RNA–Protein interactions for RNA: ENST00000399668.6

KNL1-202, Transcript of kinetochore scaffold 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KNL1, Length 7,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-202ENST00000399668 MSRAQ9UJ68 235 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 GMPPBQ9Y5P6 360 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 C15orf38-AP3S2A0A0A6YYH1 394 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 SLC28A1O00337 649 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 PRMT5O14744 637 aaPredicted RBP3.23□□□□□ -1.89
KNL1-202ENST00000399668 MYL12BO14950 172 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 SEPT4O43236 478 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 SLC25A12O75746 678 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 MED26O95402 600 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 METTL18O95568 372 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 GJA1P17302 382 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 TCEA1P23193 301 aaKnown RBP3.23□□□□□ -1.89
KNL1-202ENST00000399668 MAT2AP31153 395 aaKnown RBP3.23□□□□□ -1.89
KNL1-202ENST00000399668 POLR2JP52435 117 aaKnown RBP3.23□□□□□ -1.89
KNL1-202ENST00000399668 JAG1P78504 1218 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 PTSQ03393 145 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 ARHGAP1Q07960 439 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 COX10Q12887 443 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 BIKQ13323 160 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 NAE1Q13564 534 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 CHADLQ6NUI6 762 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 ARPINQ7Z6K5 226 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 RAVER1Q8IY67 606 aaKnown RBP3.23□□□□□ -1.89
KNL1-202ENST00000399668 CPNE9Q8IYJ1 553 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 CACTIN-AS1Q8N1I8 211 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 NAT8LQ8N9F0 302 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 KLHL23Q8NBE8 558 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 ZNF540Q8NDQ6 660 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 OR14C36Q8NHC7 312 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 OR8D1Q8WZ84 308 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 CENPIQ92674 756 aaPredicted RBP3.23□□□□□ -1.89
KNL1-202ENST00000399668 DTNBP1Q96EV8 351 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 BTBD9Q96Q07 612 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 COPS8Q99627 209 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 ADI1Q9BV57 179 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 OSBPL6Q9BZF3 934 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 FAM192AQ9GZU8 254 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 LRMDAQ9H2I8 198 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 MFSD1Q9H3U5 465 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 TXNRD2Q9NNW7 524 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 HMG20AQ9NP66 347 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 PIGVQ9NUD9 493 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 GRHL1Q9NZI5 618 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 VPS51Q9UID3 782 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 C3orf18Q9UK00 162 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 ARIH1Q9Y4X5 557 aaPredicted RBP3.23□□□□□ -1.89
KNL1-202ENST00000399668 OTOGLQ3ZCN5 2332 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 PRRC2CQ9Y520 2896 aaKnown RBP3.23□□□□□ -1.89
KNL1-202ENST00000399668 GLTPD2A6NH11 291 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 FAM47E-STBD1D6RA91 191 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 H3BM21 787 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 ATG13O75143 517 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 RNASEH2AO75792 299 aaKnown RBP3.23□□□□□ -1.89
KNL1-202ENST00000399668 GLUD1P00367 558 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 SLC35G4P0C7Q5 338 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 GRIA1P42261 906 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 GSTM5P46439 218 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 CASP9P55211 416 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 RAB14P61106 215 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 SKP1P63208 163 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 SULT2A1Q06520 285 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 CDK18Q07002 472 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 GTF2H2Q13888 395 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 GNA13Q14344 377 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 CYP1B1Q16678 543 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 SOWAHAQ2M3V2 549 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 KLHL12Q53G59 568 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 INO80DQ53TQ3 878 aaPredicted RBP3.23□□□□□ -1.89
KNL1-202ENST00000399668 ZNF57Q68EA5 555 aaPredicted RBP3.23□□□□□ -1.89
KNL1-202ENST00000399668 GTF2H2CQ6P1K8 395 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 TRIM40Q6P9F5 258 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 PRSS55Q6UWB4 352 aaPredicted RBP3.23□□□□□ -1.89
KNL1-202ENST00000399668 CUZD1Q86UP6 607 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 PIM3Q86V86 326 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 SVOPQ8N4V2 548 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 RP9Q8TA86 221 aaKnown RBP3.23□□□□□ -1.89
KNL1-202ENST00000399668 STARD8Q92502 1023 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 NELL1Q92832 810 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 SCLYQ96I15 445 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 PLEKHG4BQ96PX9 1271 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 SH3GL2Q99962 352 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 RTKNQ9BST9 563 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 OSBPL7Q9BZF2 842 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 SLC39A8Q9C0K1 460 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 RASSF1Q9NS23 344 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 KLHL3Q9UH77 587 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 CDH22Q9UJ99 828 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 TMCO1Q9UM00 188 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 PRPF19Q9UMS4 504 aaKnown RBP3.23□□□□□ -1.89
KNL1-202ENST00000399668 PSMD13Q9UNM6 376 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 MAP4K5Q9Y4K4 846 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 PRUNE2Q8WUY3 3088 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 A0A1W2PRU2 124 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 CAPN8A6NHC0 703 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 C1QTNF3-AMACRE9PGA6 284 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 GTPBP1O00178 669 aaKnown RBP3.23□□□□□ -1.89
KNL1-202ENST00000399668 MATN3O15232 486 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 ACSL4O60488 711 aa3.23□□□□□ -1.89
KNL1-202ENST00000399668 SHOX2O60902 331 aaPredicted RBP3.23□□□□□ -1.89
KNL1-202ENST00000399668 CAPN15O75808 1086 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms