RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 HLA-DPA1P20036 260 aa15.15■□□□□ 0.02
TPM1-207ENST00000403994 CSTF2P33240 577 aaKnown RBP eCLIP15.15■□□□□ 0.02
TPM1-207ENST00000403994 TNNT3P45378 269 aaPredicted RBP15.15■□□□□ 0.02
TPM1-207ENST00000403994 MAPK9P45984 424 aa15.15■□□□□ 0.02
TPM1-207ENST00000403994 MPP3Q13368 585 aa15.15■□□□□ 0.02
TPM1-207ENST00000403994 TMEM164Q5U3C3 297 aa15.15■□□□□ 0.02
TPM1-207ENST00000403994 GLT6D1Q7Z4J2 308 aa15.15■□□□□ 0.02
TPM1-207ENST00000403994 SLC25A41Q8N5S1 370 aa15.15■□□□□ 0.02
TPM1-207ENST00000403994 BMPERQ8N8U9 685 aa15.15■□□□□ 0.02
TPM1-207ENST00000403994 AVL9Q8NBF6 648 aa15.15■□□□□ 0.02
TPM1-207ENST00000403994 ART4Q93070 314 aa15.15■□□□□ 0.02
TPM1-207ENST00000403994 SH3KBP1Q96B97 665 aa15.15■□□□□ 0.02
TPM1-207ENST00000403994 TAAR9Q96RI9 348 aa15.15■□□□□ 0.02
TPM1-207ENST00000403994 DDA1Q9BW61 102 aa15.15■□□□□ 0.02
TPM1-207ENST00000403994 FSD1LQ9BXM9 530 aa15.15■□□□□ 0.02
TPM1-207ENST00000403994 SEMA4CQ9C0C4 833 aa15.15■□□□□ 0.02
TPM1-207ENST00000403994 RBSNQ9H1K0 784 aa15.15■□□□□ 0.02
TPM1-207ENST00000403994 HACD3Q9P035 362 aa15.15■□□□□ 0.02
TPM1-207ENST00000403994 SCHIP1Q9P0W5 487 aaPredicted RBP15.15■□□□□ 0.02
TPM1-207ENST00000403994 DNAJC16Q9Y2G8 782 aa15.15■□□□□ 0.02
TPM1-207ENST00000403994 PCDHGA4Q9Y5G9 962 aa15.15■□□□□ 0.02
TPM1-207ENST00000403994 PCDHGA3Q9Y5H0 932 aa15.15■□□□□ 0.02
TPM1-207ENST00000403994 MN1Q10571 1320 aaPredicted RBP15.15■□□□□ 0.02
TPM1-207ENST00000403994 OR5K4A6NMS3 321 aa15.14■□□□□ 0.01
TPM1-207ENST00000403994 EFCAB7A8K855 629 aa15.14■□□□□ 0.01
TPM1-207ENST00000403994 B4E171 279 aa15.14■□□□□ 0.01
TPM1-207ENST00000403994 GAPDHSO14556 408 aaPredicted RBP15.14■□□□□ 0.01
TPM1-207ENST00000403994 ZNF7P17097 686 aaPredicted RBP15.14■□□□□ 0.01
TPM1-207ENST00000403994 RBL1P28749 1068 aa15.14■□□□□ 0.01
TPM1-207ENST00000403994 PTPN7P35236 360 aa15.14■□□□□ 0.01
TPM1-207ENST00000403994 SPAM1P38567 509 aa15.14■□□□□ 0.01
TPM1-207ENST00000403994 TSPAN7P41732 249 aa15.14■□□□□ 0.01
TPM1-207ENST00000403994 COPS2P61201 443 aa15.14■□□□□ 0.01
TPM1-207ENST00000403994 XRCC4Q13426 336 aa15.14■□□□□ 0.01
TPM1-207ENST00000403994 LY6DQ14210 128 aa15.14■□□□□ 0.01
TPM1-207ENST00000403994 SEPT7Q16181 437 aaKnown RBP15.14■□□□□ 0.01
TPM1-207ENST00000403994 MANEAQ5SRI9 462 aa15.14■□□□□ 0.01
TPM1-207ENST00000403994 FAM151BQ6UXP7 276 aa15.14■□□□□ 0.01
TPM1-207ENST00000403994 RAD9BQ6WBX8 426 aa15.14■□□□□ 0.01
TPM1-207ENST00000403994 PID1Q7Z2X4 250 aa15.14■□□□□ 0.01
TPM1-207ENST00000403994 C11orf96Q7Z7L8 435 aa15.14■□□□□ 0.01
TPM1-207ENST00000403994 FAM129CQ86XR2 697 aa15.14■□□□□ 0.01
TPM1-207ENST00000403994 TRAPPC5Q8IUR0 188 aa15.14■□□□□ 0.01
TPM1-207ENST00000403994 TMTC1Q8IUR5 882 aa15.14■□□□□ 0.01
TPM1-207ENST00000403994 ACTL9Q8TC94 416 aa15.14■□□□□ 0.01
TPM1-207ENST00000403994 BLOC1S5Q8TDH9 187 aa15.14■□□□□ 0.01
TPM1-207ENST00000403994 SGF29Q96ES7 293 aa15.14■□□□□ 0.01
TPM1-207ENST00000403994 TBC1D10AQ9BXI6 508 aa15.14■□□□□ 0.01
TPM1-207ENST00000403994 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.14■□□□□ 0.01
TPM1-207ENST00000403994 C10orf88Q9H8K7 445 aa15.14■□□□□ 0.01
TPM1-207ENST00000403994 IL26Q9NPH9 171 aa15.14■□□□□ 0.01
TPM1-207ENST00000403994 OCIAD1Q9NX40 245 aa15.14■□□□□ 0.01
TPM1-207ENST00000403994 IL17CQ9P0M4 197 aa15.14■□□□□ 0.01
TPM1-207ENST00000403994 TRHDEQ9UKU6 1024 aa15.14■□□□□ 0.01
TPM1-207ENST00000403994 B3GALT1Q9Y5Z6 326 aa15.14■□□□□ 0.01
TPM1-207ENST00000403994 EPN1Q9Y6I3 576 aaPredicted RBP15.14■□□□□ 0.01
TPM1-207ENST00000403994 DUSP10Q9Y6W6 482 aa15.14■□□□□ 0.01
TPM1-207ENST00000403994 PDZK1P1A8MUH7 402 aa15.13■□□□□ 0.01
TPM1-207ENST00000403994 BTNL10A8MVZ5 291 aa15.13■□□□□ 0.01
TPM1-207ENST00000403994 H7C0C1 242 aa15.13■□□□□ 0.01
TPM1-207ENST00000403994 CDK14O94921 469 aa15.13■□□□□ 0.01
TPM1-207ENST00000403994 IPO7O95373 1038 aaKnown RBP15.13■□□□□ 0.01
TPM1-207ENST00000403994 WT1P19544 449 aaPredicted RBP15.13■□□□□ 0.01
TPM1-207ENST00000403994 ATP5OP48047 213 aa15.13■□□□□ 0.01
TPM1-207ENST00000403994 OTUD4Q01804 1114 aaKnown RBP15.13■□□□□ 0.01
TPM1-207ENST00000403994 SNAP47Q5SQN1 464 aa15.13■□□□□ 0.01
TPM1-207ENST00000403994 CCDC181Q5TID7 509 aa15.13■□□□□ 0.01
TPM1-207ENST00000403994 ZDHHC20Q5W0Z9 365 aa15.13■□□□□ 0.01
TPM1-207ENST00000403994 ARHGAP22Q7Z5H3 698 aa15.13■□□□□ 0.01
TPM1-207ENST00000403994 LRRC57Q8N9N7 239 aa15.13■□□□□ 0.01
TPM1-207ENST00000403994 ACRBPQ8NEB7 543 aa15.13■□□□□ 0.01
TPM1-207ENST00000403994 DDHD1Q8NEL9 900 aa15.13■□□□□ 0.01
TPM1-207ENST00000403994 GDAP1Q8TB36 358 aa15.13■□□□□ 0.01
TPM1-207ENST00000403994 JPH3Q8WXH2 748 aaPredicted RBP15.13■□□□□ 0.01
TPM1-207ENST00000403994 NCSTNQ92542 709 aa15.13■□□□□ 0.01
TPM1-207ENST00000403994 ALG3Q92685 438 aa15.13■□□□□ 0.01
TPM1-207ENST00000403994 CALR3Q96L12 384 aaKnown RBP15.13■□□□□ 0.01
TPM1-207ENST00000403994 FICDQ9BVA6 458 aa15.13■□□□□ 0.01
TPM1-207ENST00000403994 LACRTQ9GZZ8 138 aa15.13■□□□□ 0.01
TPM1-207ENST00000403994 EPB41L1Q9H4G0 881 aa15.13■□□□□ 0.01
TPM1-207ENST00000403994 UCK1Q9HA47 277 aa15.13■□□□□ 0.01
TPM1-207ENST00000403994 SLC39A1Q9NY26 324 aa15.13■□□□□ 0.01
TPM1-207ENST00000403994 EFR3BQ9Y2G0 817 aa15.13■□□□□ 0.01
TPM1-207ENST00000403994 PCDHB11Q9Y5F2 797 aa15.13■□□□□ 0.01
TPM1-207ENST00000403994 PCDHA3Q9Y5H8 950 aa15.13■□□□□ 0.01
TPM1-207ENST00000403994 GLYATL1P3A0A0U1RQE8 302 aa15.12■□□□□ 0.01
TPM1-207ENST00000403994 CCDC66A2RUB6 948 aa15.12■□□□□ 0.01
TPM1-207ENST00000403994 A8MU76 341 aa15.12■□□□□ 0.01
TPM1-207ENST00000403994 BUD23O43709 281 aaKnown RBP15.12■□□□□ 0.01
TPM1-207ENST00000403994 BRAFP15056 766 aa15.12■□□□□ 0.01
TPM1-207ENST00000403994 XRCC1P18887 633 aaPredicted RBP15.12■□□□□ 0.01
TPM1-207ENST00000403994 CTNNA2P26232 953 aa15.12■□□□□ 0.01
TPM1-207ENST00000403994 VAV2P52735 878 aa15.12■□□□□ 0.01
TPM1-207ENST00000403994 GFERP55789 205 aa15.12■□□□□ 0.01
TPM1-207ENST00000403994 RAB15P59190 212 aa15.12■□□□□ 0.01
TPM1-207ENST00000403994 GTF2H3Q13889 308 aa15.12■□□□□ 0.01
TPM1-207ENST00000403994 CHRNA6Q15825 494 aa15.12■□□□□ 0.01
TPM1-207ENST00000403994 ANKS6Q68DC2 871 aa15.12■□□□□ 0.01
TPM1-207ENST00000403994 ITPRIPL1Q6GPH6 555 aa15.12■□□□□ 0.01
TPM1-207ENST00000403994 TMEM26Q6ZUK4 368 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms