RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 TRIM74Q86UV6 250 aa11.77□□□□□ -0.53
ATG4B-207ENST00000415107 LRRTM4Q86VH4 590 aa11.77□□□□□ -0.53
ATG4B-207ENST00000415107 GALNT13Q8IUC8 556 aa11.77□□□□□ -0.53
ATG4B-207ENST00000415107 HID1Q8IV36 788 aa11.77□□□□□ -0.53
ATG4B-207ENST00000415107 ZNF547Q8IVP9 402 aa11.77□□□□□ -0.53
ATG4B-207ENST00000415107 RBFAQ8N0V3 343 aa11.77□□□□□ -0.53
ATG4B-207ENST00000415107 SLC25A45Q8N413 288 aa11.77□□□□□ -0.53
ATG4B-207ENST00000415107 FAM181AQ8N9Y4 354 aa11.77□□□□□ -0.53
ATG4B-207ENST00000415107 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.77□□□□□ -0.53
ATG4B-207ENST00000415107 OR4C6Q8NH72 309 aa11.77□□□□□ -0.53
ATG4B-207ENST00000415107 CALML6Q8TD86 181 aa11.77□□□□□ -0.53
ATG4B-207ENST00000415107 TSACCQ96A04 125 aaPredicted RBP11.77□□□□□ -0.53
ATG4B-207ENST00000415107 CARS2Q9HA77 564 aaKnown RBP11.77□□□□□ -0.53
ATG4B-207ENST00000415107 UGT1A7Q9HAW7 530 aa11.77□□□□□ -0.53
ATG4B-207ENST00000415107 UGT1A10Q9HAW8 530 aa11.77□□□□□ -0.53
ATG4B-207ENST00000415107 UGT1A8Q9HAW9 530 aa11.77□□□□□ -0.53
ATG4B-207ENST00000415107 PLAC1Q9HBJ0 212 aa11.77□□□□□ -0.53
ATG4B-207ENST00000415107 EPB41L5Q9HCM4 733 aa11.77□□□□□ -0.53
ATG4B-207ENST00000415107 CYP4F12Q9HCS2 524 aa11.77□□□□□ -0.53
ATG4B-207ENST00000415107 MRPL40Q9NQ50 206 aaKnown RBP11.77□□□□□ -0.53
ATG4B-207ENST00000415107 NLGN3Q9NZ94 848 aa11.77□□□□□ -0.53
ATG4B-207ENST00000415107 VPS9D1Q9Y2B5 631 aa11.77□□□□□ -0.53
ATG4B-207ENST00000415107 MAD1L1Q9Y6D9 718 aa11.77□□□□□ -0.53
ATG4B-207ENST00000415107 PTPRZ1P23471 2315 aaPredicted RBP11.76□□□□□ -0.53
ATG4B-207ENST00000415107 C17orf113A0A1B0GUU1 675 aa11.76□□□□□ -0.53
ATG4B-207ENST00000415107 ESYT3A0FGR9 886 aa11.76□□□□□ -0.53
ATG4B-207ENST00000415107 C4orf47A7E2U8 309 aa11.76□□□□□ -0.53
ATG4B-207ENST00000415107 F8W8V4 182 aa11.76□□□□□ -0.53
ATG4B-207ENST00000415107 PFDN6O15212 129 aa11.76□□□□□ -0.53
ATG4B-207ENST00000415107 KMOO15229 486 aa11.76□□□□□ -0.53
ATG4B-207ENST00000415107 CD3EAPO15446 510 aaKnown RBP11.76□□□□□ -0.53
ATG4B-207ENST00000415107 GRID2O43424 1007 aa11.76□□□□□ -0.53
ATG4B-207ENST00000415107 GDF9O60383 454 aa11.76□□□□□ -0.53
ATG4B-207ENST00000415107 CBFA2T3O75081 653 aa11.76□□□□□ -0.53
ATG4B-207ENST00000415107 SPAG6O75602 509 aa11.76□□□□□ -0.53
ATG4B-207ENST00000415107 VAPBO95292 243 aa11.76□□□□□ -0.53
ATG4B-207ENST00000415107 GSTA2P09210 222 aa11.76□□□□□ -0.53
ATG4B-207ENST00000415107 ATP1B2P14415 290 aaPredicted RBP11.76□□□□□ -0.53
ATG4B-207ENST00000415107 MSH3P20585 1137 aa11.76□□□□□ -0.53
ATG4B-207ENST00000415107 CSRP1P21291 193 aaKnown RBP11.76□□□□□ -0.53
ATG4B-207ENST00000415107 TNFRSF8P28908 595 aa11.76□□□□□ -0.53
ATG4B-207ENST00000415107 ELK3P41970 407 aa11.76□□□□□ -0.53
ATG4B-207ENST00000415107 ILF2Q12905 390 aaKnown RBP11.76□□□□□ -0.53
ATG4B-207ENST00000415107 ILF3Q12906 894 aaKnown RBP eCLIP11.76□□□□□ -0.53
ATG4B-207ENST00000415107 PDIA2Q13087 525 aaKnown RBP11.76□□□□□ -0.53
ATG4B-207ENST00000415107 LONRF1Q17RB8 773 aa11.76□□□□□ -0.53
ATG4B-207ENST00000415107 PRRT3Q5FWE3 981 aa11.76□□□□□ -0.53
ATG4B-207ENST00000415107 ZRANB3Q5FWF4 1079 aa11.76□□□□□ -0.53
ATG4B-207ENST00000415107 KIAA0408Q6ZU52 694 aa11.76□□□□□ -0.53
ATG4B-207ENST00000415107 LRRC6Q86X45 466 aa11.76□□□□□ -0.53
ATG4B-207ENST00000415107 GKN2Q86XP6 184 aa11.76□□□□□ -0.53
ATG4B-207ENST00000415107 CILP2Q8IUL8 1156 aa11.76□□□□□ -0.53
ATG4B-207ENST00000415107 IGDCC3Q8IVU1 814 aa11.76□□□□□ -0.53
ATG4B-207ENST00000415107 IFT20Q8IY31 132 aa11.76□□□□□ -0.53
ATG4B-207ENST00000415107 KIAA2013Q8IYS2 634 aa11.76□□□□□ -0.53
ATG4B-207ENST00000415107 OR6P1Q8NGX9 317 aa11.76□□□□□ -0.53
ATG4B-207ENST00000415107 GABPB2Q8TAK5 448 aaPredicted RBP11.76□□□□□ -0.53
ATG4B-207ENST00000415107 GSDMBQ8TAX9 411 aa11.76□□□□□ -0.53
ATG4B-207ENST00000415107 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.76□□□□□ -0.536e-11■■■■■ 51.9
ATG4B-207ENST00000415107 TTC25Q96NG3 672 aa11.76□□□□□ -0.53
ATG4B-207ENST00000415107 FAM167BQ9BTA0 163 aa11.76□□□□□ -0.53
ATG4B-207ENST00000415107 GSDMCQ9BYG8 508 aa11.76□□□□□ -0.53
ATG4B-207ENST00000415107 CLPBQ9H078 707 aa11.76□□□□□ -0.53
ATG4B-207ENST00000415107 TMEM168Q9H0V1 697 aa11.76□□□□□ -0.53
ATG4B-207ENST00000415107 OR2AG1Q9H205 316 aa11.76□□□□□ -0.53
ATG4B-207ENST00000415107 TCEAL2Q9H3H9 227 aaPredicted RBP11.76□□□□□ -0.53
ATG4B-207ENST00000415107 INTS10Q9NVR2 710 aaKnown RBP11.76□□□□□ -0.53
ATG4B-207ENST00000415107 NCKIPSDQ9NZQ3 722 aa11.76□□□□□ -0.53
ATG4B-207ENST00000415107 MTRF1LQ9UGC7 380 aaKnown RBP11.76□□□□□ -0.53
ATG4B-207ENST00000415107 ZC3H7BQ9UGR2 993 aaKnown RBP11.76□□□□□ -0.53
ATG4B-207ENST00000415107 PCOLCE2Q9UKZ9 415 aa11.76□□□□□ -0.53
ATG4B-207ENST00000415107 TMEM98Q9Y2Y6 226 aa11.76□□□□□ -0.53
ATG4B-207ENST00000415107 ASCC3Q8N3C0 2202 aaKnown RBP11.76□□□□□ -0.53
ATG4B-207ENST00000415107 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.75□□□□□ -0.53
ATG4B-207ENST00000415107 OR51F1A6NGY5 319 aa11.75□□□□□ -0.53
ATG4B-207ENST00000415107 SLU7O95391 586 aaKnown RBP11.75□□□□□ -0.53
ATG4B-207ENST00000415107 ASMTLO95671 621 aa11.75□□□□□ -0.53
ATG4B-207ENST00000415107 ALPPL2P10696 532 aa11.75□□□□□ -0.53
ATG4B-207ENST00000415107 CTSEP14091 401 aa11.75□□□□□ -0.53
ATG4B-207ENST00000415107 ZNF7P17097 686 aaPredicted RBP11.75□□□□□ -0.53
ATG4B-207ENST00000415107 GNPDA1P46926 289 aa11.75□□□□□ -0.53
ATG4B-207ENST00000415107 POLD2P49005 469 aa11.75□□□□□ -0.53
ATG4B-207ENST00000415107 CDKN1CP49918 316 aaPredicted RBP11.75□□□□□ -0.53
ATG4B-207ENST00000415107 CTSCP53634 463 aa11.75□□□□□ -0.53
ATG4B-207ENST00000415107 BNIP3Q12983 259 aa11.75□□□□□ -0.53
ATG4B-207ENST00000415107 SEMA3AQ14563 771 aa11.75□□□□□ -0.53
ATG4B-207ENST00000415107 TRADDQ15628 312 aa11.75□□□□□ -0.53
ATG4B-207ENST00000415107 ZNF658BQ4V348 819 aaPredicted RBP11.75□□□□□ -0.53
ATG4B-207ENST00000415107 C6orf132Q5T0Z8 1188 aa11.75□□□□□ -0.53
ATG4B-207ENST00000415107 NEPROQ6NW34 567 aa11.75□□□□□ -0.53
ATG4B-207ENST00000415107 ZCCHC8Q6NZY4 707 aaKnown RBP11.75□□□□□ -0.53
ATG4B-207ENST00000415107 OGFOD3Q6PK18 319 aa11.75□□□□□ -0.53
ATG4B-207ENST00000415107 DOK6Q6PKX4 331 aa11.75□□□□□ -0.53
ATG4B-207ENST00000415107 WASH2PQ6VEQ5 465 aa11.75□□□□□ -0.53
ATG4B-207ENST00000415107 UNC5AQ6ZN44 842 aa11.75□□□□□ -0.53
ATG4B-207ENST00000415107 SDCCAG8Q86SQ7 713 aaPredicted RBP11.75□□□□□ -0.53
ATG4B-207ENST00000415107 GLRX5Q86SX6 157 aa11.75□□□□□ -0.53
ATG4B-207ENST00000415107 ALYREFQ86V81 257 aaKnown RBP11.75□□□□□ -0.53
ATG4B-207ENST00000415107 C17orf82Q86X59 251 aaPredicted RBP11.75□□□□□ -0.53
ATG4B-207ENST00000415107 NRROSQ86YC3 692 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms