RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 TTC25Q96NG3 672 aa14.53□□□□□ -0.08
CBX3-203ENST00000409747 EFHD1Q9BUP0 239 aa14.53□□□□□ -0.08
CBX3-203ENST00000409747 FAM117AQ9C073 453 aa14.53□□□□□ -0.08
CBX3-203ENST00000409747 POT1Q9NUX5 634 aa14.53□□□□□ -0.08
CBX3-203ENST00000409747 UBP1Q9NZI7 540 aa14.53□□□□□ -0.08
CBX3-203ENST00000409747 SAE1Q9UBE0 346 aaPredicted RBP14.53□□□□□ -0.08
CBX3-203ENST00000409747 SPO11Q9Y5K1 396 aa14.53□□□□□ -0.08
CBX3-203ENST00000409747 HEMK1Q9Y5R4 338 aaPredicted RBP14.53□□□□□ -0.08
CBX3-203ENST00000409747 MN1Q10571 1320 aaPredicted RBP14.53□□□□□ -0.08
CBX3-203ENST00000409747 LOC285095A0A1B0GVY8 99 aa14.52□□□□□ -0.08
CBX3-203ENST00000409747 WT1P19544 449 aaPredicted RBP14.52□□□□□ -0.08
CBX3-203ENST00000409747 NFKB1P19838 968 aa14.52□□□□□ -0.08
CBX3-203ENST00000409747 WNT3AP56704 352 aa14.52□□□□□ -0.08
CBX3-203ENST00000409747 WASHC5Q12768 1159 aa14.52□□□□□ -0.08
CBX3-203ENST00000409747 SPA17Q15506 151 aa14.52□□□□□ -0.08
CBX3-203ENST00000409747 C11orf63Q6NUN7 778 aa14.52□□□□□ -0.08
CBX3-203ENST00000409747 TMEM26Q6ZUK4 368 aa14.52□□□□□ -0.08
CBX3-203ENST00000409747 CCDC170Q8IYT3 715 aa14.52□□□□□ -0.08
CBX3-203ENST00000409747 RCOR2Q8IZ40 523 aa14.52□□□□□ -0.08
CBX3-203ENST00000409747 EXD3Q8N9H8 876 aa14.52□□□□□ -0.08
CBX3-203ENST00000409747 GDAP1Q8TB36 358 aa14.52□□□□□ -0.08
CBX3-203ENST00000409747 RTP4Q96DX8 246 aa14.52□□□□□ -0.08
CBX3-203ENST00000409747 QKIQ96PU8 341 aaKnown RBP eCLIP14.52□□□□□ -0.08
CBX3-203ENST00000409747 FCRL5Q96RD9 977 aa14.52□□□□□ -0.08
CBX3-203ENST00000409747 FERMT1Q9BQL6 677 aa14.52□□□□□ -0.08
CBX3-203ENST00000409747 TBC1D10AQ9BXI6 508 aa14.52□□□□□ -0.08
CBX3-203ENST00000409747 TRIT1Q9H3H1 467 aaKnown RBP14.52□□□□□ -0.08
CBX3-203ENST00000409747 TENM4Q6N022 2769 aa14.52□□□□□ -0.09
CBX3-203ENST00000409747 hCG_1818297A0A087WSY0 165 aa14.52□□□□□ -0.09
CBX3-203ENST00000409747 TOX3O15405 576 aaPredicted RBP14.52□□□□□ -0.09
CBX3-203ENST00000409747 KCNJ13O60928 360 aa14.52□□□□□ -0.09
CBX3-203ENST00000409747 PPFIA2O75334 1257 aa14.52□□□□□ -0.09
CBX3-203ENST00000409747 UBXN7O94888 489 aa14.52□□□□□ -0.09
CBX3-203ENST00000409747 LCA5LO95447 670 aa14.52□□□□□ -0.09
CBX3-203ENST00000409747 LIFP15018 202 aa14.52□□□□□ -0.09
CBX3-203ENST00000409747 HLA-DPA1P20036 260 aa14.52□□□□□ -0.09
CBX3-203ENST00000409747 IDSP22304 550 aa14.52□□□□□ -0.09
CBX3-203ENST00000409747 MAP4P27816 1152 aaKnown RBP14.52□□□□□ -0.09
CBX3-203ENST00000409747 CD68P34810 354 aaPredicted RBP14.52□□□□□ -0.09
CBX3-203ENST00000409747 SPAM1P38567 509 aa14.52□□□□□ -0.09
CBX3-203ENST00000409747 NFATC3Q12968 1075 aa14.52□□□□□ -0.09
CBX3-203ENST00000409747 MPP3Q13368 585 aa14.52□□□□□ -0.09
CBX3-203ENST00000409747 TBR1Q16650 682 aa14.52□□□□□ -0.09
CBX3-203ENST00000409747 AGAP9Q5VTM2 703 aa14.52□□□□□ -0.09
CBX3-203ENST00000409747 SARM1Q6SZW1 724 aa14.52□□□□□ -0.09
CBX3-203ENST00000409747 KDELC1Q6UW63 502 aa14.52□□□□□ -0.09
CBX3-203ENST00000409747 ABRAXAS1Q6UWZ7 409 aa14.52□□□□□ -0.09
CBX3-203ENST00000409747 WASH2PQ6VEQ5 465 aa14.52□□□□□ -0.09
CBX3-203ENST00000409747 PID1Q7Z2X4 250 aa14.52□□□□□ -0.09
CBX3-203ENST00000409747 GLT6D1Q7Z4J2 308 aa14.52□□□□□ -0.09
CBX3-203ENST00000409747 ZC3H18Q86VM9 953 aaKnown RBP14.52□□□□□ -0.09
CBX3-203ENST00000409747 TRAPPC5Q8IUR0 188 aa14.52□□□□□ -0.09
CBX3-203ENST00000409747 NLGN4XQ8N0W4 816 aa14.52□□□□□ -0.09
CBX3-203ENST00000409747 NLGN4YQ8NFZ3 816 aaPredicted RBP14.52□□□□□ -0.09
CBX3-203ENST00000409747 HTR3CQ8WXA8 447 aa14.52□□□□□ -0.09
CBX3-203ENST00000409747 FSD1LQ9BXM9 530 aa14.52□□□□□ -0.09
CBX3-203ENST00000409747 BPIFA1Q9NP55 256 aa14.52□□□□□ -0.09
CBX3-203ENST00000409747 WASH6PQ9NQA3 447 aa14.52□□□□□ -0.09
CBX3-203ENST00000409747 SLC23A2Q9UGH3 650 aa14.52□□□□□ -0.09
CBX3-203ENST00000409747 KLHL3Q9UH77 587 aa14.52□□□□□ -0.09
CBX3-203ENST00000409747 PILRAQ9UKJ1 303 aa14.52□□□□□ -0.09
CBX3-203ENST00000409747 TRHDEQ9UKU6 1024 aa14.52□□□□□ -0.09
CBX3-203ENST00000409747 DNAJC16Q9Y2G8 782 aa14.52□□□□□ -0.09
CBX3-203ENST00000409747 ZNF891A8MT65 544 aaPredicted RBP14.51□□□□□ -0.09
CBX3-203ENST00000409747 AURKAO14965 403 aa14.51□□□□□ -0.09
CBX3-203ENST00000409747 SLC28A2O43868 658 aa14.51□□□□□ -0.09
CBX3-203ENST00000409747 MTX2O75431 263 aa14.51□□□□□ -0.09
CBX3-203ENST00000409747 C9P02748 559 aa14.51□□□□□ -0.09
CBX3-203ENST00000409747 AMD1P17707 334 aa14.51□□□□□ -0.09
CBX3-203ENST00000409747 CYLC1P35663 651 aaPredicted RBP14.51□□□□□ -0.09
CBX3-203ENST00000409747 HALP42357 657 aa14.51□□□□□ -0.09
CBX3-203ENST00000409747 TMEM115Q12893 351 aaPredicted RBP14.51□□□□□ -0.09
CBX3-203ENST00000409747 ITGA9Q13797 1035 aa14.51□□□□□ -0.09
CBX3-203ENST00000409747 SEPT7Q16181 437 aaKnown RBP14.51□□□□□ -0.09
CBX3-203ENST00000409747 PPP2R5EQ16537 467 aa14.51□□□□□ -0.09
CBX3-203ENST00000409747 ATP13A5Q4VNC0 1218 aa14.51□□□□□ -0.09
CBX3-203ENST00000409747 SIRPB2Q5JXA9 342 aa14.51□□□□□ -0.09
CBX3-203ENST00000409747 LDLRAP1Q5SW96 308 aa14.51□□□□□ -0.09
CBX3-203ENST00000409747 FAM182AQ5T1J6 154 aa14.51□□□□□ -0.09
CBX3-203ENST00000409747 ZNF547Q8IVP9 402 aa14.51□□□□□ -0.09
CBX3-203ENST00000409747 ZNF567Q8N184 647 aa14.51□□□□□ -0.09
CBX3-203ENST00000409747 CXorf40BQ96DE9 158 aa14.51□□□□□ -0.09
CBX3-203ENST00000409747 CALR3Q96L12 384 aaKnown RBP14.51□□□□□ -0.09
CBX3-203ENST00000409747 CATSPER2Q96P56 530 aa14.51□□□□□ -0.09
CBX3-203ENST00000409747 SLC12A9Q9BXP2 914 aa14.51□□□□□ -0.09
CBX3-203ENST00000409747 TRIM5Q9C035 493 aa14.51□□□□□ -0.09
CBX3-203ENST00000409747 SCHIP1Q9P0W5 487 aaPredicted RBP14.51□□□□□ -0.09
CBX3-203ENST00000409747 RSPH14Q9UHP6 348 aa14.51□□□□□ -0.09
CBX3-203ENST00000409747 PKP3Q9Y446 797 aa14.51□□□□□ -0.09
CBX3-203ENST00000409747 PRR19A6NJB7 356 aa14.5□□□□□ -0.09
CBX3-203ENST00000409747 POLR1CO15160 346 aaPredicted RBP14.5□□□□□ -0.09
CBX3-203ENST00000409747 FAM87AP0C7U9 286 aa14.5□□□□□ -0.09
CBX3-203ENST00000409747 SLC19A1P41440 591 aa14.5□□□□□ -0.09
CBX3-203ENST00000409747 CYP4F2P78329 520 aa14.5□□□□□ -0.09
CBX3-203ENST00000409747 XRCC4Q13426 336 aa14.5□□□□□ -0.09
CBX3-203ENST00000409747 LLGL1Q15334 1064 aa14.5□□□□□ -0.09
CBX3-203ENST00000409747 SLC1A5Q15758 541 aa14.5□□□□□ -0.09
CBX3-203ENST00000409747 BORAQ6PGQ7 559 aa14.5□□□□□ -0.09
CBX3-203ENST00000409747 PRICKLE2Q7Z3G6 844 aa14.5□□□□□ -0.09
CBX3-203ENST00000409747 TTC30BQ8N4P2 665 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms