RNA–Protein interactions for RNA: ENST00000413658.6

ZNF3-205, Transcript of zinc finger protein 3, human

TSL 1 (best) BASIC

Gene ZNF3, Length 1,441 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNF3-205	ENST00000413658	LONRF1	Q17RB8	773 aa		10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	ALG11	Q2TAA5	492 aa		10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	HLA-B	Q31612	363 aa		10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	SPANXN3	Q5MJ09	141 aa		10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	PRAMEF14	Q5SWL7	426 aa		10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	PARG	Q86W56	976 aa		10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	SERPINA9	Q86WD7	417 aa		10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	CCDC25	Q86WR0	208 aa		10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	RELL1	Q8IUW5	271 aa		10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	KRT222	Q8N1A0	295 aa		10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	EIF1AD	Q8N9N8	165 aa	Known RBP	10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	OR56A4	Q8NGH8	313 aa		10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	OR2I1P	Q8NGU4	316 aa		10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	GPR150	Q8NGU9	434 aa		10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	TSACC	Q96A04	125 aa	Predicted RBP	10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	SKA1	Q96BD8	255 aa		10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	ULK4	Q96C45	1275 aa		10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	CFAP36	Q96G28	342 aa		10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	PDXP	Q96GD0	296 aa		10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	FMO2	Q99518	471 aa		10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	TCEAL2	Q9H3H9	227 aa	Predicted RBP	10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	IL21R	Q9HBE5	538 aa		10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	MRPL40	Q9NQ50	206 aa	Known RBP	10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	VPS18	Q9P253	973 aa		10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	DGKB	Q9Y6T7	804 aa		10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	PRSS38	A1L453	326 aa		10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	CDX4	O14627	284 aa	Predicted RBP	10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	CHUK	O15111	745 aa		10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	GPR37	O15354	613 aa		10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	C1QA	P02745	245 aa		10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	IVL	P07476	585 aa		10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	SYP	P08247	313 aa		10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	FAM153B	P0C7A2	387 aa		10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	NME1	P15531	152 aa	Known RBP	10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	ZNF8	P17098	575 aa	Predicted RBP	10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	PAM	P19021	973 aa		10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	KEL	P23276	732 aa		10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	HTR1B	P28222	390 aa		10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	RXRG	P48443	463 aa		10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	GPX6	P59796	221 aa		10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	TMEM115	Q12893	351 aa	Predicted RBP	10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	HLTF	Q14527	1009 aa	Known RBP eCLIP	10.16	□□□□□ -0.78	3e-9	■□□□□ 10.9
ZNF3-205	ENST00000413658	SMAD1	Q15797	465 aa	Known RBP	10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	ERCC6L	Q2NKX8	1250 aa		10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	TYSND1	Q2T9J0	566 aa		10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	FAM153C	Q494X1	144 aa		10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	ZNF542P	Q5EBM4	170 aa		10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	LDLRAP1	Q5SW96	308 aa		10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	UBAP2	Q5T6F2	1119 aa	Known RBP	10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	TRMT10B	Q6PF06	316 aa	Known RBP	10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	DOK6	Q6PKX4	331 aa		10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	ENPP7	Q6UWV6	458 aa		10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	KANSL1	Q7Z3B3	1105 aa		10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	LDB1	Q86U70	411 aa	Predicted RBP	10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	ZNF547	Q8IVP9	402 aa		10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	RASGEF1A	Q8N9B8	481 aa		10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	PYROXD1	Q8WU10	500 aa		10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	ELF4	Q99607	663 aa	Predicted RBP	10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	BOC	Q9BWV1	1114 aa		10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	TXLNGY	Q9BZA5	131 aa		10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	OR2AG1	Q9H205	316 aa		10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	CATSPERZ	Q9NTU4	200 aa		10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	ZDHHC3	Q9NYG2	299 aa		10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	MOCS1	Q9NZB8	636 aa		10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	KL	Q9UEF7	1012 aa		10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	CRLS1	Q9UJA2	301 aa		10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	ST14	Q9Y5Y6	855 aa		10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658		V9GYY5	206 aa	Predicted RBP	10.16	□□□□□ -0.78
ZNF3-205	ENST00000413658	GOLGA4	Q13439	2230 aa	Known RBP	10.15	□□□□□ -0.79
ZNF3-205	ENST00000413658		A0A1B0GTQ1	180 aa		10.15	□□□□□ -0.79
ZNF3-205	ENST00000413658	GPR89A	B7ZAQ6	455 aa		10.15	□□□□□ -0.79
ZNF3-205	ENST00000413658	VEGFD	O43915	354 aa		10.15	□□□□□ -0.79
ZNF3-205	ENST00000413658	NUAK1	O60285	661 aa		10.15	□□□□□ -0.79
ZNF3-205	ENST00000413658	OR1I1	O60431	355 aa		10.15	□□□□□ -0.79
ZNF3-205	ENST00000413658	GPR89B	P0CG08	455 aa		10.15	□□□□□ -0.79
ZNF3-205	ENST00000413658	ERVK-10	P10266	1014 aa		10.15	□□□□□ -0.79
ZNF3-205	ENST00000413658	SSTR1	P30872	391 aa		10.15	□□□□□ -0.79
ZNF3-205	ENST00000413658	HK3	P52790	923 aa		10.15	□□□□□ -0.79
ZNF3-205	ENST00000413658	CTSC	P53634	463 aa		10.15	□□□□□ -0.79
ZNF3-205	ENST00000413658	PRSS12	P56730	875 aa		10.15	□□□□□ -0.79
ZNF3-205	ENST00000413658	NAA30	Q147X3	362 aa	Predicted RBP	10.15	□□□□□ -0.79
ZNF3-205	ENST00000413658	PYCR3	Q53H96	274 aa		10.15	□□□□□ -0.79
ZNF3-205	ENST00000413658	FASTKD1	Q53R41	847 aa	Known RBP	10.15	□□□□□ -0.79
ZNF3-205	ENST00000413658	LYPLAL1	Q5VWZ2	237 aa		10.15	□□□□□ -0.79
ZNF3-205	ENST00000413658	NEPRO	Q6NW34	567 aa		10.15	□□□□□ -0.79
ZNF3-205	ENST00000413658	IL27RA	Q6UWB1	636 aa		10.15	□□□□□ -0.79
ZNF3-205	ENST00000413658	PACS1	Q6VY07	963 aa		10.15	□□□□□ -0.79
ZNF3-205	ENST00000413658	PRR23C	Q6ZRP0	262 aa		10.15	□□□□□ -0.79
ZNF3-205	ENST00000413658	TAS2R42	Q7RTR8	314 aa		10.15	□□□□□ -0.79
ZNF3-205	ENST00000413658	C11orf96	Q7Z7L8	435 aa		10.15	□□□□□ -0.79
ZNF3-205	ENST00000413658	CILP2	Q8IUL8	1156 aa		10.15	□□□□□ -0.79
ZNF3-205	ENST00000413658	CNTN4	Q8IWV2	1026 aa		10.15	□□□□□ -0.79
ZNF3-205	ENST00000413658	GSPT2	Q8IYD1	628 aa	Known RBP	10.15	□□□□□ -0.79
ZNF3-205	ENST00000413658	PHACTR4	Q8IZ21	702 aa		10.15	□□□□□ -0.79
ZNF3-205	ENST00000413658	RBFA	Q8N0V3	343 aa		10.15	□□□□□ -0.79
ZNF3-205	ENST00000413658	SDR16C5	Q8N3Y7	309 aa		10.15	□□□□□ -0.79
ZNF3-205	ENST00000413658	MINDY1	Q8N5J2	469 aa		10.15	□□□□□ -0.79
ZNF3-205	ENST00000413658	NAT14	Q8WUY8	206 aa		10.15	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms