RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 NUMBP49757 651 aa17.53■□□□□ 0.4
SMPD4-202ENST00000409031 NRLP54845 237 aa17.53■□□□□ 0.4
SMPD4-202ENST00000409031 SUZ12Q15022 739 aaKnown RBP17.53■□□□□ 0.4
SMPD4-202ENST00000409031 LY6KQ17RY6 165 aa17.53■□□□□ 0.4
SMPD4-202ENST00000409031 ZNF181Q2M3W8 571 aa17.53■□□□□ 0.4
SMPD4-202ENST00000409031 ESRP1Q6NXG1 681 aaKnown RBP17.53■□□□□ 0.4
SMPD4-202ENST00000409031 CCM2LQ9NUG4 571 aaPredicted RBP17.53■□□□□ 0.4
SMPD4-202ENST00000409031 SPATA31A6Q5VVP1 1343 aa17.52■□□□□ 0.4
SMPD4-202ENST00000409031 AXLP30530 894 aa17.52■□□□□ 0.4
SMPD4-202ENST00000409031 ARSFP54793 590 aa17.52■□□□□ 0.4
SMPD4-202ENST00000409031 CYP4F8P98187 520 aa17.52■□□□□ 0.4
SMPD4-202ENST00000409031 MAB21L1Q13394 359 aa17.52■□□□□ 0.4
SMPD4-202ENST00000409031 BOP1Q14137 746 aaKnown RBP17.52■□□□□ 0.4
SMPD4-202ENST00000409031 SIX1Q15475 284 aaPredicted RBP17.52■□□□□ 0.4
SMPD4-202ENST00000409031 EEF1DP3Q658K8 133 aa17.52■□□□□ 0.4
SMPD4-202ENST00000409031 FIBCD1Q8N539 461 aa17.52■□□□□ 0.4
SMPD4-202ENST00000409031 TMEM159Q96B96 161 aa17.52■□□□□ 0.4
SMPD4-202ENST00000409031 CRELD1Q96HD1 420 aa17.52■□□□□ 0.4
SMPD4-202ENST00000409031 SIGLEC10Q96LC7 697 aa17.52■□□□□ 0.4
SMPD4-202ENST00000409031 ERMAPQ96PL5 475 aaPredicted RBP17.52■□□□□ 0.4
SMPD4-202ENST00000409031 TSSK3Q96PN8 268 aa17.52■□□□□ 0.4
SMPD4-202ENST00000409031 CLCA2Q9UQC9 943 aa17.52■□□□□ 0.4
SMPD4-202ENST00000409031 OXSR1O95747 527 aaPredicted RBP17.52■□□□□ 0.4
SMPD4-202ENST00000409031 FYNP06241 537 aa17.52■□□□□ 0.4
SMPD4-202ENST00000409031 CD72P21854 359 aa17.52■□□□□ 0.4
SMPD4-202ENST00000409031 CHRNA5P30532 468 aa17.52■□□□□ 0.4
SMPD4-202ENST00000409031 HOXD13P35453 343 aa17.52■□□□□ 0.4
SMPD4-202ENST00000409031 MICALL2Q8IY33 904 aa17.52■□□□□ 0.4
SMPD4-202ENST00000409031 SCML4Q8N228 414 aa17.52■□□□□ 0.4
SMPD4-202ENST00000409031 SLC13A3Q8WWT9 602 aa17.52■□□□□ 0.4
SMPD4-202ENST00000409031 SLC4A9Q96Q91 983 aa17.52■□□□□ 0.4
SMPD4-202ENST00000409031 TMEM246Q9BRR3 403 aa17.52■□□□□ 0.4
SMPD4-202ENST00000409031 SPATA5L1Q9BVQ7 753 aa17.52■□□□□ 0.4
SMPD4-202ENST00000409031 GSDMCQ9BYG8 508 aa17.52■□□□□ 0.4
SMPD4-202ENST00000409031 SNTG1Q9NSN8 517 aa17.52■□□□□ 0.4
SMPD4-202ENST00000409031 NKIRAS2Q9NYR9 191 aa17.52■□□□□ 0.4
SMPD4-202ENST00000409031 SLC17A6Q9P2U8 582 aa17.52■□□□□ 0.4
SMPD4-202ENST00000409031 UXTQ9UBK9 157 aaPredicted RBP17.52■□□□□ 0.4
SMPD4-202ENST00000409031 PTPN3P26045 913 aa17.52■□□□□ 0.39
SMPD4-202ENST00000409031 GRIA1P42261 906 aa17.52■□□□□ 0.39
SMPD4-202ENST00000409031 SLC9A3P48764 834 aa17.52■□□□□ 0.39
SMPD4-202ENST00000409031 MTPNP58546 118 aa17.52■□□□□ 0.39
SMPD4-202ENST00000409031 RETSATQ6NUM9 610 aa17.52■□□□□ 0.39
SMPD4-202ENST00000409031 DAW1Q8N136 415 aa17.52■□□□□ 0.39
SMPD4-202ENST00000409031 KIFC1Q9BW19 673 aa17.52■□□□□ 0.39
SMPD4-202ENST00000409031 TRPM5Q9NZQ8 1165 aa17.52■□□□□ 0.39
SMPD4-202ENST00000409031 LYVE1Q9Y5Y7 322 aa17.52■□□□□ 0.39
SMPD4-202ENST00000409031 FADS2P1A8MWK0 482 aa17.52■□□□□ 0.39
SMPD4-202ENST00000409031 SGTAO43765 313 aa17.52■□□□□ 0.39
SMPD4-202ENST00000409031 PSKH1P11801 424 aa17.52■□□□□ 0.39
SMPD4-202ENST00000409031 IL7RP16871 459 aa17.52■□□□□ 0.39
SMPD4-202ENST00000409031 ERVK-8P63133 956 aa17.52■□□□□ 0.39
SMPD4-202ENST00000409031 SCRN3Q0VDG4 424 aa17.52■□□□□ 0.39
SMPD4-202ENST00000409031 OTOP3Q7RTS5 596 aa17.52■□□□□ 0.39
SMPD4-202ENST00000409031 IGDCC3Q8IVU1 814 aa17.52■□□□□ 0.39
SMPD4-202ENST00000409031 FBXO16Q8IX29 292 aaPredicted RBP17.52■□□□□ 0.39
SMPD4-202ENST00000409031 TRNT1Q96Q11 434 aaKnown RBP17.52■□□□□ 0.39
SMPD4-202ENST00000409031 CPNE5Q9HCH3 593 aa17.52■□□□□ 0.39
SMPD4-202ENST00000409031 CHD2O14647 1828 aaKnown RBP17.51■□□□□ 0.39
SMPD4-202ENST00000409031 GSTT2P0CG29 244 aa17.51■□□□□ 0.39
SMPD4-202ENST00000409031 GSTT2BP0CG30 244 aa17.51■□□□□ 0.39
SMPD4-202ENST00000409031 LPOP22079 712 aaPredicted RBP17.51■□□□□ 0.39
SMPD4-202ENST00000409031 MXD1Q05195 221 aa17.51■□□□□ 0.39
SMPD4-202ENST00000409031 RIPPLY1Q0D2K3 151 aa17.51■□□□□ 0.39
SMPD4-202ENST00000409031 DPYSL2Q16555 572 aa17.51■□□□□ 0.39
SMPD4-202ENST00000409031 PLEKHG4Q58EX7 1191 aa17.51■□□□□ 0.39
SMPD4-202ENST00000409031 STYK1Q6J9G0 422 aa17.51■□□□□ 0.39
SMPD4-202ENST00000409031 DCDC5Q6ZRR9 648 aa17.51■□□□□ 0.39
SMPD4-202ENST00000409031 UBE2J2Q8N2K1 259 aa17.51■□□□□ 0.39
SMPD4-202ENST00000409031 ANKFN1Q8N957 763 aa17.51■□□□□ 0.39
SMPD4-202ENST00000409031 AKTIPQ9H8T0 292 aa17.51■□□□□ 0.39
SMPD4-202ENST00000409031 RFPL2O75678 378 aa17.51■□□□□ 0.39
SMPD4-202ENST00000409031 RECQL4O94761 1208 aa17.51■□□□□ 0.39
SMPD4-202ENST00000409031 GLUD2P49448 558 aa17.51■□□□□ 0.39
SMPD4-202ENST00000409031 KIAA0930Q6ICG6 404 aaPredicted RBP17.51■□□□□ 0.39
SMPD4-202ENST00000409031 DCLRE1AQ6PJP8 1040 aa17.51■□□□□ 0.39
SMPD4-202ENST00000409031 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.51■□□□□ 0.39
SMPD4-202ENST00000409031 SLC15A4Q8N697 577 aa17.51■□□□□ 0.39
SMPD4-202ENST00000409031 GOLM1Q8NBJ4 401 aa17.51■□□□□ 0.39
SMPD4-202ENST00000409031 MUS81Q96NY9 551 aa17.51■□□□□ 0.39
SMPD4-202ENST00000409031 TAS2R7Q9NYW3 318 aa17.51■□□□□ 0.39
SMPD4-202ENST00000409031 MAN2B2Q9Y2E5 1009 aa17.51■□□□□ 0.39
SMPD4-202ENST00000409031 NEMP2A6NFY4 417 aa17.51■□□□□ 0.39
SMPD4-202ENST00000409031 CHST10O43529 356 aa17.51■□□□□ 0.39
SMPD4-202ENST00000409031 LRATO95237 230 aa17.51■□□□□ 0.39
SMPD4-202ENST00000409031 ST8SIA6P61647 398 aa17.51■□□□□ 0.39
SMPD4-202ENST00000409031 ZNF460Q14592 562 aa17.51■□□□□ 0.39
SMPD4-202ENST00000409031 TSC22D1Q15714 1073 aa17.51■□□□□ 0.39
SMPD4-202ENST00000409031 MEP1AQ16819 746 aa17.51■□□□□ 0.39
SMPD4-202ENST00000409031 GTF3C2Q8WUA4 911 aaPredicted RBP17.51■□□□□ 0.39
SMPD4-202ENST00000409031 FRMD6Q96NE9 622 aa17.51■□□□□ 0.39
SMPD4-202ENST00000409031 SLC30A2Q9BRI3 323 aa17.51■□□□□ 0.39
SMPD4-202ENST00000409031 FAM198AQ9UFP1 575 aa17.51■□□□□ 0.39
SMPD4-202ENST00000409031 UBA1P22314 1058 aaKnown RBP17.5■□□□□ 0.39
SMPD4-202ENST00000409031 WSCD2Q2TBF2 565 aa17.5■□□□□ 0.39
SMPD4-202ENST00000409031 TBC1D25Q3MII6 688 aa17.5■□□□□ 0.39
SMPD4-202ENST00000409031 ZNF717Q9BY31 904 aaPredicted RBP17.5■□□□□ 0.39
SMPD4-202ENST00000409031 DUSP16Q9BY84 665 aa17.5■□□□□ 0.39
SMPD4-202ENST00000409031 DLG5Q8TDM6 1919 aa17.5■□□□□ 0.39
SMPD4-202ENST00000409031 BCL9LQ86UU0 1499 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms