RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 SPINT3P49223 89 aa12.13□□□□□ -0.47
CLIP4-203ENST00000401617 SLC25A3Q00325 362 aa12.13□□□□□ -0.47
CLIP4-203ENST00000401617 CLCQ05315 142 aa12.13□□□□□ -0.47
CLIP4-203ENST00000401617 LCP2Q13094 533 aa12.13□□□□□ -0.47
CLIP4-203ENST00000401617 GPRC6AQ5T6X5 926 aa12.13□□□□□ -0.47
CLIP4-203ENST00000401617 NXNQ6DKJ4 435 aa12.13□□□□□ -0.47
CLIP4-203ENST00000401617 LARP4Q71RC2 724 aaKnown RBP eCLIP12.13□□□□□ -0.47
CLIP4-203ENST00000401617 NET1Q7Z628 596 aaPredicted RBP12.13□□□□□ -0.47
CLIP4-203ENST00000401617 ETFBKMTQ8IXQ9 262 aa12.13□□□□□ -0.47
CLIP4-203ENST00000401617 LKAAEAR1Q8TD35 194 aa12.13□□□□□ -0.47
CLIP4-203ENST00000401617 DTX3LQ8TDB6 740 aa12.13□□□□□ -0.47
CLIP4-203ENST00000401617 HCAR2Q8TDS4 363 aa12.13□□□□□ -0.47
CLIP4-203ENST00000401617 WDR60Q8WVS4 1066 aa12.13□□□□□ -0.47
CLIP4-203ENST00000401617 THTPAQ9BU02 230 aa12.13□□□□□ -0.47
CLIP4-203ENST00000401617 ZDHHC3Q9NYG2 299 aa12.13□□□□□ -0.47
CLIP4-203ENST00000401617 CRLS1Q9UJA2 301 aa12.13□□□□□ -0.47
CLIP4-203ENST00000401617 PCTPQ9UKL6 214 aa12.13□□□□□ -0.47
CLIP4-203ENST00000401617 LOC100653049A0A140TA62 436 aa12.12□□□□□ -0.47
CLIP4-203ENST00000401617 MEI4A8MW99 385 aa12.12□□□□□ -0.47
CLIP4-203ENST00000401617 TTC34A8MYJ7 566 aa12.12□□□□□ -0.47
CLIP4-203ENST00000401617 AZIN1O14977 448 aa12.12□□□□□ -0.47
CLIP4-203ENST00000401617 KRT34O76011 436 aa12.12□□□□□ -0.47
CLIP4-203ENST00000401617 LMNAP02545 664 aaKnown RBP12.12□□□□□ -0.47
CLIP4-203ENST00000401617 ZNF30P17039 623 aa12.12□□□□□ -0.47
CLIP4-203ENST00000401617 RECQLP46063 649 aaPredicted RBP12.12□□□□□ -0.47
CLIP4-203ENST00000401617 MXRA7P84157 204 aa12.12□□□□□ -0.47
CLIP4-203ENST00000401617 SEMG2Q02383 582 aa12.12□□□□□ -0.47
CLIP4-203ENST00000401617 KPNB1Q14974 876 aaKnown RBP12.12□□□□□ -0.47
CLIP4-203ENST00000401617 CRY1Q16526 586 aa12.12□□□□□ -0.47
CLIP4-203ENST00000401617 KHDC1Q4VXA5 237 aaKnown RBP12.12□□□□□ -0.47
CLIP4-203ENST00000401617 ACSBG2Q5FVE4 666 aa12.12□□□□□ -0.47
CLIP4-203ENST00000401617 KANK2Q63ZY3 851 aa12.12□□□□□ -0.47
CLIP4-203ENST00000401617 CLEC6AQ6EIG7 209 aa12.12□□□□□ -0.47
CLIP4-203ENST00000401617 SBSNQ6UWP8 590 aa12.12□□□□□ -0.47
CLIP4-203ENST00000401617 VN1R2Q8NFZ6 395 aa12.12□□□□□ -0.47
CLIP4-203ENST00000401617 CYB5D2Q8WUJ1 264 aa12.12□□□□□ -0.47
CLIP4-203ENST00000401617 SORCS1Q8WY21 1168 aa12.12□□□□□ -0.47
CLIP4-203ENST00000401617 ASIC4Q96FT7 647 aa12.12□□□□□ -0.47
CLIP4-203ENST00000401617 LRIG1Q96JA1 1093 aa12.12□□□□□ -0.47
CLIP4-203ENST00000401617 ASB16Q96NS5 453 aa12.12□□□□□ -0.47
CLIP4-203ENST00000401617 LMAN2LQ9H0V9 348 aa12.12□□□□□ -0.47
CLIP4-203ENST00000401617 NUDT4Q9NZJ9 180 aa12.12□□□□□ -0.47
CLIP4-203ENST00000401617 DKK3Q9UBP4 350 aa12.12□□□□□ -0.47
CLIP4-203ENST00000401617 NKX1-2Q9UD57 310 aaPredicted RBP12.12□□□□□ -0.47
CLIP4-203ENST00000401617 SLC7A8Q9UHI5 535 aa12.12□□□□□ -0.47
CLIP4-203ENST00000401617 L3MBTL1Q9Y468 752 aa12.12□□□□□ -0.47
CLIP4-203ENST00000401617 DNAJC15Q9Y5T4 150 aa12.12□□□□□ -0.47
CLIP4-203ENST00000401617 CCNT2O60583 730 aaKnown RBP12.12□□□□□ -0.47
CLIP4-203ENST00000401617 SLC25A14O95258 325 aaPredicted RBP12.12□□□□□ -0.47
CLIP4-203ENST00000401617 ADH1CP00326 375 aa12.12□□□□□ -0.47
CLIP4-203ENST00000401617 TIMP2P16035 220 aa12.12□□□□□ -0.47
CLIP4-203ENST00000401617 NNMTP40261 264 aa12.12□□□□□ -0.47
CLIP4-203ENST00000401617 NSG1P42857 185 aa12.12□□□□□ -0.47
CLIP4-203ENST00000401617 DGKGP49619 791 aa12.12□□□□□ -0.47
CLIP4-203ENST00000401617 PTK2BQ14289 1009 aa12.12□□□□□ -0.47
CLIP4-203ENST00000401617 SHHQ15465 462 aa12.12□□□□□ -0.47
CLIP4-203ENST00000401617 TGFBIQ15582 683 aa12.12□□□□□ -0.47
CLIP4-203ENST00000401617 GAB4Q2WGN9 574 aa12.12□□□□□ -0.47
CLIP4-203ENST00000401617 RFLNAQ6ZTI6 216 aa12.12□□□□□ -0.47
CLIP4-203ENST00000401617 ADAMTSL2Q86TH1 951 aa12.12□□□□□ -0.47
CLIP4-203ENST00000401617 C12orf40Q86WS4 652 aa12.12□□□□□ -0.47
CLIP4-203ENST00000401617 NPAS3Q8IXF0 933 aa12.12□□□□□ -0.47
CLIP4-203ENST00000401617 CLDN19Q8N6F1 224 aa12.12□□□□□ -0.47
CLIP4-203ENST00000401617 TRPC4APQ8TEL6 797 aa12.12□□□□□ -0.47
CLIP4-203ENST00000401617 FAM161BQ96MY7 647 aa12.12□□□□□ -0.47
CLIP4-203ENST00000401617 DCLRE1BQ9H816 532 aa12.12□□□□□ -0.47
CLIP4-203ENST00000401617 SFXN1Q9H9B4 322 aa12.12□□□□□ -0.47
CLIP4-203ENST00000401617 SARS2Q9NP81 518 aaKnown RBP12.12□□□□□ -0.47
CLIP4-203ENST00000401617 MID1IP1Q9NPA3 183 aa12.12□□□□□ -0.47
CLIP4-203ENST00000401617 NFKBIL1Q9UBC1 381 aaPredicted RBP12.12□□□□□ -0.47
CLIP4-203ENST00000401617 TMPRSS11EQ9UL52 423 aa12.12□□□□□ -0.47
CLIP4-203ENST00000401617 FIS1Q9Y3D6 152 aa12.12□□□□□ -0.47
CLIP4-203ENST00000401617 MUC22E2RYF6 1773 aaPredicted RBP12.11□□□□□ -0.47
CLIP4-203ENST00000401617 DOCK8Q8NF50 2099 aa12.11□□□□□ -0.47
CLIP4-203ENST00000401617 LEFTY1O75610 366 aa12.11□□□□□ -0.47
CLIP4-203ENST00000401617 CTSLP07711 333 aa12.11□□□□□ -0.47
CLIP4-203ENST00000401617 CYP2A6P11509 494 aaPredicted RBP12.11□□□□□ -0.47
CLIP4-203ENST00000401617 DGKAP23743 735 aa12.11□□□□□ -0.47
CLIP4-203ENST00000401617 VIPR1P32241 457 aa12.11□□□□□ -0.47
CLIP4-203ENST00000401617 VIPR2P41587 438 aa12.11□□□□□ -0.47
CLIP4-203ENST00000401617 RGS4P49798 205 aa12.11□□□□□ -0.47
CLIP4-203ENST00000401617 AGTR2P50052 363 aa12.11□□□□□ -0.47
CLIP4-203ENST00000401617 ATP4BP51164 291 aa12.11□□□□□ -0.47
CLIP4-203ENST00000401617 DCDC1P59894 354 aa12.11□□□□□ -0.47
CLIP4-203ENST00000401617 B4GALNT1Q00973 533 aa12.11□□□□□ -0.47
CLIP4-203ENST00000401617 CDC16Q13042 620 aa12.11□□□□□ -0.47
CLIP4-203ENST00000401617 CYLC2Q14093 348 aaPredicted RBP12.11□□□□□ -0.47
CLIP4-203ENST00000401617 PCBP2Q15366 365 aaKnown RBP eCLIP12.11□□□□□ -0.47
CLIP4-203ENST00000401617 PPP1R3AQ16821 1122 aa12.11□□□□□ -0.47
CLIP4-203ENST00000401617 TRMT5Q32P41 509 aaKnown RBP12.11□□□□□ -0.47
CLIP4-203ENST00000401617 ATP13A5Q4VNC0 1218 aa12.11□□□□□ -0.47
CLIP4-203ENST00000401617 TCEAL5Q5H9L2 206 aa12.11□□□□□ -0.47
CLIP4-203ENST00000401617 FAM78AQ5JUQ0 283 aa12.11□□□□□ -0.47
CLIP4-203ENST00000401617 TRIM68Q6AZZ1 485 aa12.11□□□□□ -0.47
CLIP4-203ENST00000401617 TMC5Q6UXY8 1006 aa12.11□□□□□ -0.47
CLIP4-203ENST00000401617 SNX32Q86XE0 403 aa12.11□□□□□ -0.47
CLIP4-203ENST00000401617 HMGCLL1Q8TB92 370 aa12.11□□□□□ -0.47
CLIP4-203ENST00000401617 PBXIP1Q96AQ6 731 aa12.11□□□□□ -0.47
CLIP4-203ENST00000401617 ULK4Q96C45 1275 aa12.11□□□□□ -0.47
CLIP4-203ENST00000401617 C19orf60Q96EN9 201 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms