RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 SATL1Q86VE3 508 aa10.89□□□□□ -0.67
CACNA1C-216ENST00000399638 ZNF398Q8TD17 642 aa10.89□□□□□ -0.67
CACNA1C-216ENST00000399638 SH3RF2Q8TEC5 729 aa10.89□□□□□ -0.67
CACNA1C-216ENST00000399638 CIDECQ96AQ7 238 aaPredicted RBP10.89□□□□□ -0.67
CACNA1C-216ENST00000399638 RPL10LQ96L21 214 aaKnown RBP10.89□□□□□ -0.67
CACNA1C-216ENST00000399638 C1QTNF1Q9BXJ1 281 aa10.89□□□□□ -0.67
CACNA1C-216ENST00000399638 ZNF350Q9GZX5 532 aa10.89□□□□□ -0.67
CACNA1C-216ENST00000399638 UNC93B1Q9H1C4 597 aa10.89□□□□□ -0.67
CACNA1C-216ENST00000399638 SEMA6AQ9H2E6 1030 aa10.89□□□□□ -0.67
CACNA1C-216ENST00000399638 MRPS30Q9NP92 439 aaKnown RBP10.89□□□□□ -0.67
CACNA1C-216ENST00000399638 GLYATL1P3A0A0U1RQE8 302 aa10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 CIB4A0PJX0 185 aa10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 SAGP10523 405 aaPredicted RBP10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 MAPTP10636 758 aaKnown RBP10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 DDX6P26196 483 aaKnown RBP eCLIP10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 PTPN4P29074 926 aa10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 OTX2P32243 289 aa10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 SLC6A9P48067 706 aa10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 MCL1Q07820 350 aa10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 TAPT1Q6NXT6 567 aa10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 TRIM40Q6P9F5 258 aa10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 ZPBP2Q6X784 338 aa10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 MAP3K3Q99759 626 aa10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 CHID1Q9BWS9 393 aa10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 ANKHQ9HCJ1 492 aa10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 ZNF224Q9NZL3 707 aa10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 WASF2Q9Y6W5 498 aa10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 GRIN2DO15399 1336 aa10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 PECAM1P16284 738 aaPredicted RBP10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 ZNF268Q14587 947 aaPredicted RBP10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 LPCAT2Q7L5N7 544 aa10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 VANGL1Q8TAA9 524 aaPredicted RBP10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 JPH3Q8WXH2 748 aaPredicted RBP10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 ZNF607Q96SK3 696 aa10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 UBE2QL1A1L167 161 aa10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 LSM1O15116 133 aaKnown RBP10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 HCAR3P49019 387 aa10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 MECP2P51608 486 aaKnown RBP10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 FAM35AQ86V20 835 aa10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 ZMIZ2Q8NF64 920 aa10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 STK32AQ8WU08 396 aa10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 ZNF296Q8WUU4 475 aaPredicted RBP10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 KLHL6Q8WZ60 621 aa10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 EBNA1BP2Q99848 306 aaKnown RBP10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 NIFKQ9BYG3 293 aaKnown RBP10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 PTGFRNQ9P2B2 879 aa10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 PLCL2Q9UPR0 1127 aa10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 TMEM131LA2VDJ0 1609 aa10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 C5orf60A6NFR6 353 aa10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 USP2O75604 605 aaPredicted RBP10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 COL6A1P12109 1028 aa10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 CNTFP26441 200 aa10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 ACLYP53396 1101 aa10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 FKBP1AP62942 108 aaKnown RBP10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 TRAF3Q13114 568 aa10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 NOXRED1Q6NXP6 359 aa10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 RBFAQ8N0V3 343 aa10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 POF1BQ8WVV4 589 aa10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 SLC25A36Q96CQ1 311 aa10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 CPNE1Q99829 537 aa10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 TMEM216Q9P0N5 145 aa10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 CYTH4Q9UIA0 394 aa10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 HACD1B0YJ81 288 aa10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 ZNF823P16415 610 aa10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 GNB3P16520 340 aa10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 ZNF16P17020 682 aaPredicted RBP10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 DNAJA1P31689 397 aaKnown RBP10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 CTBP2P56545 445 aa10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 NFKB2Q00653 900 aa10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 DUSP28Q4G0W2 176 aa10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 FAM183BPQ6ZVS7 135 aa10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 ZNF720Q7Z2F6 126 aa10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 NKAPQ8N5F7 415 aaKnown RBP10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 CENPIQ92674 756 aaPredicted RBP10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 KAT5Q92993 513 aa10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 CD101Q93033 1021 aa10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 KLHDC7BQ96G42 594 aa10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 NSMCE2Q96MF7 247 aa10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 NDNQ99608 321 aa10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 OSBPL11Q9BXB4 747 aa10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 LRMDAQ9H2I8 198 aa10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 CCDC86Q9H6F5 360 aaKnown RBP10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 HEY2Q9UBP5 337 aa10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 SRRDQ9UH36 339 aa10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 EDARQ9UNE0 448 aa10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 PADI2Q9Y2J8 665 aa10.88□□□□□ -0.67
CACNA1C-216ENST00000399638 IQCF5A8MTL0 148 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 ATP9AO75110 1047 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 FKBP6O75344 327 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 RBPJQ06330 500 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 HFE2Q6ZVN8 426 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 MON1AQ86VX9 555 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 FOXRED2Q8IWF2 684 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 CELF5Q8N6W0 485 aaKnown RBP10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 EXOSC8Q96B26 276 aaKnown RBP10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 NUS1Q96E22 293 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 TEKT5Q96M29 485 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 TMEM79Q9BSE2 394 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 TBL1XR1Q9BZK7 514 aa10.87□□□□□ -0.67
CACNA1C-216ENST00000399638 NMUR1Q9HB89 426 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms