RNA–Protein interactions for RNA: ENST00000409326.6

PTCD3-202, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 522 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-202ENST00000409326 RPL21P46778 160 aaKnown RBP20.03■□□□□ 0.8
PTCD3-202ENST00000409326 ACTR1AP61163 376 aa20.03■□□□□ 0.8
PTCD3-202ENST00000409326 SIM1P81133 766 aaPredicted RBP20.03■□□□□ 0.8
PTCD3-202ENST00000409326 SLC30A9Q6PML9 568 aa20.03■□□□□ 0.8
PTCD3-202ENST00000409326 TAS2R42Q7RTR8 314 aa20.03■□□□□ 0.8
PTCD3-202ENST00000409326 SERPINA9Q86WD7 417 aa20.03■□□□□ 0.8
PTCD3-202ENST00000409326 TRAPPC5Q8IUR0 188 aa20.03■□□□□ 0.8
PTCD3-202ENST00000409326 ZNF547Q8IVP9 402 aa20.03■□□□□ 0.8
PTCD3-202ENST00000409326 PIANPQ8IYJ0 282 aa20.03■□□□□ 0.8
PTCD3-202ENST00000409326 AGGF1Q8N302 714 aaeCLIP20.03■□□□□ 0.8
PTCD3-202ENST00000409326 BBOF1Q8ND07 529 aa20.03■□□□□ 0.8
PTCD3-202ENST00000409326 MNS1Q8NEH6 495 aa20.03■□□□□ 0.8
PTCD3-202ENST00000409326 FAM46DQ8NEK8 389 aa20.03■□□□□ 0.8
PTCD3-202ENST00000409326 OR6P1Q8NGX9 317 aa20.03■□□□□ 0.8
PTCD3-202ENST00000409326 OR4L1Q8NH43 312 aa20.03■□□□□ 0.8
PTCD3-202ENST00000409326 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.03■□□□□ 0.8
PTCD3-202ENST00000409326 MFSD3Q96ES6 412 aa20.03■□□□□ 0.8
PTCD3-202ENST00000409326 COPS8Q99627 209 aa20.03■□□□□ 0.8
PTCD3-202ENST00000409326 ZDHHC3Q9NYG2 299 aa20.03■□□□□ 0.8
PTCD3-202ENST00000409326 NCKIPSDQ9NZQ3 722 aa20.03■□□□□ 0.8
PTCD3-202ENST00000409326 TAAR2Q9P1P5 351 aa20.03■□□□□ 0.8
PTCD3-202ENST00000409326 GPR34Q9UPC5 381 aa20.03■□□□□ 0.8
PTCD3-202ENST00000409326 SNX24Q9Y343 169 aa20.03■□□□□ 0.8
PTCD3-202ENST00000409326 SPTBN2O15020 2390 aa20.02■□□□□ 0.8
PTCD3-202ENST00000409326 IGLV3-16A0A075B6K0 115 aa20.02■□□□□ 0.8
PTCD3-202ENST00000409326 LY6G6EA0A0G2JKS1 128 aa20.02■□□□□ 0.8
PTCD3-202ENST00000409326 FAM237BA0A1B0GVD1 139 aa20.02■□□□□ 0.8
PTCD3-202ENST00000409326 TP73O15350 636 aa20.02■□□□□ 0.8
PTCD3-202ENST00000409326 RALBP11234 206 aa20.02■□□□□ 0.8
PTCD3-202ENST00000409326 CKMT1AP12532 417 aa20.02■□□□□ 0.8
PTCD3-202ENST00000409326 CKMT2P17540 419 aa20.02■□□□□ 0.8
PTCD3-202ENST00000409326 CTSCP53634 463 aa20.02■□□□□ 0.8
PTCD3-202ENST00000409326 DAB2P98082 770 aa20.02■□□□□ 0.8
PTCD3-202ENST00000409326 B4GALNT1Q00973 533 aa20.02■□□□□ 0.8
PTCD3-202ENST00000409326 DNAJC3Q13217 504 aa20.02■□□□□ 0.8
PTCD3-202ENST00000409326 C11orf96Q7Z7L8 435 aa20.02■□□□□ 0.8
PTCD3-202ENST00000409326 ARL10Q8N8L6 244 aa20.02■□□□□ 0.8
PTCD3-202ENST00000409326 GLMNQ92990 594 aa20.02■□□□□ 0.8
PTCD3-202ENST00000409326 DCUN1D1Q96GG9 259 aa20.02■□□□□ 0.8
PTCD3-202ENST00000409326 ZNF514Q96K75 400 aaPredicted RBP20.02■□□□□ 0.8
PTCD3-202ENST00000409326 SIGLEC10Q96LC7 697 aa20.02■□□□□ 0.8
PTCD3-202ENST00000409326 TIMM29Q9BSF4 260 aa20.02■□□□□ 0.8
PTCD3-202ENST00000409326 RAB17Q9H0T7 212 aa20.02■□□□□ 0.8
PTCD3-202ENST00000409326 EVA1BQ9NVM1 165 aa20.02■□□□□ 0.8
PTCD3-202ENST00000409326 TOR4AQ9NXH8 423 aa20.02■□□□□ 0.8
PTCD3-202ENST00000409326 U3KQA8 63 aa20.02■□□□□ 0.8
PTCD3-202ENST00000409326 RP1P56715 2156 aa20.02■□□□□ 0.8
PTCD3-202ENST00000409326 CACNA1AO00555 2505 aa20.02■□□□□ 0.79
PTCD3-202ENST00000409326 ASXL3Q9C0F0 2248 aa20.02■□□□□ 0.79
PTCD3-202ENST00000409326 OR2AG2A6NM03 316 aa20.01■□□□□ 0.79
PTCD3-202ENST00000409326 CFAP99D6REC4 459 aa20.01■□□□□ 0.79
PTCD3-202ENST00000409326 ACP1P24666 158 aa20.01■□□□□ 0.79
PTCD3-202ENST00000409326 ACADVLP49748 655 aa20.01■□□□□ 0.79
PTCD3-202ENST00000409326 CLCNKAP51800 687 aa20.01■□□□□ 0.79
PTCD3-202ENST00000409326 ITIH4Q14624 930 aa20.01■□□□□ 0.79
PTCD3-202ENST00000409326 DBN1Q16643 649 aa20.01■□□□□ 0.79
PTCD3-202ENST00000409326 INSCQ1MX18 579 aa20.01■□□□□ 0.79
PTCD3-202ENST00000409326 PLA2G4EQ3MJ16 856 aa20.01■□□□□ 0.79
PTCD3-202ENST00000409326 FASTKD1Q53R41 847 aaKnown RBP20.01■□□□□ 0.79
PTCD3-202ENST00000409326 DNAJC21Q5F1R6 531 aaKnown RBP20.01■□□□□ 0.79
PTCD3-202ENST00000409326 FNBP1LQ5T0N5 605 aa20.01■□□□□ 0.79
PTCD3-202ENST00000409326 DUPD1Q68J44 220 aa20.01■□□□□ 0.79
PTCD3-202ENST00000409326 KIAA0930Q6ICG6 404 aaPredicted RBP20.01■□□□□ 0.79
PTCD3-202ENST00000409326 C8orf74Q6P047 294 aa20.01■□□□□ 0.79
PTCD3-202ENST00000409326 OGFOD3Q6PK18 319 aa20.01■□□□□ 0.79
PTCD3-202ENST00000409326 TMEM220Q6QAJ8 160 aa20.01■□□□□ 0.79
PTCD3-202ENST00000409326 CES3Q6UWW8 571 aa20.01■□□□□ 0.79
PTCD3-202ENST00000409326 TMEM135Q86UB9 458 aa20.01■□□□□ 0.79
PTCD3-202ENST00000409326 SLC35F3Q8IY50 421 aa20.01■□□□□ 0.79
PTCD3-202ENST00000409326 KYQ8NBH2 561 aa20.01■□□□□ 0.79
PTCD3-202ENST00000409326 CCDC97Q96F63 343 aaPredicted RBP20.01■□□□□ 0.79
PTCD3-202ENST00000409326 DPEP2Q9H4A9 486 aa20.01■□□□□ 0.79
PTCD3-202ENST00000409326 SPATS2LQ9NUQ6 558 aaKnown RBP20.01■□□□□ 0.79
PTCD3-202ENST00000409326 SIRPGQ9P1W8 387 aa20.01■□□□□ 0.79
PTCD3-202ENST00000409326 WHRNQ9P202 907 aa20.01■□□□□ 0.79
PTCD3-202ENST00000409326 ANAPC5Q9UJX4 755 aa20.01■□□□□ 0.79
PTCD3-202ENST00000409326 KCNK6Q9Y257 313 aa20.01■□□□□ 0.79
PTCD3-202ENST00000409326 UTP11Q9Y3A2 253 aaKnown RBP20.01■□□□□ 0.79
PTCD3-202ENST00000409326 CTAGE15A4D2H0 777 aa20■□□□□ 0.79
PTCD3-202ENST00000409326 B4DGG1 531 aa20■□□□□ 0.79
PTCD3-202ENST00000409326 FTH1P19P0C7X4 201 aa20■□□□□ 0.79
PTCD3-202ENST00000409326 CTAGE8P0CG41 777 aa20■□□□□ 0.79
PTCD3-202ENST00000409326 ATP1B2P14415 290 aaPredicted RBP20■□□□□ 0.79
PTCD3-202ENST00000409326 ZNF7P17097 686 aaPredicted RBP20■□□□□ 0.79
PTCD3-202ENST00000409326 PAMP19021 973 aa20■□□□□ 0.79
PTCD3-202ENST00000409326 ARNTP27540 789 aa20■□□□□ 0.79
PTCD3-202ENST00000409326 RPIAP49247 311 aa20■□□□□ 0.79
PTCD3-202ENST00000409326 DUSP3P51452 185 aaPredicted RBP20■□□□□ 0.79
PTCD3-202ENST00000409326 DHX9Q08211 1270 aaKnown RBP20■□□□□ 0.79
PTCD3-202ENST00000409326 CALCOCO2Q13137 446 aa20■□□□□ 0.79
PTCD3-202ENST00000409326 NR0B2Q15466 257 aa20■□□□□ 0.79
PTCD3-202ENST00000409326 BCL7AQ4VC05 210 aa20■□□□□ 0.79
PTCD3-202ENST00000409326 LYPLAL1Q5VWZ2 237 aa20■□□□□ 0.79
PTCD3-202ENST00000409326 CERS6Q6ZMG9 384 aa20■□□□□ 0.79
PTCD3-202ENST00000409326 DET1Q7L5Y6 550 aa20■□□□□ 0.79
PTCD3-202ENST00000409326 CTAGE6Q86UF2 777 aa20■□□□□ 0.79
PTCD3-202ENST00000409326 CTAGE4Q8IX94 777 aa20■□□□□ 0.79
PTCD3-202ENST00000409326 PDIK1LQ8N165 341 aa20■□□□□ 0.79
PTCD3-202ENST00000409326 GPR156Q8NFN8 814 aa20■□□□□ 0.79
PTCD3-202ENST00000409326 ZNF669Q96BR6 464 aaPredicted RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms