RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 PPIGQ13427 754 aaKnown RBP eCLIP19.9■□□□□ 0.784e-7■■□□□ 13.9
USP39-204ENST00000409766 LRP8Q14114 963 aa19.9■□□□□ 0.78
USP39-204ENST00000409766 GRAMD4Q6IC98 578 aa19.9■□□□□ 0.78
USP39-204ENST00000409766 CRTC1Q6UUV9 634 aa19.9■□□□□ 0.78
USP39-204ENST00000409766 DDIASQ8IXT1 998 aa19.9■□□□□ 0.78
USP39-204ENST00000409766 SCRN2Q96FV2 425 aa19.9■□□□□ 0.78
USP39-204ENST00000409766 PLEKHG4BQ96PX9 1271 aa19.9■□□□□ 0.78
USP39-204ENST00000409766 C17orf80Q9BSJ5 609 aa19.9■□□□□ 0.78
USP39-204ENST00000409766 TDP1Q9NUW8 608 aa19.9■□□□□ 0.78
USP39-204ENST00000409766 CACNA2D2Q9NY47 1150 aa19.9■□□□□ 0.78
USP39-204ENST00000409766 GNPTGQ9UJJ9 305 aa19.9■□□□□ 0.78
USP39-204ENST00000409766 ZNF225Q9UK10 706 aa19.9■□□□□ 0.78
USP39-204ENST00000409766 PPIL1Q9Y3C6 166 aa19.9■□□□□ 0.78
USP39-204ENST00000409766 PDE4DIPQ5VU43 2346 aa19.9■□□□□ 0.78
USP39-204ENST00000409766 E2F3O00716 465 aa19.9■□□□□ 0.78
USP39-204ENST00000409766 ESRRBO95718 433 aa19.9■□□□□ 0.78
USP39-204ENST00000409766 PTPN2P17706 415 aa19.9■□□□□ 0.78
USP39-204ENST00000409766 GPX3P22352 226 aa19.9■□□□□ 0.78
USP39-204ENST00000409766 PRDX3P30048 256 aaKnown RBP19.9■□□□□ 0.78
USP39-204ENST00000409766 CTNNB1P35222 781 aa19.9■□□□□ 0.78
USP39-204ENST00000409766 SPAM1P38567 509 aa19.9■□□□□ 0.78
USP39-204ENST00000409766 CHRNA6Q15825 494 aa19.9■□□□□ 0.78
USP39-204ENST00000409766 GPR33Q49SQ1 333 aa19.9■□□□□ 0.78
USP39-204ENST00000409766 LYPLAL1Q5VWZ2 237 aa19.9■□□□□ 0.78
USP39-204ENST00000409766 TRIM68Q6AZZ1 485 aa19.9■□□□□ 0.78
USP39-204ENST00000409766 SYVN1Q86TM6 617 aa19.9■□□□□ 0.78
USP39-204ENST00000409766 KBTBD2Q8IY47 623 aa19.9■□□□□ 0.78
USP39-204ENST00000409766 CLDN19Q8N6F1 224 aa19.9■□□□□ 0.78
USP39-204ENST00000409766 SNX31Q8N9S9 440 aa19.9■□□□□ 0.78
USP39-204ENST00000409766 OR9I1Q8NGQ6 314 aa19.9■□□□□ 0.78
USP39-204ENST00000409766 NAT14Q8WUY8 206 aa19.9■□□□□ 0.78
USP39-204ENST00000409766 HGH1Q9BTY7 390 aa19.9■□□□□ 0.78
USP39-204ENST00000409766 SLC25A23Q9BV35 468 aa19.9■□□□□ 0.78
USP39-204ENST00000409766 CPEB1Q9BZB8 566 aaKnown RBP19.9■□□□□ 0.78
USP39-204ENST00000409766 SUV39H2Q9H5I1 410 aa19.9■□□□□ 0.78
USP39-204ENST00000409766 NUDT4Q9NZJ9 180 aa19.9■□□□□ 0.78
USP39-204ENST00000409766 SARDHQ9UL12 918 aa19.9■□□□□ 0.78
USP39-204ENST00000409766 ASB1Q9Y576 335 aa19.9■□□□□ 0.78
USP39-204ENST00000409766 PCDHGA7Q9Y5G6 932 aa19.9■□□□□ 0.78
USP39-204ENST00000409766 PRSS21Q9Y6M0 314 aa19.9■□□□□ 0.78
USP39-204ENST00000409766 CHD7Q9P2D1 2997 aa19.9■□□□□ 0.78
USP39-204ENST00000409766 NEDD8-MDP1E9PL57 170 aa19.89■□□□□ 0.77
USP39-204ENST00000409766 RHOP08100 348 aa19.89■□□□□ 0.77
USP39-204ENST00000409766 LINC00032P0C843 101 aa19.89■□□□□ 0.77
USP39-204ENST00000409766 XRCC1P18887 633 aaPredicted RBP19.89■□□□□ 0.77
USP39-204ENST00000409766 ECT2LQ008S8 904 aa19.89■□□□□ 0.77
USP39-204ENST00000409766 GRB7Q14451 532 aa19.89■□□□□ 0.77
USP39-204ENST00000409766 SLC5A9Q2M3M2 681 aa19.89■□□□□ 0.77
USP39-204ENST00000409766 REP15Q6BDI9 236 aa19.89■□□□□ 0.77
USP39-204ENST00000409766 PAOXQ6QHF9 649 aa19.89■□□□□ 0.77
USP39-204ENST00000409766 SBSNQ6UWP8 590 aa19.89■□□□□ 0.77
USP39-204ENST00000409766 TPRG1Q6ZUI0 275 aa19.89■□□□□ 0.77
USP39-204ENST00000409766 RTL10Q7L3V2 364 aa19.89■□□□□ 0.77
USP39-204ENST00000409766 DHDDSQ86SQ9 333 aa19.89■□□□□ 0.77
USP39-204ENST00000409766 FUNDC1Q8IVP5 155 aa19.89■□□□□ 0.77
USP39-204ENST00000409766 LKAAEAR1Q8TD35 194 aa19.89■□□□□ 0.77
USP39-204ENST00000409766 POF1BQ8WVV4 589 aa19.89■□□□□ 0.77
USP39-204ENST00000409766 BADQ92934 168 aa19.89■□□□□ 0.77
USP39-204ENST00000409766 ESAMQ96AP7 390 aa19.89■□□□□ 0.77
USP39-204ENST00000409766 TMEM106CQ9BVX2 250 aa19.89■□□□□ 0.77
USP39-204ENST00000409766 TLR9Q9NR96 1032 aa19.89■□□□□ 0.77
USP39-204ENST00000409766 GIMAP2Q9UG22 337 aa19.89■□□□□ 0.77
USP39-204ENST00000409766 POLG2Q9UHN1 485 aa19.89■□□□□ 0.77
USP39-204ENST00000409766 BTRCQ9Y297 605 aa19.89■□□□□ 0.77
USP39-204ENST00000409766 PIKFYVEQ9Y2I7 2098 aa19.89■□□□□ 0.77
USP39-204ENST00000409766 AGAP14A8MT82 685 aa19.88■□□□□ 0.77
USP39-204ENST00000409766 H3BNX3 289 aa19.88■□□□□ 0.77
USP39-204ENST00000409766 BNIP3LO60238 219 aa19.88■□□□□ 0.77
USP39-204ENST00000409766 ME2P23368 584 aa19.88■□□□□ 0.77
USP39-204ENST00000409766 CCNHP51946 323 aaPredicted RBP19.88■□□□□ 0.77
USP39-204ENST00000409766 PTPN5P54829 565 aa19.88■□□□□ 0.77
USP39-204ENST00000409766 STX1BP61266 288 aa19.88■□□□□ 0.77
USP39-204ENST00000409766 MMEL1Q495T6 779 aa19.88■□□□□ 0.77
USP39-204ENST00000409766 ADAMTSL2Q86TH1 951 aa19.88■□□□□ 0.77
USP39-204ENST00000409766 PCDH20Q8N6Y1 951 aaKnown RBP19.88■□□□□ 0.77
USP39-204ENST00000409766 GPR26Q8NDV2 337 aa19.88■□□□□ 0.77
USP39-204ENST00000409766 SPPL3Q8TCT6 385 aa19.88■□□□□ 0.77
USP39-204ENST00000409766 IRF7Q92985 503 aa19.88■□□□□ 0.77
USP39-204ENST00000409766 ZNF184Q99676 751 aaPredicted RBP19.88■□□□□ 0.77
USP39-204ENST00000409766 BBS2Q9BXC9 721 aa19.88■□□□□ 0.77
USP39-204ENST00000409766 NUSAP1Q9BXS6 441 aaKnown RBP19.88■□□□□ 0.77
USP39-204ENST00000409766 CEP44Q9C0F1 390 aa19.88■□□□□ 0.77
USP39-204ENST00000409766 EIF2B4Q9UI10 523 aaKnown RBP19.88■□□□□ 0.77
USP39-204ENST00000409766 SLCO3A1Q9UIG8 710 aa19.88■□□□□ 0.77
USP39-204ENST00000409766 SLC25A13Q9UJS0 675 aa19.88■□□□□ 0.77
USP39-204ENST00000409766 TIMM22Q9Y584 194 aa19.88■□□□□ 0.77
USP39-204ENST00000409766 SLC4A7Q9Y6M7 1214 aa19.88■□□□□ 0.77
USP39-204ENST00000409766 CHRM1P11229 460 aaPredicted RBP19.88■□□□□ 0.77
USP39-204ENST00000409766 PABPC1P11940 636 aaKnown RBP19.88■□□□□ 0.77
USP39-204ENST00000409766 PSMD8P48556 350 aa19.88■□□□□ 0.77
USP39-204ENST00000409766 PSME3P61289 254 aa19.88■□□□□ 0.77
USP39-204ENST00000409766 SEMG2Q02383 582 aa19.88■□□□□ 0.77
USP39-204ENST00000409766 FPGSQ05932 587 aa19.88■□□□□ 0.77
USP39-204ENST00000409766 CDC16Q13042 620 aa19.88■□□□□ 0.77
USP39-204ENST00000409766 ARHGAP15Q53QZ3 475 aa19.88■□□□□ 0.77
USP39-204ENST00000409766 CARD16Q5EG05 197 aa19.88■□□□□ 0.77
USP39-204ENST00000409766 TMEM240Q5SV17 173 aa19.88■□□□□ 0.77
USP39-204ENST00000409766 MACC1Q6ZN28 852 aa19.88■□□□□ 0.77
USP39-204ENST00000409766 DPY19L3Q6ZPD9 716 aa19.88■□□□□ 0.77
USP39-204ENST00000409766 RNF148Q8N7C7 305 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms