RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, human

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF1-206	ENST00000413725	GSTA2	P09210	222 aa		13	□□□□□ -0.33
SF1-206	ENST00000413725	PRSS56	P0CW18	603 aa		13	□□□□□ -0.33
SF1-206	ENST00000413725	ZNF8	P17098	575 aa	Predicted RBP	13	□□□□□ -0.33
SF1-206	ENST00000413725	OGN	P20774	298 aa	Known RBP	13	□□□□□ -0.33
SF1-206	ENST00000413725	ARNT	P27540	789 aa		13	□□□□□ -0.33
SF1-206	ENST00000413725	CA5A	P35218	305 aa		13	□□□□□ -0.33
SF1-206	ENST00000413725	MAGEA4	P43358	317 aa		13	□□□□□ -0.33
SF1-206	ENST00000413725	ARCN1	P48444	511 aa	Known RBP	13	□□□□□ -0.33
SF1-206	ENST00000413725	ELOC	Q15369	112 aa		13	□□□□□ -0.33
SF1-206	ENST00000413725	DBN1	Q16643	649 aa		13	□□□□□ -0.33
SF1-206	ENST00000413725	KHDC1	Q4VXA5	237 aa	Known RBP	13	□□□□□ -0.33
SF1-206	ENST00000413725	PRRT3	Q5FWE3	981 aa		13	□□□□□ -0.33
SF1-206	ENST00000413725	RNF187	Q5TA31	235 aa	Predicted RBP	13	□□□□□ -0.33
SF1-206	ENST00000413725	NEPRO	Q6NW34	567 aa		13	□□□□□ -0.33
SF1-206	ENST00000413725	KCNMB4	Q86W47	210 aa		13	□□□□□ -0.33
SF1-206	ENST00000413725	TRAPPC5	Q8IUR0	188 aa		13	□□□□□ -0.33
SF1-206	ENST00000413725	RBFA	Q8N0V3	343 aa		13	□□□□□ -0.33
SF1-206	ENST00000413725	FSTL5	Q8N475	847 aa	Predicted RBP	13	□□□□□ -0.33
SF1-206	ENST00000413725	EIF1AD	Q8N9N8	165 aa	Known RBP	13	□□□□□ -0.33
SF1-206	ENST00000413725	OR2I1P	Q8NGU4	316 aa		13	□□□□□ -0.33
SF1-206	ENST00000413725	GPR150	Q8NGU9	434 aa		13	□□□□□ -0.33
SF1-206	ENST00000413725	GSDMB	Q8TAX9	411 aa		13	□□□□□ -0.33
SF1-206	ENST00000413725	SCG3	Q8WXD2	468 aa	Known RBP	13	□□□□□ -0.33
SF1-206	ENST00000413725	ZNF514	Q96K75	400 aa	Predicted RBP	13	□□□□□ -0.33
SF1-206	ENST00000413725	OR2M4	Q96R27	311 aa		13	□□□□□ -0.33
SF1-206	ENST00000413725	WDR83	Q9BRX9	315 aa	Known RBP	13	□□□□□ -0.33
SF1-206	ENST00000413725	FAM167B	Q9BTA0	163 aa		13	□□□□□ -0.33
SF1-206	ENST00000413725	IL21R	Q9HBE5	538 aa		13	□□□□□ -0.33
SF1-206	ENST00000413725	TM7SF3	Q9NS93	570 aa		13	□□□□□ -0.33
SF1-206	ENST00000413725	DNAAF2	Q9NVR5	837 aa	Known RBP	13	□□□□□ -0.33
SF1-206	ENST00000413725	TRNAU1AP	Q9NX07	287 aa	Known RBP	13	□□□□□ -0.33
SF1-206	ENST00000413725	ZNHIT2	Q9UHR6	403 aa		13	□□□□□ -0.33
SF1-206	ENST00000413725	KLF15	Q9UIH9	416 aa		13	□□□□□ -0.33
SF1-206	ENST00000413725	NFU1	Q9UMS0	254 aa		13	□□□□□ -0.33
SF1-206	ENST00000413725	VPS9D1	Q9Y2B5	631 aa		13	□□□□□ -0.33
SF1-206	ENST00000413725	GPSM3	Q9Y4H4	160 aa		13	□□□□□ -0.33
SF1-206	ENST00000413725	CNOT1	A5YKK6	2376 aa	Known RBP	13	□□□□□ -0.33
SF1-206	ENST00000413725	RP1	P56715	2156 aa		12.99	□□□□□ -0.33
SF1-206	ENST00000413725	IGLV3-16	A0A075B6K0	115 aa		12.99	□□□□□ -0.33
SF1-206	ENST00000413725	NEMP2	A6NFY4	417 aa		12.99	□□□□□ -0.33
SF1-206	ENST00000413725	GOLGA8K	D6RF30	607 aa		12.99	□□□□□ -0.33
SF1-206	ENST00000413725	GOLGA8T	H3BQL2	631 aa		12.99	□□□□□ -0.33
SF1-206	ENST00000413725	CHUK	O15111	745 aa		12.99	□□□□□ -0.33
SF1-206	ENST00000413725	KMO	O15229	486 aa		12.99	□□□□□ -0.33
SF1-206	ENST00000413725	GRID2	O43424	1007 aa		12.99	□□□□□ -0.33
SF1-206	ENST00000413725	PCDHGA12	O60330	932 aa		12.99	□□□□□ -0.33
SF1-206	ENST00000413725	SDC3	O75056	442 aa		12.99	□□□□□ -0.33
SF1-206	ENST00000413725	DNAJC6	O75061	913 aa		12.99	□□□□□ -0.33
SF1-206	ENST00000413725	NDUFS3	O75489	264 aa		12.99	□□□□□ -0.33
SF1-206	ENST00000413725	PIAS2	O75928	621 aa		12.99	□□□□□ -0.33
SF1-206	ENST00000413725	ATP1B2	P14415	290 aa	Predicted RBP	12.99	□□□□□ -0.33
SF1-206	ENST00000413725	EPHA8	P29322	1005 aa	Predicted RBP	12.99	□□□□□ -0.33
SF1-206	ENST00000413725	ECHS1	P30084	290 aa		12.99	□□□□□ -0.33
SF1-206	ENST00000413725	NSG1	P42857	185 aa		12.99	□□□□□ -0.33
SF1-206	ENST00000413725	IL9R	Q01113	521 aa		12.99	□□□□□ -0.33
SF1-206	ENST00000413725	FRG1	Q14331	258 aa	Known RBP	12.99	□□□□□ -0.33
SF1-206	ENST00000413725	SUZ12	Q15022	739 aa	Known RBP	12.99	□□□□□ -0.33
SF1-206	ENST00000413725	SMAD1	Q15797	465 aa	Known RBP	12.99	□□□□□ -0.33
SF1-206	ENST00000413725	INAVA	Q3KP66	663 aa		12.99	□□□□□ -0.33
SF1-206	ENST00000413725	PYCR3	Q53H96	274 aa		12.99	□□□□□ -0.33
SF1-206	ENST00000413725	ZNF470	Q6ECI4	717 aa		12.99	□□□□□ -0.33
SF1-206	ENST00000413725	CRTC3	Q6UUV7	619 aa		12.99	□□□□□ -0.33
SF1-206	ENST00000413725	PACS1	Q6VY07	963 aa		12.99	□□□□□ -0.33
SF1-206	ENST00000413725	MICALCL	Q6ZW33	695 aa		12.99	□□□□□ -0.33
SF1-206	ENST00000413725	LRRTM4	Q86VH4	590 aa		12.99	□□□□□ -0.33
SF1-206	ENST00000413725	SDR16C5	Q8N3Y7	309 aa		12.99	□□□□□ -0.33
SF1-206	ENST00000413725	RASGEF1A	Q8N9B8	481 aa		12.99	□□□□□ -0.33
SF1-206	ENST00000413725	ZNF548	Q8NEK5	533 aa	Predicted RBP	12.99	□□□□□ -0.33
SF1-206	ENST00000413725	LMX1A	Q8TE12	382 aa		12.99	□□□□□ -0.33
SF1-206	ENST00000413725	CERS2	Q96G23	380 aa		12.99	□□□□□ -0.33
SF1-206	ENST00000413725	C9orf72	Q96LT7	481 aa		12.99	□□□□□ -0.33
SF1-206	ENST00000413725	TCF12	Q99081	682 aa		12.99	□□□□□ -0.33
SF1-206	ENST00000413725	LRRC61	Q9BV99	259 aa		12.99	□□□□□ -0.33
SF1-206	ENST00000413725	GSDMC	Q9BYG8	508 aa		12.99	□□□□□ -0.33
SF1-206	ENST00000413725	TCEAL2	Q9H3H9	227 aa	Predicted RBP	12.99	□□□□□ -0.33
SF1-206	ENST00000413725	PPAN	Q9NQ55	473 aa	Known RBP	12.99	□□□□□ -0.33
SF1-206	ENST00000413725	RXFP3	Q9NSD7	469 aa		12.99	□□□□□ -0.33
SF1-206	ENST00000413725	IL1RAPL1	Q9NZN1	696 aa		12.99	□□□□□ -0.33
SF1-206	ENST00000413725	MARCH4	Q9P2E8	410 aa	Predicted RBP	12.99	□□□□□ -0.33
SF1-206	ENST00000413725	PNMA8B	Q9ULN7	279 aa	Predicted RBP	12.99	□□□□□ -0.33
SF1-206	ENST00000413725	DOLK	Q9UPQ8	538 aa		12.99	□□□□□ -0.33
SF1-206	ENST00000413725	PCDHGB2	Q9Y5G2	931 aa		12.99	□□□□□ -0.33
SF1-206	ENST00000413725	COL5A1	P20908	1838 aa	Predicted RBP	12.99	□□□□□ -0.33
SF1-206	ENST00000413725	QSOX1	O00391	747 aa		12.98	□□□□□ -0.33
SF1-206	ENST00000413725	CDX4	O14627	284 aa	Predicted RBP	12.98	□□□□□ -0.33
SF1-206	ENST00000413725	SCAMP1	O15126	338 aa		12.98	□□□□□ -0.33
SF1-206	ENST00000413725	AQP9	O43315	295 aa		12.98	□□□□□ -0.33
SF1-206	ENST00000413725	SPAG6	O75602	509 aa		12.98	□□□□□ -0.33
SF1-206	ENST00000413725	AP2A2	O94973	939 aa		12.98	□□□□□ -0.33
SF1-206	ENST00000413725	ERVK-10	P10266	1014 aa		12.98	□□□□□ -0.33
SF1-206	ENST00000413725	ZNF7	P17097	686 aa	Predicted RBP	12.98	□□□□□ -0.33
SF1-206	ENST00000413725	VCL	P18206	1134 aa		12.98	□□□□□ -0.33
SF1-206	ENST00000413725	DGKA	P23743	735 aa		12.98	□□□□□ -0.33
SF1-206	ENST00000413725	TNFRSF8	P28908	595 aa		12.98	□□□□□ -0.33
SF1-206	ENST00000413725	B4GALNT1	Q00973	533 aa		12.98	□□□□□ -0.33
SF1-206	ENST00000413725	ILF3	Q12906	894 aa	Known RBP eCLIP	12.98	□□□□□ -0.33
SF1-206	ENST00000413725	SLC14A1	Q13336	389 aa		12.98	□□□□□ -0.33
SF1-206	ENST00000413725	LRP8	Q14114	963 aa		12.98	□□□□□ -0.33
SF1-206	ENST00000413725	SEMA3A	Q14563	771 aa		12.98	□□□□□ -0.33
SF1-206	ENST00000413725	SLMAP	Q14BN4	828 aa		12.98	□□□□□ -0.33

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