RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 DMXL2Q8TDJ6 3036 aa10.04□□□□□ -0.8
NCKIPSD-202ENST00000413374 CCDC78A2IDD5 438 aa10.03□□□□□ -0.8
NCKIPSD-202ENST00000413374 C5orf60A6NFR6 353 aa10.03□□□□□ -0.8
NCKIPSD-202ENST00000413374 OR2AG2A6NM03 316 aa10.03□□□□□ -0.8
NCKIPSD-202ENST00000413374 C2orf81A6NN90 581 aa10.03□□□□□ -0.8
NCKIPSD-202ENST00000413374 CDRT15L2A8MXV6 281 aa10.03□□□□□ -0.8
NCKIPSD-202ENST00000413374 GAPDHSO14556 408 aaPredicted RBP10.03□□□□□ -0.8
NCKIPSD-202ENST00000413374 CHUKO15111 745 aa10.03□□□□□ -0.8
NCKIPSD-202ENST00000413374 KRT86O43790 486 aa10.03□□□□□ -0.8
NCKIPSD-202ENST00000413374 VEGFDO43915 354 aa10.03□□□□□ -0.8
NCKIPSD-202ENST00000413374 POP7O75817 140 aaKnown RBP10.03□□□□□ -0.8
NCKIPSD-202ENST00000413374 F3P13726 295 aa10.03□□□□□ -0.8
NCKIPSD-202ENST00000413374 LPOP22079 712 aaPredicted RBP10.03□□□□□ -0.8
NCKIPSD-202ENST00000413374 PBLDP30039 288 aaPredicted RBP10.03□□□□□ -0.8
NCKIPSD-202ENST00000413374 CCKBRP32239 447 aa10.03□□□□□ -0.8
NCKIPSD-202ENST00000413374 GPR3P46089 330 aa10.03□□□□□ -0.8
NCKIPSD-202ENST00000413374 CTSCP53634 463 aa10.03□□□□□ -0.8
NCKIPSD-202ENST00000413374 KLF1Q13351 362 aaPredicted RBP10.03□□□□□ -0.8
NCKIPSD-202ENST00000413374 SNX1Q13596 522 aa10.03□□□□□ -0.8
NCKIPSD-202ENST00000413374 NR1D2Q14995 579 aa10.03□□□□□ -0.8
NCKIPSD-202ENST00000413374 TGIF1Q15583 401 aa10.03□□□□□ -0.8
NCKIPSD-202ENST00000413374 PARP6Q2NL67 630 aa10.03□□□□□ -0.8
NCKIPSD-202ENST00000413374 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.03□□□□□ -0.8
NCKIPSD-202ENST00000413374 GPRC6AQ5T6X5 926 aa10.03□□□□□ -0.8
NCKIPSD-202ENST00000413374 SEL1L2Q5TEA6 688 aa10.03□□□□□ -0.8
NCKIPSD-202ENST00000413374 ARHGAP40Q5TG30 622 aa10.03□□□□□ -0.8
NCKIPSD-202ENST00000413374 PDPK2PQ6A1A2 396 aa10.03□□□□□ -0.8
NCKIPSD-202ENST00000413374 DENND5AQ6IQ26 1287 aa10.03□□□□□ -0.8
NCKIPSD-202ENST00000413374 LRRC8AQ8IWT6 810 aa10.03□□□□□ -0.8
NCKIPSD-202ENST00000413374 BEND7Q8N7W2 519 aaPredicted RBP10.03□□□□□ -0.8
NCKIPSD-202ENST00000413374 RASGEF1AQ8N9B8 481 aa10.03□□□□□ -0.8
NCKIPSD-202ENST00000413374 C1orf54Q8WWF1 131 aa10.03□□□□□ -0.8
NCKIPSD-202ENST00000413374 FCRL3Q96P31 734 aaPredicted RBP10.03□□□□□ -0.8
NCKIPSD-202ENST00000413374 VPS35Q96QK1 796 aa10.03□□□□□ -0.8
NCKIPSD-202ENST00000413374 CMKLR1Q99788 373 aa10.03□□□□□ -0.8
NCKIPSD-202ENST00000413374 TSGA10Q9BZW7 698 aa10.03□□□□□ -0.8
NCKIPSD-202ENST00000413374 ASB8Q9H765 288 aa10.03□□□□□ -0.8
NCKIPSD-202ENST00000413374 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.03□□□□□ -0.8
NCKIPSD-202ENST00000413374 NFKBIL1Q9UBC1 381 aaPredicted RBP10.03□□□□□ -0.8
NCKIPSD-202ENST00000413374 CPNE7Q9UBL6 633 aa10.03□□□□□ -0.8
NCKIPSD-202ENST00000413374 FAM8A1Q9UBU6 413 aa10.03□□□□□ -0.8
NCKIPSD-202ENST00000413374 PSMD13Q9UNM6 376 aa10.03□□□□□ -0.8
NCKIPSD-202ENST00000413374 ASXL3Q9C0F0 2248 aa10.02□□□□□ -0.81
NCKIPSD-202ENST00000413374 A6NCN8 305 aa10.02□□□□□ -0.81
NCKIPSD-202ENST00000413374 OR52A4PA6NMU1 304 aa10.02□□□□□ -0.81
NCKIPSD-202ENST00000413374 ARHGAP6O43182 974 aa10.02□□□□□ -0.81
NCKIPSD-202ENST00000413374 PRAMEF10O60809 474 aa10.02□□□□□ -0.81
NCKIPSD-202ENST00000413374 VIPP01282 170 aa10.02□□□□□ -0.81
NCKIPSD-202ENST00000413374 IFNB1P01574 187 aa10.02□□□□□ -0.81
NCKIPSD-202ENST00000413374 ITGA2BP08514 1039 aa10.02□□□□□ -0.81
NCKIPSD-202ENST00000413374 PRSS56P0CW18 603 aa10.02□□□□□ -0.81
NCKIPSD-202ENST00000413374 ETS1P14921 441 aa10.02□□□□□ -0.81
NCKIPSD-202ENST00000413374 TYRP1P17643 537 aa10.02□□□□□ -0.81
NCKIPSD-202ENST00000413374 MSH3P20585 1137 aa10.02□□□□□ -0.81
NCKIPSD-202ENST00000413374 IDSP22304 550 aa10.02□□□□□ -0.81
NCKIPSD-202ENST00000413374 AKT1P31749 480 aa10.02□□□□□ -0.81
NCKIPSD-202ENST00000413374 CSF2RBP32927 897 aa10.02□□□□□ -0.81
NCKIPSD-202ENST00000413374 SLC19A1P41440 591 aa10.02□□□□□ -0.81
NCKIPSD-202ENST00000413374 LIMK2P53671 638 aa10.02□□□□□ -0.81
NCKIPSD-202ENST00000413374 SRSF6Q13247 344 aaKnown RBP10.02□□□□□ -0.81
NCKIPSD-202ENST00000413374 EIF3IQ13347 325 aaKnown RBP10.02□□□□□ -0.81
NCKIPSD-202ENST00000413374 MSLNQ13421 630 aaPredicted RBP10.02□□□□□ -0.81
NCKIPSD-202ENST00000413374 SEPT6Q14141 434 aa10.02□□□□□ -0.81
NCKIPSD-202ENST00000413374 CLCA4Q14CN2 919 aa10.02□□□□□ -0.81
NCKIPSD-202ENST00000413374 RPS6KA1Q15418 735 aa10.02□□□□□ -0.81
NCKIPSD-202ENST00000413374 TAF1AQ15573 450 aaPredicted RBP10.02□□□□□ -0.81
NCKIPSD-202ENST00000413374 LDLRAP1Q5SW96 308 aa10.02□□□□□ -0.81
NCKIPSD-202ENST00000413374 FNBP1LQ5T0N5 605 aa10.02□□□□□ -0.81
NCKIPSD-202ENST00000413374 BROXQ5VW32 411 aa10.02□□□□□ -0.81
NCKIPSD-202ENST00000413374 ZDHHC20Q5W0Z9 365 aa10.02□□□□□ -0.81
NCKIPSD-202ENST00000413374 TMEM71Q6P5X7 295 aa10.02□□□□□ -0.81
NCKIPSD-202ENST00000413374 ZFAND4Q86XD8 727 aa10.02□□□□□ -0.81
NCKIPSD-202ENST00000413374 TRIM48Q8IWZ4 208 aa10.02□□□□□ -0.81
NCKIPSD-202ENST00000413374 OR10G6Q8NH81 332 aa10.02□□□□□ -0.81
NCKIPSD-202ENST00000413374 SLC35B2Q8TB61 432 aa10.02□□□□□ -0.81
NCKIPSD-202ENST00000413374 BRSK1Q8TDC3 778 aa10.02□□□□□ -0.81
NCKIPSD-202ENST00000413374 JPH3Q8WXH2 748 aaPredicted RBP10.02□□□□□ -0.81
NCKIPSD-202ENST00000413374 RNF31Q96EP0 1072 aa10.02□□□□□ -0.81
NCKIPSD-202ENST00000413374 SGF29Q96ES7 293 aa10.02□□□□□ -0.81
NCKIPSD-202ENST00000413374 CCDC97Q96F63 343 aaPredicted RBP10.02□□□□□ -0.81
NCKIPSD-202ENST00000413374 PRORYQ9H606 182 aa10.02□□□□□ -0.81
NCKIPSD-202ENST00000413374 STN1Q9H668 368 aaKnown RBP10.02□□□□□ -0.81
NCKIPSD-202ENST00000413374 SARS2Q9NP81 518 aaKnown RBP10.02□□□□□ -0.81
NCKIPSD-202ENST00000413374 OCIAD1Q9NX40 245 aa10.02□□□□□ -0.81
NCKIPSD-202ENST00000413374 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.02□□□□□ -0.81
NCKIPSD-202ENST00000413374 FOXJ2Q9P0K8 574 aa10.02□□□□□ -0.81
NCKIPSD-202ENST00000413374 AKAP7Q9P0M2 348 aaPredicted RBP10.02□□□□□ -0.81
NCKIPSD-202ENST00000413374 ZNF624Q9P2J8 865 aaPredicted RBP10.02□□□□□ -0.81
NCKIPSD-202ENST00000413374 ZNF148Q9UQR1 794 aa10.02□□□□□ -0.81
NCKIPSD-202ENST00000413374 WDR37Q9Y2I8 494 aa10.02□□□□□ -0.81
NCKIPSD-202ENST00000413374 KNTC1P50748 2209 aa10.02□□□□□ -0.81
NCKIPSD-202ENST00000413374 CFAP47Q6ZTR5 3102 aa10.02□□□□□ -0.81
NCKIPSD-202ENST00000413374 ZZEF1O43149 2961 aa10.01□□□□□ -0.81
NCKIPSD-202ENST00000413374 KIR2DS5A0A0G2JLQ3 304 aa10.01□□□□□ -0.81
NCKIPSD-202ENST00000413374 A0A0G2JNG1 304 aa10.01□□□□□ -0.81
NCKIPSD-202ENST00000413374 EFCAB7A8K855 629 aa10.01□□□□□ -0.81
NCKIPSD-202ENST00000413374 C9orf172C9J069 976 aa10.01□□□□□ -0.81
NCKIPSD-202ENST00000413374 KIR2DS3K7RE56 304 aa10.01□□□□□ -0.81
NCKIPSD-202ENST00000413374 LIASO43766 372 aa10.01□□□□□ -0.81
NCKIPSD-202ENST00000413374 SRP72O76094 671 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms