RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 TMEM11P17152 192 aa3.9□□□□□ -1.79
PMS1-203ENST00000409593 MCCP23508 829 aa3.9□□□□□ -1.79
PMS1-203ENST00000409593 TIMP3P35625 211 aa3.9□□□□□ -1.79
PMS1-203ENST00000409593 CDKN1AP38936 164 aa3.9□□□□□ -1.79
PMS1-203ENST00000409593 GLIPR1P48060 266 aa3.9□□□□□ -1.79
PMS1-203ENST00000409593 ARCN1P48444 511 aaKnown RBP3.9□□□□□ -1.79
PMS1-203ENST00000409593 CD81P60033 236 aa3.9□□□□□ -1.79
PMS1-203ENST00000409593 EIF4A2Q14240 407 aaKnown RBP3.9□□□□□ -1.79
PMS1-203ENST00000409593 MRGPRG-AS1Q2M3A8 158 aa3.9□□□□□ -1.79
PMS1-203ENST00000409593 DGLUCYQ7Z3D6 616 aa3.9□□□□□ -1.79
PMS1-203ENST00000409593 PIWIL4Q7Z3Z4 852 aaKnown RBP3.9□□□□□ -1.79
PMS1-203ENST00000409593 CTAGE4Q8IX94 777 aa3.9□□□□□ -1.79
PMS1-203ENST00000409593 GBGT1Q8N5D6 347 aa3.9□□□□□ -1.79
PMS1-203ENST00000409593 SLC5A8Q8N695 610 aa3.9□□□□□ -1.79
PMS1-203ENST00000409593 CNBD1Q8NA66 436 aa3.9□□□□□ -1.79
PMS1-203ENST00000409593 OR10V1Q8NGI7 309 aa3.9□□□□□ -1.79
PMS1-203ENST00000409593 GSDMBQ8TAX9 411 aa3.9□□□□□ -1.79
PMS1-203ENST00000409593 MPP4Q96JB8 637 aa3.9□□□□□ -1.79
PMS1-203ENST00000409593 NUDCD1Q96RS6 583 aa3.9□□□□□ -1.79
PMS1-203ENST00000409593 NCAPGQ9BPX3 1015 aa3.9□□□□□ -1.79
PMS1-203ENST00000409593 TMEM39BQ9GZU3 492 aa3.9□□□□□ -1.79
PMS1-203ENST00000409593 MUC13Q9H3R2 512 aa3.9□□□□□ -1.79
PMS1-203ENST00000409593 KAT14Q9H8E8 782 aa3.9□□□□□ -1.79
PMS1-203ENST00000409593 JRKLQ9Y4A0 524 aa3.9□□□□□ -1.79
PMS1-203ENST00000409593 SMCHD1A6NHR9 2005 aa3.89□□□□□ -1.79
PMS1-203ENST00000409593 ANKRD66B4E2M5 251 aa3.89□□□□□ -1.79
PMS1-203ENST00000409593 OGG1O15527 345 aa3.89□□□□□ -1.79
PMS1-203ENST00000409593 ZBTB43O43298 467 aa3.89□□□□□ -1.79
PMS1-203ENST00000409593 BUD23O43709 281 aaKnown RBP3.89□□□□□ -1.79
PMS1-203ENST00000409593 ZG16O60844 167 aa3.89□□□□□ -1.79
PMS1-203ENST00000409593 CTSVO60911 334 aa3.89□□□□□ -1.79
PMS1-203ENST00000409593 GPC4O75487 556 aa3.89□□□□□ -1.79
PMS1-203ENST00000409593 HIST1H2ABP04908 130 aa3.89□□□□□ -1.79
PMS1-203ENST00000409593 RARGP13631 454 aa3.89□□□□□ -1.79
PMS1-203ENST00000409593 CDH2P19022 906 aaPredicted RBP3.89□□□□□ -1.79
PMS1-203ENST00000409593 NR1D1P20393 614 aa3.89□□□□□ -1.79
PMS1-203ENST00000409593 HIST1H2ADP20671 130 aa3.89□□□□□ -1.79
PMS1-203ENST00000409593 MSH2P43246 934 aa3.89□□□□□ -1.79
PMS1-203ENST00000409593 SETQ01105 290 aaPredicted RBP3.89□□□□□ -1.79
PMS1-203ENST00000409593 SOWAHCQ53LP3 525 aaPredicted RBP3.89□□□□□ -1.79
PMS1-203ENST00000409593 CCNYL2Q5T2Q4 361 aa3.89□□□□□ -1.79
PMS1-203ENST00000409593 CEACAM20Q6UY09 585 aa3.89□□□□□ -1.79
PMS1-203ENST00000409593 IKBIPQ70UQ0 350 aa3.89□□□□□ -1.79
PMS1-203ENST00000409593 HIST3H2AQ7L7L0 130 aa3.89□□□□□ -1.79
PMS1-203ENST00000409593 LONP2Q86WA8 852 aa3.89□□□□□ -1.79
PMS1-203ENST00000409593 C1orf52Q8N6N3 182 aaKnown RBP3.89□□□□□ -1.79
PMS1-203ENST00000409593 HJURPQ8NCD3 748 aaPredicted RBP3.89□□□□□ -1.79
PMS1-203ENST00000409593 TM9SF4Q92544 642 aa3.89□□□□□ -1.79
PMS1-203ENST00000409593 ZNF501Q96CX3 271 aaPredicted RBP3.89□□□□□ -1.79
PMS1-203ENST00000409593 SCRN2Q96FV2 425 aa3.89□□□□□ -1.79
PMS1-203ENST00000409593 ABHD8Q96I13 439 aa3.89□□□□□ -1.79
PMS1-203ENST00000409593 DUX3Q96PT4 197 aa3.89□□□□□ -1.79
PMS1-203ENST00000409593 GAD1Q99259 594 aa3.89□□□□□ -1.79
PMS1-203ENST00000409593 SETD4Q9NVD3 440 aa3.89□□□□□ -1.79
PMS1-203ENST00000409593 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.89□□□□□ -1.79
PMS1-203ENST00000409593 PMS2P5A8MQ11 134 aa3.88□□□□□ -1.79
PMS1-203ENST00000409593 SCAMP1O15126 338 aa3.88□□□□□ -1.79
PMS1-203ENST00000409593 PDE9AO76083 593 aa3.88□□□□□ -1.79
PMS1-203ENST00000409593 DDX58O95786 925 aaKnown RBP3.88□□□□□ -1.79
PMS1-203ENST00000409593 AMBPP02760 352 aa3.88□□□□□ -1.79
PMS1-203ENST00000409593 GM2AP17900 193 aa3.88□□□□□ -1.79
PMS1-203ENST00000409593 GPR143P51810 404 aa3.88□□□□□ -1.79
PMS1-203ENST00000409593 CRIP2P52943 208 aaPredicted RBP3.88□□□□□ -1.79
PMS1-203ENST00000409593 MBTD1Q05BQ5 628 aa3.88□□□□□ -1.79
PMS1-203ENST00000409593 ASPRV1Q53RT3 343 aa3.88□□□□□ -1.79
PMS1-203ENST00000409593 SNX30Q5VWJ9 437 aa3.88□□□□□ -1.79
PMS1-203ENST00000409593 ADAM5Q6NVV9 412 aa3.88□□□□□ -1.79
PMS1-203ENST00000409593 TMEM154Q6P9G4 183 aa3.88□□□□□ -1.79
PMS1-203ENST00000409593 KLHL35Q6PF15 583 aa3.88□□□□□ -1.79
PMS1-203ENST00000409593 SARM1Q6SZW1 724 aa3.88□□□□□ -1.79
PMS1-203ENST00000409593 Q75L30 129 aa3.88□□□□□ -1.79
PMS1-203ENST00000409593 MAATS1Q7Z4T9 603 aa3.88□□□□□ -1.79
PMS1-203ENST00000409593 TEX11Q8IYF3 940 aa3.88□□□□□ -1.79
PMS1-203ENST00000409593 HACE1Q8IYU2 909 aa3.88□□□□□ -1.79
PMS1-203ENST00000409593 TDRD9Q8NDG6 1382 aaKnown RBP3.88□□□□□ -1.79
PMS1-203ENST00000409593 KLHDC9Q8NEP7 349 aa3.88□□□□□ -1.79
PMS1-203ENST00000409593 RDM1Q8NG50 284 aa3.88□□□□□ -1.79
PMS1-203ENST00000409593 HDAC2Q92769 488 aaKnown RBP3.88□□□□□ -1.79
PMS1-203ENST00000409593 CMTM3Q96MX0 182 aa3.88□□□□□ -1.79
PMS1-203ENST00000409593 ITPAQ9BY32 194 aa3.88□□□□□ -1.79
PMS1-203ENST00000409593 DBNLQ9UJU6 430 aaKnown RBP3.88□□□□□ -1.79
PMS1-203ENST00000409593 SMAD9O15198 467 aaKnown RBP3.87□□□□□ -1.79
PMS1-203ENST00000409593 HS6ST1O60243 411 aa3.87□□□□□ -1.79
PMS1-203ENST00000409593 CIDEAO60543 219 aa3.87□□□□□ -1.79
PMS1-203ENST00000409593 BMP10O95393 424 aa3.87□□□□□ -1.79
PMS1-203ENST00000409593 BAG4O95429 457 aaKnown RBP3.87□□□□□ -1.79
PMS1-203ENST00000409593 SCGB1D1O95968 90 aa3.87□□□□□ -1.79
PMS1-203ENST00000409593 PAK4O96013 591 aaPredicted RBP3.87□□□□□ -1.79
PMS1-203ENST00000409593 LAMP2P13473 410 aa3.87□□□□□ -1.79
PMS1-203ENST00000409593 PAX1P15863 534 aa3.87□□□□□ -1.79
PMS1-203ENST00000409593 TNFAIP3P21580 790 aa3.87□□□□□ -1.79
PMS1-203ENST00000409593 HRH2P25021 359 aa3.87□□□□□ -1.79
PMS1-203ENST00000409593 CTSCP53634 463 aa3.87□□□□□ -1.79
PMS1-203ENST00000409593 MAMLD1Q13495 774 aa3.87□□□□□ -1.79
PMS1-203ENST00000409593 ASTE1Q2TB18 679 aaPredicted RBP3.87□□□□□ -1.79
PMS1-203ENST00000409593 WDR38Q5JTN6 314 aa3.87□□□□□ -1.79
PMS1-203ENST00000409593 CEP85LQ5SZL2 805 aa3.87□□□□□ -1.79
PMS1-203ENST00000409593 SFMBT2Q5VUG0 894 aa3.87□□□□□ -1.79
PMS1-203ENST00000409593 TMEM198Q66K66 360 aa3.87□□□□□ -1.79
PMS1-203ENST00000409593 SLC35E4Q6ICL7 350 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms