RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 TRMT10CQ7L0Y3 403 aaKnown RBP7.43□□□□□ -1.22
USP16-204ENST00000399976 CILP2Q8IUL8 1156 aa7.43□□□□□ -1.22
USP16-204ENST00000399976 ARL10Q8N8L6 244 aa7.43□□□□□ -1.22
USP16-204ENST00000399976 SH3KBP1Q96B97 665 aa7.43□□□□□ -1.22
USP16-204ENST00000399976 HINFPQ9BQA5 517 aa7.43□□□□□ -1.22
USP16-204ENST00000399976 TXLNGYQ9BZA5 131 aa7.43□□□□□ -1.22
USP16-204ENST00000399976 ASB8Q9H765 288 aa7.43□□□□□ -1.22
USP16-204ENST00000399976 FGF22Q9HCT0 170 aa7.43□□□□□ -1.22
USP16-204ENST00000399976 SARS2Q9NP81 518 aaKnown RBP7.43□□□□□ -1.22
USP16-204ENST00000399976 ATXN10Q9UBB4 475 aa7.43□□□□□ -1.22
USP16-204ENST00000399976 APOBEC3BQ9UH17 382 aaKnown RBP7.43□□□□□ -1.22
USP16-204ENST00000399976 GNPTGQ9UJJ9 305 aa7.43□□□□□ -1.22
USP16-204ENST00000399976 CCDC162PA2VCL2 907 aa7.42□□□□□ -1.22
USP16-204ENST00000399976 MGAT4DA6NG13 374 aa7.42□□□□□ -1.22
USP16-204ENST00000399976 LILRA5A6NI73 299 aa7.42□□□□□ -1.22
USP16-204ENST00000399976 K7ESM1 405 aa7.42□□□□□ -1.22
USP16-204ENST00000399976 CD3EAPO15446 510 aaKnown RBP7.42□□□□□ -1.22
USP16-204ENST00000399976 GRID2O43424 1007 aa7.42□□□□□ -1.22
USP16-204ENST00000399976 TNFSF14O43557 240 aa7.42□□□□□ -1.22
USP16-204ENST00000399976 SLU7O95391 586 aaKnown RBP7.42□□□□□ -1.22
USP16-204ENST00000399976 GOT2P00505 430 aaKnown RBP7.42□□□□□ -1.22
USP16-204ENST00000399976 CFIP05156 583 aa7.42□□□□□ -1.22
USP16-204ENST00000399976 MSH3P20585 1137 aa7.42□□□□□ -1.22
USP16-204ENST00000399976 ECHS1P30084 290 aa7.42□□□□□ -1.22
USP16-204ENST00000399976 PRAMEP78395 509 aa7.42□□□□□ -1.22
USP16-204ENST00000399976 E2F1Q01094 437 aa7.42□□□□□ -1.22
USP16-204ENST00000399976 DHX9Q08211 1270 aaKnown RBP7.42□□□□□ -1.22
USP16-204ENST00000399976 ILF3Q12906 894 aaKnown RBP eCLIP7.42□□□□□ -1.22
USP16-204ENST00000399976 SPARCL1Q14515 664 aa7.42□□□□□ -1.22
USP16-204ENST00000399976 POU6F1Q14863 301 aa7.42□□□□□ -1.22
USP16-204ENST00000399976 PSAPL1Q6NUJ1 521 aa7.42□□□□□ -1.22
USP16-204ENST00000399976 IGF2-ASQ6U949 168 aa7.42□□□□□ -1.22
USP16-204ENST00000399976 NAXDQ8IW45 347 aa7.42□□□□□ -1.22
USP16-204ENST00000399976 OR13C4Q8NGS5 318 aa7.42□□□□□ -1.22
USP16-204ENST00000399976 OR1E3Q8WZA6 343 aa7.42□□□□□ -1.22
USP16-204ENST00000399976 KCNJ9Q92806 393 aa7.42□□□□□ -1.22
USP16-204ENST00000399976 TRIM51Q9BSJ1 452 aa7.42□□□□□ -1.22
USP16-204ENST00000399976 LRRC1Q9BTT6 524 aa7.42□□□□□ -1.22
USP16-204ENST00000399976 MIR1-1HGQ9H1L0 117 aa7.42□□□□□ -1.22
USP16-204ENST00000399976 POT1Q9NUX5 634 aa7.42□□□□□ -1.22
USP16-204ENST00000399976 FAM86C1Q9NVL1 165 aa7.42□□□□□ -1.22
USP16-204ENST00000399976 CRLS1Q9UJA2 301 aa7.42□□□□□ -1.22
USP16-204ENST00000399976 FAM47DPA6NHR8 397 aa7.42□□□□□ -1.22
USP16-204ENST00000399976 NUDT21O43809 227 aaKnown RBP7.42□□□□□ -1.22
USP16-204ENST00000399976 USP12O75317 370 aa7.42□□□□□ -1.22
USP16-204ENST00000399976 PRKCGP05129 697 aa7.42□□□□□ -1.22
USP16-204ENST00000399976 OR56A5P0C7T3 313 aa7.42□□□□□ -1.22
USP16-204ENST00000399976 JUNDP17535 347 aa7.42□□□□□ -1.22
USP16-204ENST00000399976 CNTFP26441 200 aa7.42□□□□□ -1.22
USP16-204ENST00000399976 SLC26A3P40879 764 aa7.42□□□□□ -1.22
USP16-204ENST00000399976 GRIA1P42261 906 aa7.42□□□□□ -1.22
USP16-204ENST00000399976 ATXN3P54252 364 aaPredicted RBP7.42□□□□□ -1.22
USP16-204ENST00000399976 PUM1Q14671 1186 aaKnown RBP eCLIP7.42□□□□□ -1.22
USP16-204ENST00000399976 DBN1Q16643 649 aa7.42□□□□□ -1.22
USP16-204ENST00000399976 LRRC73Q5JTD7 316 aa7.42□□□□□ -1.22
USP16-204ENST00000399976 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.42□□□□□ -1.22
USP16-204ENST00000399976 METRNLQ641Q3 311 aa7.42□□□□□ -1.22
USP16-204ENST00000399976 ARMCX6Q7L4S7 300 aa7.42□□□□□ -1.22
USP16-204ENST00000399976 LCA5Q86VQ0 697 aa7.42□□□□□ -1.22
USP16-204ENST00000399976 NRROSQ86YC3 692 aa7.42□□□□□ -1.22
USP16-204ENST00000399976 AGGF1Q8N302 714 aaeCLIP7.42□□□□□ -1.22
USP16-204ENST00000399976 LPGAT1Q92604 370 aa7.42□□□□□ -1.22
USP16-204ENST00000399976 SCAMP4Q969E2 229 aa7.42□□□□□ -1.22
USP16-204ENST00000399976 CERS2Q96G23 380 aa7.42□□□□□ -1.22
USP16-204ENST00000399976 DCUN1D1Q96GG9 259 aa7.42□□□□□ -1.22
USP16-204ENST00000399976 AGAP2Q99490 1192 aa7.42□□□□□ -1.22
USP16-204ENST00000399976 SUFUQ9UMX1 484 aa7.42□□□□□ -1.22
USP16-204ENST00000399976 OAS3Q9Y6K5 1087 aaKnown RBP7.42□□□□□ -1.22
USP16-204ENST00000399976 PTPRBP23467 1997 aa7.42□□□□□ -1.22
USP16-204ENST00000399976 ATXN2Q99700 1313 aaKnown RBP7.41□□□□□ -1.22
USP16-204ENST00000399976 TMEM202A6NGA9 273 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 FAM159BA6NKW6 160 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 TMX2-CTNND1H3BSU7 103 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 PRMT5O14744 637 aaPredicted RBP7.41□□□□□ -1.22
USP16-204ENST00000399976 KDM1AO60341 852 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 C1QAP02745 245 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 MPC1LP0DKB6 136 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 PHBP35232 272 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 SKIV2L2P42285 1042 aaKnown RBP7.41□□□□□ -1.22
USP16-204ENST00000399976 CLDN2P57739 230 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 B4GALNT1Q00973 533 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 MGAT5Q09328 741 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 HLTFQ14527 1009 aaKnown RBP eCLIP7.41□□□□□ -1.22
USP16-204ENST00000399976 TPRG1LQ5T0D9 272 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 FNBP1LQ5T0N5 605 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 ENPP7Q6UWV6 458 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 FAM151BQ6UXP7 276 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 UNC5DQ6UXZ4 953 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 SERPINA9Q86WD7 417 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 HDAC10Q969S8 669 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 ISL2Q96A47 359 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 PDLIM5Q96HC4 596 aaKnown RBP7.41□□□□□ -1.22
USP16-204ENST00000399976 LGR4Q9BXB1 951 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.41□□□□□ -1.22
USP16-204ENST00000399976 CHRNA10Q9GZZ6 450 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 PLAC1Q9HBJ0 212 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 CHRAC1Q9NRG0 131 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 SEMA5BQ9P283 1151 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 ZNF180Q9UJW8 692 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 SLCO1B1Q9Y6L6 691 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms