RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 KCNK15Q9H427 330 aa3.83□□□□□ -1.8
HMGB1P17-201ENST00000403495 RABEP2Q9H5N1 569 aa3.83□□□□□ -1.8
HMGB1P17-201ENST00000403495 MRPL44Q9H9J2 332 aaKnown RBP3.83□□□□□ -1.8
HMGB1P17-201ENST00000403495 CHMP1AQ9HD42 196 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P17-201ENST00000403495 MBNL1Q9NR56 388 aaKnown RBP3.83□□□□□ -1.8
HMGB1P17-201ENST00000403495 PSD3Q9NYI0 1048 aa3.83□□□□□ -1.8
HMGB1P17-201ENST00000403495 HAO2Q9NYQ3 351 aa3.83□□□□□ -1.8
HMGB1P17-201ENST00000403495 KLHL9Q9P2J3 617 aa3.83□□□□□ -1.8
HMGB1P17-201ENST00000403495 ANAPC2Q9UJX6 822 aa3.83□□□□□ -1.8
HMGB1P17-201ENST00000403495 ATXN2Q99700 1313 aaKnown RBP3.83□□□□□ -1.8
HMGB1P17-201ENST00000403495 PDS5AQ29RF7 1337 aaKnown RBP3.82□□□□□ -1.8
HMGB1P17-201ENST00000403495 IGLV5-52A0A0A0MRZ9 124 aa3.82□□□□□ -1.8
HMGB1P17-201ENST00000403495 A0A1W2PRQ8 180 aa3.82□□□□□ -1.8
HMGB1P17-201ENST00000403495 A8MXE2 369 aa3.82□□□□□ -1.8
HMGB1P17-201ENST00000403495 TMEM178BH3BS89 294 aa3.82□□□□□ -1.8
HMGB1P17-201ENST00000403495 KCNJ13O60928 360 aa3.82□□□□□ -1.8
HMGB1P17-201ENST00000403495 TPOP07202 933 aa3.82□□□□□ -1.8
HMGB1P17-201ENST00000403495 MYBL1P10243 752 aa3.82□□□□□ -1.8
HMGB1P17-201ENST00000403495 CCR3P51677 355 aa3.82□□□□□ -1.8
HMGB1P17-201ENST00000403495 CLCNKAP51800 687 aa3.82□□□□□ -1.8
HMGB1P17-201ENST00000403495 PPARDQ03181 441 aa3.82□□□□□ -1.8
HMGB1P17-201ENST00000403495 CRYZQ08257 329 aaKnown RBP3.82□□□□□ -1.8
HMGB1P17-201ENST00000403495 MYBPHQ13203 477 aa3.82□□□□□ -1.8
HMGB1P17-201ENST00000403495 SNAPC1Q16533 368 aa3.82□□□□□ -1.8
HMGB1P17-201ENST00000403495 SYT16Q17RD7 645 aa3.82□□□□□ -1.8
HMGB1P17-201ENST00000403495 ALDH1L2Q3SY69 923 aa3.82□□□□□ -1.8
HMGB1P17-201ENST00000403495 ATP13A5Q4VNC0 1218 aa3.82□□□□□ -1.8
HMGB1P17-201ENST00000403495 DAB2IPQ5VWQ8 1189 aa3.82□□□□□ -1.8
HMGB1P17-201ENST00000403495 SHQ1Q6PI26 577 aaKnown RBP3.82□□□□□ -1.8
HMGB1P17-201ENST00000403495 GPR180Q86V85 440 aa3.82□□□□□ -1.8
HMGB1P17-201ENST00000403495 EPHX4Q8IUS5 362 aa3.82□□□□□ -1.8
HMGB1P17-201ENST00000403495 MAP7D3Q8IWC1 876 aa3.82□□□□□ -1.8
HMGB1P17-201ENST00000403495 TC2NQ8N9U0 490 aa3.82□□□□□ -1.8
HMGB1P17-201ENST00000403495 SPATA22Q8NHS9 363 aa3.82□□□□□ -1.8
HMGB1P17-201ENST00000403495 WDR20Q8TBZ3 569 aa3.82□□□□□ -1.8
HMGB1P17-201ENST00000403495 NXNL1Q96CM4 212 aa3.82□□□□□ -1.8
HMGB1P17-201ENST00000403495 RMDN1Q96DB5 314 aa3.82□□□□□ -1.8
HMGB1P17-201ENST00000403495 HMCESQ96FZ2 354 aa3.82□□□□□ -1.8
HMGB1P17-201ENST00000403495 CCDC34Q96HJ3 373 aa3.82□□□□□ -1.8
HMGB1P17-201ENST00000403495 ZNF830Q96NB3 372 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P17-201ENST00000403495 MAGIXQ9H6Y5 334 aa3.82□□□□□ -1.8
HMGB1P17-201ENST00000403495 TBC1D17Q9HA65 648 aa3.82□□□□□ -1.8
HMGB1P17-201ENST00000403495 SH3GLB2Q9NR46 395 aa3.82□□□□□ -1.8
HMGB1P17-201ENST00000403495 GDE1Q9NZC3 331 aa3.82□□□□□ -1.8
HMGB1P17-201ENST00000403495 TTC3P53804 2025 aa3.82□□□□□ -1.8
HMGB1P17-201ENST00000403495 LOC100509620A0A075B734 347 aa3.81□□□□□ -1.8
HMGB1P17-201ENST00000403495 CD8B2A6NJW9 211 aa3.81□□□□□ -1.8
HMGB1P17-201ENST00000403495 MID1O15344 667 aa3.81□□□□□ -1.8
HMGB1P17-201ENST00000403495 SLC16A5O15375 505 aa3.81□□□□□ -1.8
HMGB1P17-201ENST00000403495 ACAA1P09110 424 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P17-201ENST00000403495 IGHV4-30-4P0DP06 118 aa3.81□□□□□ -1.8
HMGB1P17-201ENST00000403495 MYOD1P15172 320 aa3.81□□□□□ -1.8
HMGB1P17-201ENST00000403495 ZNF12P17014 697 aa3.81□□□□□ -1.8
HMGB1P17-201ENST00000403495 UGT1A1P22309 533 aa3.81□□□□□ -1.8
HMGB1P17-201ENST00000403495 AZGP1P25311 298 aaKnown RBP3.81□□□□□ -1.8
HMGB1P17-201ENST00000403495 TERF1P54274 439 aa3.81□□□□□ -1.8
HMGB1P17-201ENST00000403495 RAD23AP54725 363 aa3.81□□□□□ -1.8
HMGB1P17-201ENST00000403495 RAD23BP54727 409 aa3.81□□□□□ -1.8
HMGB1P17-201ENST00000403495 LINC00205P59089 165 aa3.81□□□□□ -1.8
HMGB1P17-201ENST00000403495 PDE1BQ01064 536 aa3.81□□□□□ -1.8
HMGB1P17-201ENST00000403495 RALGDSQ12967 914 aa3.81□□□□□ -1.8
HMGB1P17-201ENST00000403495 MVPQ14764 893 aaKnown RBP3.81□□□□□ -1.8
HMGB1P17-201ENST00000403495 NFATC4Q14934 902 aa3.81□□□□□ -1.8
HMGB1P17-201ENST00000403495 OASLQ15646 514 aaKnown RBP3.81□□□□□ -1.8
HMGB1P17-201ENST00000403495 C15orf59Q2T9L4 293 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P17-201ENST00000403495 BRAT1Q6PJG6 821 aa3.81□□□□□ -1.8
HMGB1P17-201ENST00000403495 MCEMP1Q8IX19 187 aa3.81□□□□□ -1.8
HMGB1P17-201ENST00000403495 PM20D2Q8IYS1 436 aa3.81□□□□□ -1.8
HMGB1P17-201ENST00000403495 WFIKKN2Q8TEU8 576 aa3.81□□□□□ -1.8
HMGB1P17-201ENST00000403495 SLC20A1Q8WUM9 679 aa3.81□□□□□ -1.8
HMGB1P17-201ENST00000403495 MIB2Q96AX9 1013 aa3.81□□□□□ -1.8
HMGB1P17-201ENST00000403495 ZNF582Q96NG8 517 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P17-201ENST00000403495 MRPL1Q9BYD6 325 aaKnown RBP3.81□□□□□ -1.8
HMGB1P17-201ENST00000403495 GPR88Q9GZN0 384 aa3.81□□□□□ -1.8
HMGB1P17-201ENST00000403495 CSTL1Q9H114 145 aa3.81□□□□□ -1.8
HMGB1P17-201ENST00000403495 CNOT10Q9H9A5 744 aaKnown RBP3.81□□□□□ -1.8
HMGB1P17-201ENST00000403495 LRRC4Q9HBW1 653 aa3.81□□□□□ -1.8
HMGB1P17-201ENST00000403495 OLAHQ9NV23 265 aa3.81□□□□□ -1.8
HMGB1P17-201ENST00000403495 HIF1ANQ9NWT6 349 aa3.81□□□□□ -1.8
HMGB1P17-201ENST00000403495 MCM9Q9NXL9 1143 aa3.81□□□□□ -1.8
HMGB1P17-201ENST00000403495 WBP11Q9Y2W2 641 aaKnown RBP3.81□□□□□ -1.8
HMGB1P17-201ENST00000403495 A0A0U1RQJ8 604 aa3.8□□□□□ -1.8
HMGB1P17-201ENST00000403495 A0A1W2PP11 408 aa3.8□□□□□ -1.8
HMGB1P17-201ENST00000403495 SRRM3A6NNA2 597 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P17-201ENST00000403495 H0YIN7 160 aa3.8□□□□□ -1.8
HMGB1P17-201ENST00000403495 KCNN4O15554 427 aa3.8□□□□□ -1.8
HMGB1P17-201ENST00000403495 WISP2O76076 250 aa3.8□□□□□ -1.8
HMGB1P17-201ENST00000403495 TOMM70O94826 608 aa3.8□□□□□ -1.8
HMGB1P17-201ENST00000403495 TRUB2O95900 331 aaKnown RBP3.8□□□□□ -1.8
HMGB1P17-201ENST00000403495 VPREB1P12018 145 aa3.8□□□□□ -1.8
HMGB1P17-201ENST00000403495 ITGA2P17301 1181 aa3.8□□□□□ -1.8
HMGB1P17-201ENST00000403495 GJA1P17302 382 aa3.8□□□□□ -1.8
HMGB1P17-201ENST00000403495 S1PR1P21453 382 aa3.8□□□□□ -1.8
HMGB1P17-201ENST00000403495 SCP2P22307 547 aa3.8□□□□□ -1.8
HMGB1P17-201ENST00000403495 KCNA5P22460 613 aa3.8□□□□□ -1.8
HMGB1P17-201ENST00000403495 CDC25AP30304 524 aa3.8□□□□□ -1.8
HMGB1P17-201ENST00000403495 ARSEP51690 589 aa3.8□□□□□ -1.8
HMGB1P17-201ENST00000403495 CSE1LP55060 971 aaKnown RBP3.8□□□□□ -1.8
HMGB1P17-201ENST00000403495 HNRNPKP61978 463 aaKnown RBP eCLIP3.8□□□□□ -1.8
HMGB1P17-201ENST00000403495 SNRPEP62304 92 aaKnown RBP3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms