RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 TMEM154Q6P9G4 183 aa15.38■□□□□ 0.05
SHMT2-202ENST00000414700 KIAA0408Q6ZU52 694 aa15.38■□□□□ 0.05
SHMT2-202ENST00000414700 CMC1Q7Z7K0 106 aa15.38■□□□□ 0.05
SHMT2-202ENST00000414700 C4orf33Q8N1A6 199 aa15.38■□□□□ 0.05
SHMT2-202ENST00000414700 FRMD1Q8N878 549 aa15.38■□□□□ 0.05
SHMT2-202ENST00000414700 TMEM237Q96Q45 408 aa15.38■□□□□ 0.05
SHMT2-202ENST00000414700 TPSD1Q9BZJ3 242 aa15.38■□□□□ 0.05
SHMT2-202ENST00000414700 TRIM4Q9C037 500 aa15.38■□□□□ 0.05
SHMT2-202ENST00000414700 CHRDQ9H2X0 955 aa15.38■□□□□ 0.05
SHMT2-202ENST00000414700 VCXQ9H320 206 aa15.38■□□□□ 0.05
SHMT2-202ENST00000414700 NSMCE4AQ9NXX6 385 aa15.38■□□□□ 0.05
SHMT2-202ENST00000414700 TRBV5-4A0A0C4DH59 114 aa15.38■□□□□ 0.05
SHMT2-202ENST00000414700 UBA6A0AVT1 1052 aaPredicted RBP15.38■□□□□ 0.05
SHMT2-202ENST00000414700 RFPL1O75677 317 aa15.38■□□□□ 0.05
SHMT2-202ENST00000414700 SOD1P00441 154 aa15.38■□□□□ 0.05
SHMT2-202ENST00000414700 ITGALP20701 1170 aa15.38■□□□□ 0.05
SHMT2-202ENST00000414700 SAT1P21673 171 aa15.38■□□□□ 0.05
SHMT2-202ENST00000414700 SPRP35270 261 aaPredicted RBP15.38■□□□□ 0.05
SHMT2-202ENST00000414700 SERPINB9P50453 376 aa15.38■□□□□ 0.05
SHMT2-202ENST00000414700 DCDC1P59894 354 aa15.38■□□□□ 0.05
SHMT2-202ENST00000414700 DBN1Q16643 649 aa15.38■□□□□ 0.05
SHMT2-202ENST00000414700 WASHC2DQ5SRD0 308 aa15.38■□□□□ 0.05
SHMT2-202ENST00000414700 ZNF549Q6P9A3 640 aa15.38■□□□□ 0.05
SHMT2-202ENST00000414700 USP30Q70CQ3 517 aa15.38■□□□□ 0.05
SHMT2-202ENST00000414700 SDCCAG8Q86SQ7 713 aaPredicted RBP15.38■□□□□ 0.05
SHMT2-202ENST00000414700 TSTD1Q8NFU3 115 aa15.38■□□□□ 0.05
SHMT2-202ENST00000414700 CFAP61Q8NHU2 1237 aa15.38■□□□□ 0.05
SHMT2-202ENST00000414700 LPGAT1Q92604 370 aa15.38■□□□□ 0.05
SHMT2-202ENST00000414700 INPP5DQ92835 1189 aa15.38■□□□□ 0.05
SHMT2-202ENST00000414700 FUBP1Q96AE4 644 aaKnown RBP15.38■□□□□ 0.05
SHMT2-202ENST00000414700 AP2M1Q96CW1 435 aa15.38■□□□□ 0.05
SHMT2-202ENST00000414700 TRAPPC9Q96Q05 1148 aa15.38■□□□□ 0.05
SHMT2-202ENST00000414700 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.38■□□□□ 0.056e-6■■□□□ 12.1
SHMT2-202ENST00000414700 TBC1D3DA0A087WVF3 549 aa15.37■□□□□ 0.05
SHMT2-202ENST00000414700 TBC1D3IA0A087WXS9 549 aa15.37■□□□□ 0.05
SHMT2-202ENST00000414700 TBC1D3EA0A087X179 549 aa15.37■□□□□ 0.05
SHMT2-202ENST00000414700 TBC1D3KA0A087X1G2 549 aa15.37■□□□□ 0.05
SHMT2-202ENST00000414700 TBC1D3FA6NER0 549 aaPredicted RBP15.37■□□□□ 0.05
SHMT2-202ENST00000414700 TBC1D3LB9A6J9 549 aa15.37■□□□□ 0.05
SHMT2-202ENST00000414700 TPP1O14773 563 aa15.37■□□□□ 0.05
SHMT2-202ENST00000414700 MAP3K13O43283 966 aa15.37■□□□□ 0.05
SHMT2-202ENST00000414700 ATG13O75143 517 aa15.37■□□□□ 0.05
SHMT2-202ENST00000414700 TOP3BO95985 862 aaKnown RBP15.37■□□□□ 0.05
SHMT2-202ENST00000414700 TBC1D3HP0C7X1 549 aa15.37■□□□□ 0.05
SHMT2-202ENST00000414700 MAT2AP31153 395 aaKnown RBP15.37■□□□□ 0.05
SHMT2-202ENST00000414700 PPP2CBP62714 309 aa15.37■□□□□ 0.05
SHMT2-202ENST00000414700 PPP2CAP67775 309 aa15.37■□□□□ 0.05
SHMT2-202ENST00000414700 CREB5Q02930 508 aa15.37■□□□□ 0.05
SHMT2-202ENST00000414700 ZNF460Q14592 562 aa15.37■□□□□ 0.05
SHMT2-202ENST00000414700 TJAP1Q5JTD0 557 aa15.37■□□□□ 0.05
SHMT2-202ENST00000414700 TBC1D3GQ6DHY5 549 aa15.37■□□□□ 0.05
SHMT2-202ENST00000414700 TBC1D3CQ6IPX1 549 aa15.37■□□□□ 0.05
SHMT2-202ENST00000414700 CGB2Q6NT52 195 aa15.37■□□□□ 0.05
SHMT2-202ENST00000414700 IRGCQ6NXR0 463 aa15.37■□□□□ 0.05
SHMT2-202ENST00000414700 KBTBD6Q86V97 674 aa15.37■□□□□ 0.05
SHMT2-202ENST00000414700 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.37■□□□□ 0.05
SHMT2-202ENST00000414700 TBC1D3Q8IZP1 549 aaPredicted RBP15.37■□□□□ 0.05
SHMT2-202ENST00000414700 NXPE1Q8N323 547 aa15.37■□□□□ 0.05
SHMT2-202ENST00000414700 DNAJC9Q8WXX5 260 aa15.37■□□□□ 0.05
SHMT2-202ENST00000414700 FAM136AQ96C01 138 aa15.37■□□□□ 0.05
SHMT2-202ENST00000414700 NUS1Q96E22 293 aa15.37■□□□□ 0.05
SHMT2-202ENST00000414700 GPR22Q99680 433 aa15.37■□□□□ 0.05
SHMT2-202ENST00000414700 MBD1Q9UIS9 605 aaPredicted RBP15.37■□□□□ 0.05
SHMT2-202ENST00000414700 CRLS1Q9UJA2 301 aa15.37■□□□□ 0.05
SHMT2-202ENST00000414700 SLC39A10Q9ULF5 831 aa15.37■□□□□ 0.05
SHMT2-202ENST00000414700 FZD4Q9ULV1 537 aa15.37■□□□□ 0.05
SHMT2-202ENST00000414700 SDK1Q7Z5N4 2213 aa15.37■□□□□ 0.05
SHMT2-202ENST00000414700 FAM95CA0A1B0GW59 222 aa15.36■□□□□ 0.05
SHMT2-202ENST00000414700 A0A1W2PQU0 124 aa15.36■□□□□ 0.05
SHMT2-202ENST00000414700 MTX2O75431 263 aa15.36■□□□□ 0.05
SHMT2-202ENST00000414700 NDUFS3O75489 264 aa15.36■□□□□ 0.05
SHMT2-202ENST00000414700 TM7SF2O76062 418 aa15.36■□□□□ 0.05
SHMT2-202ENST00000414700 PAK4O96013 591 aaPredicted RBP15.36■□□□□ 0.05
SHMT2-202ENST00000414700 KRT4P19013 534 aa15.36■□□□□ 0.05
SHMT2-202ENST00000414700 ACRV1P26436 265 aa15.36■□□□□ 0.05
SHMT2-202ENST00000414700 TTPAP49638 278 aa15.36■□□□□ 0.05
SHMT2-202ENST00000414700 PTPN5P54829 565 aa15.36■□□□□ 0.05
SHMT2-202ENST00000414700 SIGLEC14Q08ET2 396 aa15.36■□□□□ 0.05
SHMT2-202ENST00000414700 CUL3Q13618 768 aa15.36■□□□□ 0.05
SHMT2-202ENST00000414700 TBC1D25Q3MII6 688 aa15.36■□□□□ 0.05
SHMT2-202ENST00000414700 KHDC1Q4VXA5 237 aaKnown RBP15.36■□□□□ 0.05
SHMT2-202ENST00000414700 PPM1JQ5JR12 505 aa15.36■□□□□ 0.05
SHMT2-202ENST00000414700 SH2D5Q6ZV89 423 aa15.36■□□□□ 0.05
SHMT2-202ENST00000414700 CYP2U1Q7Z449 544 aa15.36■□□□□ 0.05
SHMT2-202ENST00000414700 GALNT7Q86SF2 657 aa15.36■□□□□ 0.05
SHMT2-202ENST00000414700 SLC41A1Q8IVJ1 513 aa15.36■□□□□ 0.05
SHMT2-202ENST00000414700 CEP97Q8IW35 865 aa15.36■□□□□ 0.05
SHMT2-202ENST00000414700 FAM160A2Q8N612 972 aaPredicted RBP15.36■□□□□ 0.05
SHMT2-202ENST00000414700 CLDN19Q8N6F1 224 aa15.36■□□□□ 0.05
SHMT2-202ENST00000414700 PLA2G15Q8NCC3 412 aa15.36■□□□□ 0.05
SHMT2-202ENST00000414700 RLN3Q8WXF3 142 aa15.36■□□□□ 0.05
SHMT2-202ENST00000414700 MAGEB18Q96M61 343 aa15.36■□□□□ 0.05
SHMT2-202ENST00000414700 BIRC8Q96P09 236 aa15.36■□□□□ 0.05
SHMT2-202ENST00000414700 OLFM1Q99784 485 aa15.36■□□□□ 0.05
SHMT2-202ENST00000414700 ITM2CQ9NQX7 267 aa15.36■□□□□ 0.05
SHMT2-202ENST00000414700 USP36Q9P275 1121 aaKnown RBP15.36■□□□□ 0.05
SHMT2-202ENST00000414700 NFKBIL1Q9UBC1 381 aaPredicted RBP15.36■□□□□ 0.05
SHMT2-202ENST00000414700 NCKAP1Q9Y2A7 1128 aa15.36■□□□□ 0.05
SHMT2-202ENST00000414700 EML5Q05BV3 1969 aa15.36■□□□□ 0.05
SHMT2-202ENST00000414700 FRYLO94915 3013 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms