RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 PPCSQ9HAB8 311 aa12.65□□□□□ -0.38
CHRNA1-205ENST00000409542 SPATS2LQ9NUQ6 558 aaKnown RBP12.65□□□□□ -0.38
CHRNA1-205ENST00000409542 TMEM51Q9NW97 253 aa12.65□□□□□ -0.38
CHRNA1-205ENST00000409542 PCDHB11Q9Y5F2 797 aa12.65□□□□□ -0.38
CHRNA1-205ENST00000409542 TEX15Q9BXT5 2789 aa12.65□□□□□ -0.38
CHRNA1-205ENST00000409542 SPENQ96T58 3664 aaKnown RBP12.65□□□□□ -0.38
CHRNA1-205ENST00000409542 C2CD4BA6NLJ0 364 aa12.65□□□□□ -0.38
CHRNA1-205ENST00000409542 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.65□□□□□ -0.38
CHRNA1-205ENST00000409542 RASA4BC9J798 803 aa12.65□□□□□ -0.38
CHRNA1-205ENST00000409542 ANKRD65E5RJM6 399 aa12.65□□□□□ -0.38
CHRNA1-205ENST00000409542 RASA4O43374 803 aa12.65□□□□□ -0.38
CHRNA1-205ENST00000409542 CDH16O75309 829 aa12.65□□□□□ -0.38
CHRNA1-205ENST00000409542 KDELR1P24390 212 aa12.65□□□□□ -0.38
CHRNA1-205ENST00000409542 PCK1P35558 622 aa12.65□□□□□ -0.38
CHRNA1-205ENST00000409542 MMP12P39900 470 aa12.65□□□□□ -0.38
CHRNA1-205ENST00000409542 RGRP47804 291 aa12.65□□□□□ -0.38
CHRNA1-205ENST00000409542 ELP6Q0PNE2 266 aa12.65□□□□□ -0.38
CHRNA1-205ENST00000409542 RALGDSQ12967 914 aa12.65□□□□□ -0.38
CHRNA1-205ENST00000409542 MTM1Q13496 603 aa12.65□□□□□ -0.38
CHRNA1-205ENST00000409542 ARHGEF7Q14155 803 aa12.65□□□□□ -0.38
CHRNA1-205ENST00000409542 RNASEH2BQ5TBB1 312 aaKnown RBP12.65□□□□□ -0.38
CHRNA1-205ENST00000409542 PCGF5Q86SE9 256 aa12.65□□□□□ -0.38
CHRNA1-205ENST00000409542 NRROSQ86YC3 692 aa12.65□□□□□ -0.38
CHRNA1-205ENST00000409542 TDRPQ86YL5 185 aa12.65□□□□□ -0.38
CHRNA1-205ENST00000409542 CAMK1DQ8IU85 385 aa12.65□□□□□ -0.38
CHRNA1-205ENST00000409542 RTL3Q8N8U3 475 aaKnown RBP12.65□□□□□ -0.38
CHRNA1-205ENST00000409542 PTCD2Q8WV60 388 aaKnown RBP12.65□□□□□ -0.38
CHRNA1-205ENST00000409542 CENPIQ92674 756 aaPredicted RBP12.65□□□□□ -0.38
CHRNA1-205ENST00000409542 NSMCE3Q96MG7 304 aa12.65□□□□□ -0.38
CHRNA1-205ENST00000409542 NSRP1Q9H0G5 558 aaKnown RBP12.65□□□□□ -0.38
CHRNA1-205ENST00000409542 DPEP2Q9H4A9 486 aa12.65□□□□□ -0.38
CHRNA1-205ENST00000409542 RETREG1Q9H6L5 497 aa12.65□□□□□ -0.38
CHRNA1-205ENST00000409542 NBASA2RRP1 2371 aa12.64□□□□□ -0.39
CHRNA1-205ENST00000409542 IGHV5-10-1A0A0J9YXX1 117 aa12.64□□□□□ -0.39
CHRNA1-205ENST00000409542 J3KR12 359 aa12.64□□□□□ -0.39
CHRNA1-205ENST00000409542 SMAPO00193 183 aa12.64□□□□□ -0.39
CHRNA1-205ENST00000409542 NUDT21O43809 227 aaKnown RBP12.64□□□□□ -0.39
CHRNA1-205ENST00000409542 RECQL5O94762 991 aaPredicted RBP12.64□□□□□ -0.39
CHRNA1-205ENST00000409542 FUCA1P04066 466 aa12.64□□□□□ -0.39
CHRNA1-205ENST00000409542 LIFP15018 202 aa12.64□□□□□ -0.39
CHRNA1-205ENST00000409542 CD82P27701 267 aa12.64□□□□□ -0.39
CHRNA1-205ENST00000409542 IL1R2P27930 398 aa12.64□□□□□ -0.39
CHRNA1-205ENST00000409542 KIAA1024LP59773 190 aa12.64□□□□□ -0.39
CHRNA1-205ENST00000409542 GPS1Q13098 491 aa12.64□□□□□ -0.39
CHRNA1-205ENST00000409542 KCNAB2Q13303 367 aa12.64□□□□□ -0.39
CHRNA1-205ENST00000409542 SERINC3Q13530 473 aa12.64□□□□□ -0.39
CHRNA1-205ENST00000409542 CCDC121Q6ZUS5 278 aa12.64□□□□□ -0.39
CHRNA1-205ENST00000409542 HCAR2Q8TDS4 363 aa12.64□□□□□ -0.39
CHRNA1-205ENST00000409542 FAM172AQ8WUF8 416 aa12.64□□□□□ -0.39
CHRNA1-205ENST00000409542 PATE1Q8WXA2 126 aa12.64□□□□□ -0.39
CHRNA1-205ENST00000409542 NCAPGQ9BPX3 1015 aa12.64□□□□□ -0.39
CHRNA1-205ENST00000409542 SUDS3Q9H7L9 328 aaPredicted RBP12.64□□□□□ -0.39
CHRNA1-205ENST00000409542 ACTR5Q9H9F9 607 aaPredicted RBP12.64□□□□□ -0.39
CHRNA1-205ENST00000409542 CYP4F12Q9HCS2 524 aa12.64□□□□□ -0.39
CHRNA1-205ENST00000409542 EURLQ9NYK6 297 aa12.64□□□□□ -0.39
CHRNA1-205ENST00000409542 ST14Q9Y5Y6 855 aa12.64□□□□□ -0.39
CHRNA1-205ENST00000409542 CLEC18AA5D8T8 446 aa12.63□□□□□ -0.39
CHRNA1-205ENST00000409542 A8MX80 341 aa12.63□□□□□ -0.39
CHRNA1-205ENST00000409542 STMND1H3BQB6 276 aa12.63□□□□□ -0.39
CHRNA1-205ENST00000409542 RNF8O76064 485 aa12.63□□□□□ -0.39
CHRNA1-205ENST00000409542 FGF1P05230 155 aa12.63□□□□□ -0.39
CHRNA1-205ENST00000409542 PECAM1P16284 738 aaPredicted RBP12.63□□□□□ -0.39
CHRNA1-205ENST00000409542 CD1CP29017 333 aa12.63□□□□□ -0.39
CHRNA1-205ENST00000409542 ALDH4A1P30038 563 aa12.63□□□□□ -0.39
CHRNA1-205ENST00000409542 SDC4P31431 198 aa12.63□□□□□ -0.39
CHRNA1-205ENST00000409542 TRIM23P36406 574 aa12.63□□□□□ -0.39
CHRNA1-205ENST00000409542 PTPN9P43378 593 aa12.63□□□□□ -0.39
CHRNA1-205ENST00000409542 SUOXP51687 545 aa12.63□□□□□ -0.39
CHRNA1-205ENST00000409542 ZNF143P52747 638 aaPredicted RBP12.63□□□□□ -0.39
CHRNA1-205ENST00000409542 POLE2P56282 527 aa12.63□□□□□ -0.39
CHRNA1-205ENST00000409542 FOXK1P85037 733 aa12.63□□□□□ -0.39
CHRNA1-205ENST00000409542 IFT88Q13099 833 aa12.63□□□□□ -0.39
CHRNA1-205ENST00000409542 ITIH4Q14624 930 aa12.63□□□□□ -0.39
CHRNA1-205ENST00000409542 RASA2Q15283 850 aa12.63□□□□□ -0.39
CHRNA1-205ENST00000409542 NKAIN2Q5VXU1 208 aa12.63□□□□□ -0.39
CHRNA1-205ENST00000409542 BORAQ6PGQ7 559 aa12.63□□□□□ -0.39
CHRNA1-205ENST00000409542 CLEC18BQ6UXF7 455 aa12.63□□□□□ -0.39
CHRNA1-205ENST00000409542 LIPIQ6XZB0 460 aa12.63□□□□□ -0.39
CHRNA1-205ENST00000409542 STRADAQ7RTN6 431 aa12.63□□□□□ -0.39
CHRNA1-205ENST00000409542 PIGWQ7Z7B1 504 aa12.63□□□□□ -0.39
CHRNA1-205ENST00000409542 PRUNE1Q86TP1 453 aa12.63□□□□□ -0.39
CHRNA1-205ENST00000409542 PIM3Q86V86 326 aa12.63□□□□□ -0.39
CHRNA1-205ENST00000409542 C17orf82Q86X59 251 aaPredicted RBP12.63□□□□□ -0.39
CHRNA1-205ENST00000409542 GLIS1Q8NBF1 620 aa12.63□□□□□ -0.39
CHRNA1-205ENST00000409542 CLEC18CQ8NCF0 446 aa12.63□□□□□ -0.39
CHRNA1-205ENST00000409542 CABS1Q96KC9 395 aa12.63□□□□□ -0.39
CHRNA1-205ENST00000409542 CCDC74BQ96LY2 380 aa12.63□□□□□ -0.39
CHRNA1-205ENST00000409542 PWWP2AQ96N64 755 aa12.63□□□□□ -0.39
CHRNA1-205ENST00000409542 TAAR9Q96RI9 348 aa12.63□□□□□ -0.39
CHRNA1-205ENST00000409542 CNPY3Q9BT09 278 aa12.63□□□□□ -0.39
CHRNA1-205ENST00000409542 ADNPQ9H2P0 1102 aa12.63□□□□□ -0.39
CHRNA1-205ENST00000409542 ZWILCHQ9H900 591 aa12.63□□□□□ -0.39
CHRNA1-205ENST00000409542 PDFQ9HBH1 243 aa12.63□□□□□ -0.39
CHRNA1-205ENST00000409542 SAYSD1Q9NPB0 183 aa12.63□□□□□ -0.39
CHRNA1-205ENST00000409542 TMEM9Q9P0T7 183 aa12.63□□□□□ -0.39
CHRNA1-205ENST00000409542 MOSPD1Q9UJG1 213 aa12.63□□□□□ -0.39
CHRNA1-205ENST00000409542 B3GALT1Q9Y5Z6 326 aa12.63□□□□□ -0.39
CHRNA1-205ENST00000409542 LRRK2Q5S007 2527 aa12.63□□□□□ -0.39
CHRNA1-205ENST00000409542 TMEM120BA0PK00 339 aa12.62□□□□□ -0.39
CHRNA1-205ENST00000409542 APOC4-APOC2K7ER74 178 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms