PRELID3BQ9Y3B1 194 aa20.23■□□□□ 0.83
AP1S3-205ENST00000415298 ZBBXA8MT70 800 aa20.22■□□□□ 0.83
AP1S3-205ENST00000415298 F8W036 122 aa20.22■□□□□ 0.83
AP1S3-205ENST00000415298 MYL4P12829 197 aa20.22■□□□□ 0.83
AP1S3-205ENST00000415298 SOX11P35716 441 aa20.22■□□□□ 0.83
AP1S3-205ENST00000415298 MS4A2Q01362 244 aa20.22■□□□□ 0.83
AP1S3-205ENST00000415298 TRIM25Q14258 630 aaKnown RBP20.22■□□□□ 0.83
AP1S3-205ENST00000415298 SEMA3AQ14563 771 aa20.22■□□□□ 0.83
AP1S3-205ENST00000415298 STEAP3Q658P3 488 aa20.22■□□□□ 0.83
AP1S3-205ENST00000415298 DSELQ8IZU8 1212 aa20.22■□□□□ 0.83
AP1S3-205ENST00000415298 MFSD2AQ8NA29 543 aa20.22■□□□□ 0.83
AP1S3-205ENST00000415298 KCT2Q8NC54 265 aa20.22■□□□□ 0.83
AP1S3-205ENST00000415298 CASD1Q96PB1 797 aa20.22■□□□□ 0.83
AP1S3-205ENST00000415298 ELAC1Q9H777 363 aaKnown RBP20.22■□□□□ 0.83
AP1S3-205ENST00000415298 IL23AQ9NPF7 189 aa20.22■□□□□ 0.83
AP1S3-205ENST00000415298 TBC1D13Q9NVG8 400 aa20.22■□□□□ 0.83
AP1S3-205ENST00000415298 TRMT6Q9UJA5 497 aaKnown RBP20.22■□□□□ 0.83
AP1S3-205ENST00000415298 CDH23Q9H251 3354 aa20.22■□□□□ 0.83
AP1S3-205ENST00000415298 ARHGEF9O43307 516 aa20.22■□□□□ 0.83
AP1S3-205ENST00000415298 PPM1BO75688 479 aa20.22■□□□□ 0.83
AP1S3-205ENST00000415298 STAU1O95793 577 aaKnown RBP20.22■□□□□ 0.83
AP1S3-205ENST00000415298 IL7P13232 177 aa20.22■□□□□ 0.83
AP1S3-205ENST00000415298 MAOBP27338 520 aa20.22■□□□□ 0.83
AP1S3-205ENST00000415298 TEKQ02763 1124 aa20.22■□□□□ 0.83
AP1S3-205ENST00000415298 FASTKD3Q14CZ7 662 aaKnown RBP20.22■□□□□ 0.83
AP1S3-205ENST00000415298 DGUOKQ16854 277 aa20.22■□□□□ 0.83
AP1S3-205ENST00000415298 NOMO2Q5JPE7 1267 aa20.22■□□□□ 0.83
AP1S3-205ENST00000415298 ZNF773Q6PK81 442 aa20.22■□□□□ 0.83
AP1S3-205ENST00000415298 ARCQ7LC44 396 aa20.22■□□□□ 0.83
AP1S3-205ENST00000415298 CELF2-AS1Q8N7Q2 184 aa20.22■□□□□ 0.83
AP1S3-205ENST00000415298 HASPINQ8TF76 798 aa20.22■□□□□ 0.83
AP1S3-205ENST00000415298 KLHL6Q8WZ60 621 aa20.22■□□□□ 0.83
AP1S3-205ENST00000415298 FKBP10Q96AY3 582 aa20.22■□□□□ 0.83
AP1S3-205ENST00000415298 LHX5Q9H2C1 402 aa20.22■□□□□ 0.83
AP1S3-205ENST00000415298 IARS2Q9NSE4 1012 aaKnown RBP20.22■□□□□ 0.83
AP1S3-205ENST00000415298 PCDHGC3Q9UN70 934 aa20.22■□□□□ 0.83
AP1S3-205ENST00000415298 I3L521 148 aa20.21■□□□□ 0.83
AP1S3-205ENST00000415298 NDUFS6O75380 124 aaKnown RBP20.21■□□□□ 0.83
AP1S3-205ENST00000415298 SNAPINO95295 136 aa20.21■□□□□ 0.83
AP1S3-205ENST00000415298 CD58P19256 250 aa20.21■□□□□ 0.83
AP1S3-205ENST00000415298 FGFR3P22607 806 aa20.21■□□□□ 0.83
AP1S3-205ENST00000415298 POLR2IP36954 125 aaKnown RBP20.21■□□□□ 0.83
AP1S3-205ENST00000415298 ASPAP45381 313 aa20.21■□□□□ 0.83
AP1S3-205ENST00000415298 CUL2Q13617 745 aa20.21■□□□□ 0.83
AP1S3-205ENST00000415298 ADGRF2Q8IZF7 708 aa20.21■□□□□ 0.83
AP1S3-205ENST00000415298 TNS4Q8IZW8 715 aa20.21■□□□□ 0.83
AP1S3-205ENST00000415298 ZBTB44Q8NCP5 570 aa20.21■□□□□ 0.83
AP1S3-205ENST00000415298 WDR48Q8TAF3 677 aa20.21■□□□□ 0.83
AP1S3-205ENST00000415298 LRTOMTQ8WZ04 291 aa20.21■□□□□ 0.83
AP1S3-205ENST00000415298 TBATAQ96M53 351 aa20.21■□□□□ 0.83
AP1S3-205ENST00000415298 MOGAT1Q96PD6 335 aa20.21■□□□□ 0.83
AP1S3-205ENST00000415298 PAFAH2Q99487 392 aa20.21■□□□□ 0.83
AP1S3-205ENST00000415298 HTATIP2Q9BUP3 242 aa20.21■□□□□ 0.83
AP1S3-205ENST00000415298 LHPPQ9H008 270 aa20.21■□□□□ 0.83
AP1S3-205ENST00000415298 SDCBP2Q9H190 292 aa20.21■□□□□ 0.83
AP1S3-205ENST00000415298 PPP1R14DQ9NXH3 145 aa20.21■□□□□ 0.83
AP1S3-205ENST00000415298 CXXC1Q9P0U4 656 aaPredicted RBP20.21■□□□□ 0.83
AP1S3-205ENST00000415298 MTHFRP42898 656 aa20.21■□□□□ 0.83
AP1S3-205ENST00000415298 SEPHS1P49903 392 aa20.21■□□□□ 0.83
AP1S3-205ENST00000415298 WDR5P61964 334 aaKnown RBP20.21■□□□□ 0.83
AP1S3-205ENST00000415298 FPGSQ05932 587 aa20.21■□□□□ 0.83
AP1S3-205ENST00000415298 TCEAL1Q15170 157 aa20.21■□□□□ 0.83
AP1S3-205ENST00000415298 ZNF667Q5HYK9 610 aa20.21■□□□□ 0.83
AP1S3-205ENST00000415298 BRAT1Q6PJG6 821 aa20.21■□□□□ 0.83
AP1S3-205ENST00000415298 OR4M2Q8NGB6 313 aa20.21■□□□□ 0.83
AP1S3-205ENST00000415298 ATG4AQ8WYN0 398 aa20.21■□□□□ 0.83
AP1S3-205ENST00000415298 ADI1Q9BV57 179 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms