RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 TFAP2DQ7Z6R9 452 aa19.66■□□□□ 0.74
CCDC47-202ENST00000403162 SLC30A3Q99726 388 aa19.66■□□□□ 0.74
CCDC47-202ENST00000403162 BRINP2Q9C0B6 783 aa19.66■□□□□ 0.74
CCDC47-202ENST00000403162 ZYG11BQ9C0D3 744 aa19.66■□□□□ 0.74
CCDC47-202ENST00000403162 NMUR1Q9HB89 426 aa19.66■□□□□ 0.74
CCDC47-202ENST00000403162 NUDT5Q9UKK9 219 aa19.66■□□□□ 0.74
CCDC47-202ENST00000403162 TLR6Q9Y2C9 796 aa19.66■□□□□ 0.74
CCDC47-202ENST00000403162 ALPK3Q96L96 1907 aa19.65■□□□□ 0.74
CCDC47-202ENST00000403162 ABHD14A-ACY1A0A1B0GW23 586 aa19.65■□□□□ 0.74
CCDC47-202ENST00000403162 M0QZQ0 153 aa19.65■□□□□ 0.74
CCDC47-202ENST00000403162 RPP40O75818 363 aaKnown RBP19.65■□□□□ 0.74
CCDC47-202ENST00000403162 INHBBP09529 407 aa19.65■□□□□ 0.74
CCDC47-202ENST00000403162 HTR1EP28566 365 aa19.65■□□□□ 0.74
CCDC47-202ENST00000403162 NAA20P61599 178 aa19.65■□□□□ 0.74
CCDC47-202ENST00000403162 SEMA3AQ14563 771 aa19.65■□□□□ 0.74
CCDC47-202ENST00000403162 PAGE3Q5JUK9 113 aa19.65■□□□□ 0.74
CCDC47-202ENST00000403162 IFNEQ86WN2 208 aa19.65■□□□□ 0.74
CCDC47-202ENST00000403162 STAG3L4Q8TBR4 150 aa19.65■□□□□ 0.74
CCDC47-202ENST00000403162 MAGEE2Q8TD90 523 aaPredicted RBP19.65■□□□□ 0.74
CCDC47-202ENST00000403162 SNRNP27Q8WVK2 155 aaKnown RBP19.65■□□□□ 0.74
CCDC47-202ENST00000403162 VPS33AQ96AX1 596 aa19.65■□□□□ 0.74
CCDC47-202ENST00000403162 SLC39A13Q96H72 371 aa19.65■□□□□ 0.74
CCDC47-202ENST00000403162 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.65■□□□□ 0.74
CCDC47-202ENST00000403162 LEF1Q9UJU2 399 aaPredicted RBP19.65■□□□□ 0.74
CCDC47-202ENST00000403162 TTC3P53804 2025 aa19.65■□□□□ 0.74
CCDC47-202ENST00000403162 MICAL3Q7RTP6 2002 aa19.65■□□□□ 0.74
CCDC47-202ENST00000403162 TDRD15B5MCY1 1934 aaKnown RBP19.65■□□□□ 0.74
CCDC47-202ENST00000403162 A0A1B0GTL3 188 aa19.64■□□□□ 0.74
CCDC47-202ENST00000403162 A0A1W2PPW3 197 aa19.64■□□□□ 0.74
CCDC47-202ENST00000403162 CCDC162PA2VCL2 907 aa19.64■□□□□ 0.74
CCDC47-202ENST00000403162 TMX2-CTNND1H3BSU7 103 aa19.64■□□□□ 0.74
CCDC47-202ENST00000403162 HOXA2O43364 376 aa19.64■□□□□ 0.74
CCDC47-202ENST00000403162 CBFA2T3O75081 653 aa19.64■□□□□ 0.74
CCDC47-202ENST00000403162 B3GAT3O94766 335 aa19.64■□□□□ 0.74
CCDC47-202ENST00000403162 SNAP29O95721 258 aa19.64■□□□□ 0.74
CCDC47-202ENST00000403162 RPS17P08708 135 aaKnown RBP19.64■□□□□ 0.74
CCDC47-202ENST00000403162 NCK1P16333 377 aa19.64■□□□□ 0.74
CCDC47-202ENST00000403162 XKR7Q5GH72 579 aa19.64■□□□□ 0.74
CCDC47-202ENST00000403162 IL31Q6EBC2 164 aa19.64■□□□□ 0.74
CCDC47-202ENST00000403162 EFL1Q7Z2Z2 1120 aaKnown RBP19.64■□□□□ 0.74
CCDC47-202ENST00000403162 TRIM74Q86UV6 250 aa19.64■□□□□ 0.74
CCDC47-202ENST00000403162 TRIM73Q86UV7 250 aa19.64■□□□□ 0.74
CCDC47-202ENST00000403162 PROSER1Q86XN7 944 aa19.64■□□□□ 0.74
CCDC47-202ENST00000403162 ZNF280BQ86YH2 543 aa19.64■□□□□ 0.74
CCDC47-202ENST00000403162 KIAA2013Q8IYS2 634 aa19.64■□□□□ 0.74
CCDC47-202ENST00000403162 CRIPAKQ8N1N5 446 aa19.64■□□□□ 0.74
CCDC47-202ENST00000403162 PGBD5Q8N414 524 aa19.64■□□□□ 0.74
CCDC47-202ENST00000403162 FBXO39Q8N4B4 442 aa19.64■□□□□ 0.74
CCDC47-202ENST00000403162 BADQ92934 168 aa19.64■□□□□ 0.74
CCDC47-202ENST00000403162 PSMG2Q969U7 264 aa19.64■□□□□ 0.74
CCDC47-202ENST00000403162 ABHD8Q96I13 439 aa19.64■□□□□ 0.74
CCDC47-202ENST00000403162 VPS50Q96JG6 964 aa19.64■□□□□ 0.74
CCDC47-202ENST00000403162 TEX37Q96LM6 180 aa19.64■□□□□ 0.74
CCDC47-202ENST00000403162 CASD1Q96PB1 797 aa19.64■□□□□ 0.74
CCDC47-202ENST00000403162 FAM193BQ96PV7 902 aaPredicted RBP19.64■□□□□ 0.74
CCDC47-202ENST00000403162 DERL2Q9GZP9 239 aa19.64■□□□□ 0.74
CCDC47-202ENST00000403162 IL23AQ9NPF7 189 aa19.64■□□□□ 0.74
CCDC47-202ENST00000403162 RIMKLBQ9ULI2 386 aa19.64■□□□□ 0.74
CCDC47-202ENST00000403162 GBF1Q92538 1859 aa19.64■□□□□ 0.73
CCDC47-202ENST00000403162 A0A1W2PQH9 124 aa19.64■□□□□ 0.73
CCDC47-202ENST00000403162 SUPT3HB4E1H0 165 aa19.64■□□□□ 0.73
CCDC47-202ENST00000403162 SUPT3HO75486 399 aa19.64■□□□□ 0.73
CCDC47-202ENST00000403162 NPPAP01160 153 aa19.64■□□□□ 0.73
CCDC47-202ENST00000403162 TSPY1Q01534 308 aa19.64■□□□□ 0.73
CCDC47-202ENST00000403162 TYSND1Q2T9J0 566 aa19.64■□□□□ 0.73
CCDC47-202ENST00000403162 PAN2Q504Q3 1202 aaKnown RBP19.64■□□□□ 0.73
CCDC47-202ENST00000403162 FGD3Q5JSP0 725 aa19.64■□□□□ 0.73
CCDC47-202ENST00000403162 ANKS6Q68DC2 871 aa19.64■□□□□ 0.73
CCDC47-202ENST00000403162 OVOS1Q6IE37 1185 aa19.64■□□□□ 0.73
CCDC47-202ENST00000403162 FAM117BQ6P1L5 589 aa19.64■□□□□ 0.73
CCDC47-202ENST00000403162 CD300LGQ6UXG3 332 aa19.64■□□□□ 0.73
CCDC47-202ENST00000403162 GIPC3Q8TF64 312 aa19.64■□□□□ 0.73
CCDC47-202ENST00000403162 ZNF599Q96NL3 588 aa19.64■□□□□ 0.73
CCDC47-202ENST00000403162 HTATIP2Q9BUP3 242 aa19.64■□□□□ 0.73
CCDC47-202ENST00000403162 BDH2Q9BUT1 245 aa19.64■□□□□ 0.73
CCDC47-202ENST00000403162 SYTL2Q9HCH5 934 aa19.64■□□□□ 0.73
CCDC47-202ENST00000403162 CATSPERZQ9NTU4 200 aa19.64■□□□□ 0.73
CCDC47-202ENST00000403162 TMEM45AQ9NWC5 275 aa19.64■□□□□ 0.73
CCDC47-202ENST00000403162 RNF112Q9ULX5 631 aa19.64■□□□□ 0.73
CCDC47-202ENST00000403162 ARL5AQ9Y689 179 aa19.64■□□□□ 0.73
CCDC47-202ENST00000403162 CCDC154A6NI56 674 aa19.63■□□□□ 0.73
CCDC47-202ENST00000403162 CRCPO75575 148 aa19.63■□□□□ 0.73
CCDC47-202ENST00000403162 BAIAP3O94812 1187 aa19.63■□□□□ 0.73
CCDC47-202ENST00000403162 FGF1P05230 155 aa19.63■□□□□ 0.73
CCDC47-202ENST00000403162 HLA-DPA1P20036 260 aa19.63■□□□□ 0.73
CCDC47-202ENST00000403162 GRIK1P39086 918 aa19.63■□□□□ 0.73
CCDC47-202ENST00000403162 STC1P52823 247 aa19.63■□□□□ 0.73
CCDC47-202ENST00000403162 ANKDD1AQ495B1 522 aa19.63■□□□□ 0.73
CCDC47-202ENST00000403162 PDCD4Q53EL6 469 aaKnown RBP19.63■□□□□ 0.73
CCDC47-202ENST00000403162 SPATA2LQ8IUW3 424 aaPredicted RBP19.63■□□□□ 0.73
CCDC47-202ENST00000403162 THEM5Q8N1Q8 247 aa19.63■□□□□ 0.73
CCDC47-202ENST00000403162 BPIFB1Q8TDL5 484 aa19.63■□□□□ 0.73
CCDC47-202ENST00000403162 UROC1Q96N76 676 aa19.63■□□□□ 0.73
CCDC47-202ENST00000403162 C1QTNF3Q9BXJ4 246 aa19.63■□□□□ 0.73
CCDC47-202ENST00000403162 PAIP1Q9H074 479 aaKnown RBP19.63■□□□□ 0.73
CCDC47-202ENST00000403162 IFT80Q9P2H3 777 aaPredicted RBP19.63■□□□□ 0.73
CCDC47-202ENST00000403162 TBKBP1A7MCY6 615 aa19.63■□□□□ 0.73
CCDC47-202ENST00000403162 B4GALT3O60512 393 aa19.63■□□□□ 0.73
CCDC47-202ENST00000403162 SLC22A3O75751 556 aa19.63■□□□□ 0.73
CCDC47-202ENST00000403162 JUNBP17275 347 aaPredicted RBP19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms