RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 MIPEPQ99797 713 aa6.21□□□□□ -1.42
GTF3C3-202ENST00000409364 C1QTNF3Q9BXJ4 246 aa6.21□□□□□ -1.42
GTF3C3-202ENST00000409364 OSBPL1AQ9BXW6 950 aa6.21□□□□□ -1.42
GTF3C3-202ENST00000409364 SHCBP1LQ9BZQ2 653 aa6.21□□□□□ -1.42
GTF3C3-202ENST00000409364 CIPCQ9C0C6 399 aa6.21□□□□□ -1.42
GTF3C3-202ENST00000409364 GSTO2Q9H4Y5 243 aa6.21□□□□□ -1.42
GTF3C3-202ENST00000409364 SFXN1Q9H9B4 322 aa6.21□□□□□ -1.42
GTF3C3-202ENST00000409364 MEAF6Q9HAF1 191 aa6.21□□□□□ -1.42
GTF3C3-202ENST00000409364 ACSS2Q9NR19 701 aa6.21□□□□□ -1.42
GTF3C3-202ENST00000409364 LATS2Q9NRM7 1088 aa6.21□□□□□ -1.42
GTF3C3-202ENST00000409364 SPATS2LQ9NUQ6 558 aaKnown RBP6.21□□□□□ -1.42
GTF3C3-202ENST00000409364 THG1LQ9NWX6 298 aaKnown RBP6.21□□□□□ -1.42
GTF3C3-202ENST00000409364 OBP2AQ9NY56 170 aa6.21□□□□□ -1.42
GTF3C3-202ENST00000409364 GDE1Q9NZC3 331 aa6.21□□□□□ -1.42
GTF3C3-202ENST00000409364 CRLS1Q9UJA2 301 aa6.21□□□□□ -1.42
GTF3C3-202ENST00000409364 TNPO3Q9Y5L0 923 aaKnown RBP6.21□□□□□ -1.42
GTF3C3-202ENST00000409364 ANAPC1Q9H1A4 1944 aa6.21□□□□□ -1.42
GTF3C3-202ENST00000409364 LOC100653049A0A140TA62 436 aa6.2□□□□□ -1.42
GTF3C3-202ENST00000409364 NPIPB15A6NHN6 443 aaPredicted RBP6.2□□□□□ -1.42
GTF3C3-202ENST00000409364 SUPT3HB4E1H0 165 aa6.2□□□□□ -1.42
GTF3C3-202ENST00000409364 UBXN8O00124 270 aa6.2□□□□□ -1.42
GTF3C3-202ENST00000409364 CDC7O00311 574 aa6.2□□□□□ -1.42
GTF3C3-202ENST00000409364 SNX2O60749 519 aa6.2□□□□□ -1.42
GTF3C3-202ENST00000409364 SUPT3HO75486 399 aa6.2□□□□□ -1.42
GTF3C3-202ENST00000409364 ECI2O75521 394 aa6.2□□□□□ -1.42
GTF3C3-202ENST00000409364 KRT34O76011 436 aa6.2□□□□□ -1.42
GTF3C3-202ENST00000409364 TM7SF2O76062 418 aa6.2□□□□□ -1.42
GTF3C3-202ENST00000409364 SLC25A14O95258 325 aaPredicted RBP6.2□□□□□ -1.42
GTF3C3-202ENST00000409364 MLYCDO95822 493 aa6.2□□□□□ -1.42
GTF3C3-202ENST00000409364 TSPAN12O95859 305 aa6.2□□□□□ -1.42
GTF3C3-202ENST00000409364 COX4I1P13073 169 aa6.2□□□□□ -1.42
GTF3C3-202ENST00000409364 FSHRP23945 695 aa6.2□□□□□ -1.42
GTF3C3-202ENST00000409364 CPA2P48052 419 aa6.2□□□□□ -1.42
GTF3C3-202ENST00000409364 NRIP1P48552 1158 aa6.2□□□□□ -1.42
GTF3C3-202ENST00000409364 SPINT3P49223 89 aa6.2□□□□□ -1.42
GTF3C3-202ENST00000409364 INHBCP55103 352 aa6.2□□□□□ -1.42
GTF3C3-202ENST00000409364 IRX1P78414 480 aaPredicted RBP6.2□□□□□ -1.42
GTF3C3-202ENST00000409364 CDC16Q13042 620 aa6.2□□□□□ -1.42
GTF3C3-202ENST00000409364 LCP2Q13094 533 aa6.2□□□□□ -1.42
GTF3C3-202ENST00000409364 CYLC2Q14093 348 aaPredicted RBP6.2□□□□□ -1.42
GTF3C3-202ENST00000409364 HERC3Q15034 1050 aa6.2□□□□□ -1.42
GTF3C3-202ENST00000409364 SHHQ15465 462 aa6.2□□□□□ -1.42
GTF3C3-202ENST00000409364 TSNQ15631 228 aaKnown RBP6.2□□□□□ -1.42
GTF3C3-202ENST00000409364 PDCD2Q16342 344 aaPredicted RBP6.2□□□□□ -1.42
GTF3C3-202ENST00000409364 EML3Q32P44 896 aa6.2□□□□□ -1.42
GTF3C3-202ENST00000409364 TTLL9Q3SXZ7 439 aa6.2□□□□□ -1.42
GTF3C3-202ENST00000409364 C9orf50Q5SZB4 431 aa6.2□□□□□ -1.42
GTF3C3-202ENST00000409364 LRRC66Q68CR7 880 aa6.2□□□□□ -1.42
GTF3C3-202ENST00000409364 TMEM215Q68D42 235 aa6.2□□□□□ -1.42
GTF3C3-202ENST00000409364 TMC5Q6UXY8 1006 aa6.2□□□□□ -1.42
GTF3C3-202ENST00000409364 EFL1Q7Z2Z2 1120 aaKnown RBP6.2□□□□□ -1.42
GTF3C3-202ENST00000409364 SPRED2Q7Z698 418 aa6.2□□□□□ -1.42
GTF3C3-202ENST00000409364 ADAMTSL2Q86TH1 951 aa6.2□□□□□ -1.42
GTF3C3-202ENST00000409364 SCUBE1Q8IWY4 988 aa6.2□□□□□ -1.42
GTF3C3-202ENST00000409364 NXPE1Q8N323 547 aa6.2□□□□□ -1.42
GTF3C3-202ENST00000409364 CHST14Q8NCH0 376 aa6.2□□□□□ -1.42
GTF3C3-202ENST00000409364 GPR26Q8NDV2 337 aa6.2□□□□□ -1.42
GTF3C3-202ENST00000409364 CFAP61Q8NHU2 1237 aa6.2□□□□□ -1.42
GTF3C3-202ENST00000409364 BPIFB1Q8TDL5 484 aa6.2□□□□□ -1.42
GTF3C3-202ENST00000409364 VOPP1Q96AW1 172 aa6.2□□□□□ -1.42
GTF3C3-202ENST00000409364 LINGO1Q96FE5 620 aa6.2□□□□□ -1.42
GTF3C3-202ENST00000409364 MRGPRX3Q96LB0 322 aa6.2□□□□□ -1.42
GTF3C3-202ENST00000409364 LRRC3BQ96PB8 259 aa6.2□□□□□ -1.42
GTF3C3-202ENST00000409364 PANX3Q96QZ0 392 aa6.2□□□□□ -1.42
GTF3C3-202ENST00000409364 COPS8Q99627 209 aa6.2□□□□□ -1.42
GTF3C3-202ENST00000409364 RTKNQ9BST9 563 aa6.2□□□□□ -1.42
GTF3C3-202ENST00000409364 SARS2Q9NP81 518 aaKnown RBP6.2□□□□□ -1.42
GTF3C3-202ENST00000409364 DZANK1Q9NVP4 752 aa6.2□□□□□ -1.42
GTF3C3-202ENST00000409364 ELOVL2Q9NXB9 296 aa6.2□□□□□ -1.42
GTF3C3-202ENST00000409364 ZDHHC3Q9NYG2 299 aa6.2□□□□□ -1.42
GTF3C3-202ENST00000409364 PKD2L2Q9NZM6 624 aa6.2□□□□□ -1.42
GTF3C3-202ENST00000409364 CD274Q9NZQ7 290 aa6.2□□□□□ -1.42
GTF3C3-202ENST00000409364 GALPQ9UBC7 116 aa6.2□□□□□ -1.42
GTF3C3-202ENST00000409364 DKK3Q9UBP4 350 aa6.2□□□□□ -1.42
GTF3C3-202ENST00000409364 MSRAQ9UJ68 235 aa6.2□□□□□ -1.42
GTF3C3-202ENST00000409364 DNMT3AQ9Y6K1 912 aaPredicted RBP6.2□□□□□ -1.42
GTF3C3-202ENST00000409364 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.19□□□□□ -1.42
GTF3C3-202ENST00000409364 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.19□□□□□ -1.42
GTF3C3-202ENST00000409364 TSPAN11A1L157 253 aa6.19□□□□□ -1.42
GTF3C3-202ENST00000409364 A8MX80 341 aa6.19□□□□□ -1.42
GTF3C3-202ENST00000409364 TTC34A8MYJ7 566 aa6.19□□□□□ -1.42
GTF3C3-202ENST00000409364 EIF3FO00303 357 aaPredicted RBP6.19□□□□□ -1.42
GTF3C3-202ENST00000409364 SDHDO14521 159 aa6.19□□□□□ -1.42
GTF3C3-202ENST00000409364 NEMP1O14524 444 aa6.19□□□□□ -1.42
GTF3C3-202ENST00000409364 UBFD1O14562 309 aaKnown RBP6.19□□□□□ -1.42
GTF3C3-202ENST00000409364 GIPC1O14908 333 aa6.19□□□□□ -1.42
GTF3C3-202ENST00000409364 AZIN1O14977 448 aa6.19□□□□□ -1.42
GTF3C3-202ENST00000409364 UBDO15205 165 aa6.19□□□□□ -1.42
GTF3C3-202ENST00000409364 VPS4BO75351 444 aa6.19□□□□□ -1.42
GTF3C3-202ENST00000409364 CIB2O75838 187 aa6.19□□□□□ -1.42
GTF3C3-202ENST00000409364 CDK14O94921 469 aa6.19□□□□□ -1.42
GTF3C3-202ENST00000409364 TRIM16O95361 564 aa6.19□□□□□ -1.42
GTF3C3-202ENST00000409364 CYP17A1P05093 508 aa6.19□□□□□ -1.42
GTF3C3-202ENST00000409364 OR56A5P0C7T3 313 aa6.19□□□□□ -1.42
GTF3C3-202ENST00000409364 CBSLP0DN79 551 aa6.19□□□□□ -1.42
GTF3C3-202ENST00000409364 XPAP23025 273 aaPredicted RBP6.19□□□□□ -1.42
GTF3C3-202ENST00000409364 PIK3R1P27986 724 aa6.19□□□□□ -1.42
GTF3C3-202ENST00000409364 EEF1DP29692 281 aaKnown RBP6.19□□□□□ -1.42
GTF3C3-202ENST00000409364 VIPR1P32241 457 aa6.19□□□□□ -1.42
GTF3C3-202ENST00000409364 CBSP35520 551 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms