RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 NLE1Q9NVX2 485 aaPredicted RBP16.46■□□□□ 0.23
APTR-201ENST00000398043 PIH1D1Q9NWS0 290 aaKnown RBP16.46■□□□□ 0.23
APTR-201ENST00000398043 SCHIP1Q9P0W5 487 aaPredicted RBP16.46■□□□□ 0.23
APTR-201ENST00000398043 ATXN7L1Q9ULK2 861 aaPredicted RBP16.46■□□□□ 0.23
APTR-201ENST00000398043 TTC7AQ9ULT0 858 aaPredicted RBP16.46■□□□□ 0.23
APTR-201ENST00000398043 CFAP47Q6ZTR5 3102 aa16.45■□□□□ 0.22
APTR-201ENST00000398043 TRBV5-4A0A0C4DH59 114 aa16.45■□□□□ 0.22
APTR-201ENST00000398043 PMS2P1A4D2B8 440 aa16.45■□□□□ 0.22
APTR-201ENST00000398043 TLX3O43711 291 aaPredicted RBP16.45■□□□□ 0.22
APTR-201ENST00000398043 SGTAO43765 313 aa16.45■□□□□ 0.22
APTR-201ENST00000398043 BRINP1O60477 761 aa16.45■□□□□ 0.22
APTR-201ENST00000398043 MPOP05164 745 aa16.45■□□□□ 0.22
APTR-201ENST00000398043 CD1CP29017 333 aa16.45■□□□□ 0.22
APTR-201ENST00000398043 CCKBRP32239 447 aa16.45■□□□□ 0.22
APTR-201ENST00000398043 KCNJ1P48048 391 aa16.45■□□□□ 0.22
APTR-201ENST00000398043 XKR5Q6UX68 686 aa16.45■□□□□ 0.22
APTR-201ENST00000398043 ZNF574Q6ZN55 896 aaPredicted RBP16.45■□□□□ 0.22
APTR-201ENST00000398043 LINC00523Q86TU6 105 aa16.45■□□□□ 0.22
APTR-201ENST00000398043 SLITRK4Q8IW52 837 aa16.45■□□□□ 0.22
APTR-201ENST00000398043 OR52K1Q8NGK4 314 aa16.45■□□□□ 0.22
APTR-201ENST00000398043 LRRC45Q96CN5 670 aa16.45■□□□□ 0.22
APTR-201ENST00000398043 CCDC97Q96F63 343 aaPredicted RBP16.45■□□□□ 0.22
APTR-201ENST00000398043 LIN37Q96GY3 246 aaPredicted RBP16.45■□□□□ 0.22
APTR-201ENST00000398043 DNAJC1Q96KC8 554 aaKnown RBP16.45■□□□□ 0.22
APTR-201ENST00000398043 POLR1BQ9H9Y6 1135 aa16.45■□□□□ 0.22
APTR-201ENST00000398043 SARS2Q9NP81 518 aaKnown RBP16.45■□□□□ 0.22
APTR-201ENST00000398043 ASCL3Q9NQ33 180 aa16.45■□□□□ 0.22
APTR-201ENST00000398043 CASS4Q9NQ75 786 aa16.45■□□□□ 0.22
APTR-201ENST00000398043 PRDM8Q9NQV8 689 aa16.45■□□□□ 0.22
APTR-201ENST00000398043 PAK5Q9P286 719 aa16.45■□□□□ 0.22
APTR-201ENST00000398043 SATB2Q9UPW6 733 aa16.45■□□□□ 0.22
APTR-201ENST00000398043 RAXQ9Y2V3 346 aa16.45■□□□□ 0.22
APTR-201ENST00000398043 TRBV23OR9-2A0A075B6M9 112 aa16.44■□□□□ 0.22
APTR-201ENST00000398043 RHPN2P1A8MT19 583 aa16.44■□□□□ 0.22
APTR-201ENST00000398043 CCL22O00626 93 aa16.44■□□□□ 0.22
APTR-201ENST00000398043 BRAFP15056 766 aa16.44■□□□□ 0.22
APTR-201ENST00000398043 HADHAP40939 763 aa16.44■□□□□ 0.22
APTR-201ENST00000398043 UBE2IP63279 158 aaKnown RBP16.44■□□□□ 0.22
APTR-201ENST00000398043 GABREP78334 506 aa16.44■□□□□ 0.22
APTR-201ENST00000398043 CFHR1Q03591 330 aa16.44■□□□□ 0.22
APTR-201ENST00000398043 DMPKQ09013 629 aa16.44■□□□□ 0.22
APTR-201ENST00000398043 POU6F1Q14863 301 aa16.44■□□□□ 0.22
APTR-201ENST00000398043 CLPPQ16740 277 aaPredicted RBP16.44■□□□□ 0.22
APTR-201ENST00000398043 LONRF2Q1L5Z9 754 aa16.44■□□□□ 0.22
APTR-201ENST00000398043 PLA2G4EQ3MJ16 856 aa16.44■□□□□ 0.22
APTR-201ENST00000398043 ABRAXAS1Q6UWZ7 409 aa16.44■□□□□ 0.22
APTR-201ENST00000398043 WASH2PQ6VEQ5 465 aa16.44■□□□□ 0.22
APTR-201ENST00000398043 SLC35F6Q8N357 371 aa16.44■□□□□ 0.22
APTR-201ENST00000398043 GDAP1Q8TB36 358 aa16.44■□□□□ 0.22
APTR-201ENST00000398043 STYXQ8WUJ0 223 aa16.44■□□□□ 0.22
APTR-201ENST00000398043 PBKQ96KB5 322 aa16.44■□□□□ 0.22
APTR-201ENST00000398043 FOXP3Q9BZS1 431 aa16.44■□□□□ 0.22
APTR-201ENST00000398043 ASB8Q9H765 288 aa16.44■□□□□ 0.22
APTR-201ENST00000398043 WASH6PQ9NQA3 447 aa16.44■□□□□ 0.22
APTR-201ENST00000398043 RAB6BQ9NRW1 208 aa16.44■□□□□ 0.22
APTR-201ENST00000398043 PCDHGA8Q9Y5G5 932 aa16.44■□□□□ 0.22
APTR-201ENST00000398043 DNMT3AQ9Y6K1 912 aaPredicted RBP16.44■□□□□ 0.22
APTR-201ENST00000398043 AK5Q9Y6K8 562 aa16.44■□□□□ 0.22
APTR-201ENST00000398043 IGLV3-16A0A075B6K0 115 aa16.43■□□□□ 0.22
APTR-201ENST00000398043 IGHV1OR21-1A0A087WYE8 117 aa16.43■□□□□ 0.22
APTR-201ENST00000398043 KIR2DS5A0A0G2JLQ3 304 aa16.43■□□□□ 0.22
APTR-201ENST00000398043 A0A0G2JNG1 304 aa16.43■□□□□ 0.22
APTR-201ENST00000398043 USP27XA6NNY8 438 aa16.43■□□□□ 0.22
APTR-201ENST00000398043 KIR2DS3K7RE56 304 aa16.43■□□□□ 0.22
APTR-201ENST00000398043 ZSCAN12O43309 604 aa16.43■□□□□ 0.22
APTR-201ENST00000398043 KRT37O76014 449 aa16.43■□□□□ 0.22
APTR-201ENST00000398043 XRCC1P18887 633 aaPredicted RBP16.43■□□□□ 0.22
APTR-201ENST00000398043 ALDH4A1P30038 563 aa16.43■□□□□ 0.22
APTR-201ENST00000398043 CSF2RBP32927 897 aa16.43■□□□□ 0.22
APTR-201ENST00000398043 CDKN1CP49918 316 aaPredicted RBP16.43■□□□□ 0.22
APTR-201ENST00000398043 INHBCP55103 352 aa16.43■□□□□ 0.22
APTR-201ENST00000398043 TMPRSS15P98073 1019 aa16.43■□□□□ 0.22
APTR-201ENST00000398043 CDH17Q12864 832 aa16.43■□□□□ 0.22
APTR-201ENST00000398043 KIR2DS5Q14953 304 aa16.43■□□□□ 0.22
APTR-201ENST00000398043 INSCQ1MX18 579 aa16.43■□□□□ 0.22
APTR-201ENST00000398043 TBC1D25Q3MII6 688 aa16.43■□□□□ 0.22
APTR-201ENST00000398043 AGAP9Q5VTM2 703 aa16.43■□□□□ 0.22
APTR-201ENST00000398043 TTC27Q6P3X3 843 aa16.43■□□□□ 0.22
APTR-201ENST00000398043 SNX20Q7Z614 316 aa16.43■□□□□ 0.22
APTR-201ENST00000398043 TRAPPC5Q8IUR0 188 aa16.43■□□□□ 0.22
APTR-201ENST00000398043 NXPE1Q8N323 547 aa16.43■□□□□ 0.22
APTR-201ENST00000398043 CCDC89Q8N998 374 aa16.43■□□□□ 0.22
APTR-201ENST00000398043 SNIP1Q8TAD8 396 aaKnown RBP16.43■□□□□ 0.22
APTR-201ENST00000398043 COG1Q8WTW3 980 aa16.43■□□□□ 0.22
APTR-201ENST00000398043 CDKN2AIPNLQ96HQ2 116 aa16.43■□□□□ 0.22
APTR-201ENST00000398043 MS4A14Q96JA4 679 aa16.43■□□□□ 0.22
APTR-201ENST00000398043 TMEM74Q96NL1 305 aa16.43■□□□□ 0.22
APTR-201ENST00000398043 NUDT22Q9BRQ3 303 aa16.43■□□□□ 0.22
APTR-201ENST00000398043 ZCCHC2Q9C0B9 1178 aaKnown RBP16.43■□□□□ 0.22
APTR-201ENST00000398043 SYNDIG1Q9H7V2 258 aa16.43■□□□□ 0.22
APTR-201ENST00000398043 EIF2B3Q9NR50 452 aaKnown RBP16.43■□□□□ 0.22
APTR-201ENST00000398043 HOMER3Q9NSC5 361 aa16.43■□□□□ 0.22
APTR-201ENST00000398043 TRMT1Q9NXH9 659 aaKnown RBP16.43■□□□□ 0.22
APTR-201ENST00000398043 ZNF624Q9P2J8 865 aaPredicted RBP16.43■□□□□ 0.22
APTR-201ENST00000398043 SDK2Q58EX2 2172 aa16.43■□□□□ 0.22
APTR-201ENST00000398043 CCDC187A0A096LP49 1063 aa16.42■□□□□ 0.22
APTR-201ENST00000398043 OR5K4A6NMS3 321 aa16.42■□□□□ 0.22
APTR-201ENST00000398043 SNX2O60749 519 aa16.42■□□□□ 0.22
APTR-201ENST00000398043 KCNJ13O60928 360 aa16.42■□□□□ 0.22
APTR-201ENST00000398043 CPNE6O95741 557 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms