RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 NTRK1P04629 796 aa15.85■□□□□ 0.13
CHMP1A-201ENST00000397901 APLP1P51693 650 aa15.85■□□□□ 0.13
CHMP1A-201ENST00000397901 HERVK_113P63132 956 aa15.85■□□□□ 0.13
CHMP1A-201ENST00000397901 CCL14Q16627 93 aa15.85■□□□□ 0.13
CHMP1A-201ENST00000397901 LRIT3Q3SXY7 679 aa15.85■□□□□ 0.13
CHMP1A-201ENST00000397901 CST9Q5W186 159 aa15.85■□□□□ 0.13
CHMP1A-201ENST00000397901 NEK10Q6ZWH5 1172 aa15.85■□□□□ 0.13
CHMP1A-201ENST00000397901 BPHLQ86WA6 291 aaPredicted RBP15.85■□□□□ 0.13
CHMP1A-201ENST00000397901 SNX29P2Q8IUI4 249 aa15.85■□□□□ 0.13
CHMP1A-201ENST00000397901 TMEM86AQ8N2M4 240 aa15.85■□□□□ 0.13
CHMP1A-201ENST00000397901 ZCCHC7Q8N3Z6 543 aaKnown RBP15.85■□□□□ 0.13
CHMP1A-201ENST00000397901 L3HYPDHQ96EM0 354 aa15.85■□□□□ 0.13
CHMP1A-201ENST00000397901 CENPNQ96H22 339 aaPredicted RBP15.85■□□□□ 0.13
CHMP1A-201ENST00000397901 C17orf80Q9BSJ5 609 aa15.85■□□□□ 0.13
CHMP1A-201ENST00000397901 ERVK-6Q9BXR3 956 aa15.85■□□□□ 0.13
CHMP1A-201ENST00000397901 MIOSQ9NXC5 875 aa15.85■□□□□ 0.13
CHMP1A-201ENST00000397901 SMPD3Q9NY59 655 aaPredicted RBP15.85■□□□□ 0.13
CHMP1A-201ENST00000397901 TBC1D14Q9P2M4 693 aa15.85■□□□□ 0.13
CHMP1A-201ENST00000397901 ABCD2Q9UBJ2 740 aa15.85■□□□□ 0.13
CHMP1A-201ENST00000397901 ZNF229Q9UJW7 825 aa15.85■□□□□ 0.13
CHMP1A-201ENST00000397901 A0A1W2PQ67 120 aa15.85■□□□□ 0.13
CHMP1A-201ENST00000397901 AQP12BA6NM10 295 aa15.85■□□□□ 0.13
CHMP1A-201ENST00000397901 UBXN8O00124 270 aa15.85■□□□□ 0.13
CHMP1A-201ENST00000397901 EI24O14681 340 aa15.85■□□□□ 0.13
CHMP1A-201ENST00000397901 ARPC2O15144 300 aa15.85■□□□□ 0.13
CHMP1A-201ENST00000397901 INPP4BO15327 924 aa15.85■□□□□ 0.13
CHMP1A-201ENST00000397901 BCAS1O75363 584 aaPredicted RBP15.85■□□□□ 0.13
CHMP1A-201ENST00000397901 CDK14O94921 469 aa15.85■□□□□ 0.13
CHMP1A-201ENST00000397901 MT-ND1P03886 318 aa15.85■□□□□ 0.13
CHMP1A-201ENST00000397901 CXCR2P25025 360 aa15.85■□□□□ 0.13
CHMP1A-201ENST00000397901 NKX2-5P52952 324 aaPredicted RBP15.85■□□□□ 0.13
CHMP1A-201ENST00000397901 CYBRD1Q53TN4 286 aa15.85■□□□□ 0.13
CHMP1A-201ENST00000397901 FBXO48Q5FWF7 155 aa15.85■□□□□ 0.13
CHMP1A-201ENST00000397901 XAF1Q6GPH4 301 aa15.85■□□□□ 0.13
CHMP1A-201ENST00000397901 USP51Q70EK9 711 aa15.85■□□□□ 0.13
CHMP1A-201ENST00000397901 PIWIL3Q7Z3Z3 882 aaKnown RBP15.85■□□□□ 0.13
CHMP1A-201ENST00000397901 AQP12AQ8IXF9 295 aa15.85■□□□□ 0.13
CHMP1A-201ENST00000397901 ADGRG5Q8IZF4 528 aa15.85■□□□□ 0.13
CHMP1A-201ENST00000397901 TUBGCP3Q96CW5 907 aa15.85■□□□□ 0.13
CHMP1A-201ENST00000397901 HOPXQ9BPY8 73 aaPredicted RBP15.85■□□□□ 0.13
CHMP1A-201ENST00000397901 SP140LQ9H930 580 aa15.85■□□□□ 0.13
CHMP1A-201ENST00000397901 RGS18Q9NS28 235 aa15.85■□□□□ 0.13
CHMP1A-201ENST00000397901 TMLHEQ9NVH6 421 aa15.85■□□□□ 0.13
CHMP1A-201ENST00000397901 NDUFAF1Q9Y375 327 aa15.85■□□□□ 0.13
CHMP1A-201ENST00000397901 NYNRINQ9P2P1 1898 aaKnown RBP15.84■□□□□ 0.13
CHMP1A-201ENST00000397901 FGF10O15520 208 aaPredicted RBP15.84■□□□□ 0.13
CHMP1A-201ENST00000397901 SYNCRIPO60506 623 aaKnown RBP15.84■□□□□ 0.13
CHMP1A-201ENST00000397901 ABCB7O75027 752 aa15.84■□□□□ 0.13
CHMP1A-201ENST00000397901 LINC00032P0C843 101 aa15.84■□□□□ 0.13
CHMP1A-201ENST00000397901 NCK1P16333 377 aa15.84■□□□□ 0.13
CHMP1A-201ENST00000397901 SLC6A2P23975 617 aa15.84■□□□□ 0.13
CHMP1A-201ENST00000397901 PLA2G16P53816 162 aa15.84■□□□□ 0.13
CHMP1A-201ENST00000397901 CHRNEQ04844 493 aa15.84■□□□□ 0.13
CHMP1A-201ENST00000397901 RPS6KA2Q15349 733 aa15.84■□□□□ 0.13
CHMP1A-201ENST00000397901 SLC14A2Q15849 920 aa15.84■□□□□ 0.13
CHMP1A-201ENST00000397901 CYP51A1Q16850 503 aa15.84■□□□□ 0.13
CHMP1A-201ENST00000397901 PFKFB4Q16877 469 aa15.84■□□□□ 0.13
CHMP1A-201ENST00000397901 TIGD7Q6NT04 549 aaPredicted RBP15.84■□□□□ 0.13
CHMP1A-201ENST00000397901 CRTC3Q6UUV7 619 aa15.84■□□□□ 0.13
CHMP1A-201ENST00000397901 AGMOQ6ZNB7 445 aa15.84■□□□□ 0.13
CHMP1A-201ENST00000397901 ZFP90Q8TF47 636 aa15.84■□□□□ 0.13
CHMP1A-201ENST00000397901 RTP3Q9BQQ7 232 aa15.84■□□□□ 0.13
CHMP1A-201ENST00000397901 NEK6Q9HC98 313 aa15.84■□□□□ 0.13
CHMP1A-201ENST00000397901 SATB2Q9UPW6 733 aa15.84■□□□□ 0.13
CHMP1A-201ENST00000397901 V9GYQ6 96 aa15.84■□□□□ 0.13
CHMP1A-201ENST00000397901 CENPFP49454 3210 aa15.84■□□□□ 0.13
CHMP1A-201ENST00000397901 S1PR4O95977 384 aa15.84■□□□□ 0.13
CHMP1A-201ENST00000397901 IGLV3-25P01717 112 aa15.84■□□□□ 0.13
CHMP1A-201ENST00000397901 HGFP14210 728 aa15.84■□□□□ 0.13
CHMP1A-201ENST00000397901 CYP2C18P33260 490 aa15.84■□□□□ 0.13
CHMP1A-201ENST00000397901 CPT1AP50416 773 aa15.84■□□□□ 0.13
CHMP1A-201ENST00000397901 BEX3Q00994 111 aa15.84■□□□□ 0.13
CHMP1A-201ENST00000397901 DSC2Q02487 901 aa15.84■□□□□ 0.13
CHMP1A-201ENST00000397901 AQP6Q13520 282 aa15.84■□□□□ 0.13
CHMP1A-201ENST00000397901 AASDHQ4L235 1098 aaPredicted RBP15.84■□□□□ 0.13
CHMP1A-201ENST00000397901 TIGD5Q53EQ6 642 aa15.84■□□□□ 0.13
CHMP1A-201ENST00000397901 WDR45BQ5MNZ6 344 aa15.84■□□□□ 0.13
CHMP1A-201ENST00000397901 MANEALQ5VSG8 457 aa15.84■□□□□ 0.13
CHMP1A-201ENST00000397901 LCN8Q6JVE9 175 aa15.84■□□□□ 0.13
CHMP1A-201ENST00000397901 MFSD4AQ8N468 514 aa15.84■□□□□ 0.13
CHMP1A-201ENST00000397901 DNAJB14Q8TBM8 379 aa15.84■□□□□ 0.13
CHMP1A-201ENST00000397901 SUN5Q8TC36 379 aa15.84■□□□□ 0.13
CHMP1A-201ENST00000397901 LRRC58Q96CX6 371 aa15.84■□□□□ 0.13
CHMP1A-201ENST00000397901 TMEM209Q96SK2 561 aa15.84■□□□□ 0.13
CHMP1A-201ENST00000397901 SLC25A51Q9H1U9 297 aa15.84■□□□□ 0.13
CHMP1A-201ENST00000397901 TRIT1Q9H3H1 467 aaKnown RBP15.84■□□□□ 0.13
CHMP1A-201ENST00000397901 NOL6Q9H6R4 1146 aaKnown RBP15.84■□□□□ 0.13
CHMP1A-201ENST00000397901 CSNK1G1Q9HCP0 422 aa15.84■□□□□ 0.13
CHMP1A-201ENST00000397901 POLR3BQ9NW08 1133 aaPredicted RBP15.84■□□□□ 0.13
CHMP1A-201ENST00000397901 ENPP5Q9UJA9 477 aa15.84■□□□□ 0.13
CHMP1A-201ENST00000397901 TTC34A8MYJ7 566 aa15.83■□□□□ 0.12
CHMP1A-201ENST00000397901 E9PAM4 449 aa15.83■□□□□ 0.12
CHMP1A-201ENST00000397901 H3BMM5 538 aa15.83■□□□□ 0.12
CHMP1A-201ENST00000397901 AZIN1O14977 448 aa15.83■□□□□ 0.12
CHMP1A-201ENST00000397901 ACOX3O15254 700 aa15.83■□□□□ 0.12
CHMP1A-201ENST00000397901 SCO2O43819 266 aa15.83■□□□□ 0.12
CHMP1A-201ENST00000397901 MYL3P08590 195 aa15.83■□□□□ 0.12
CHMP1A-201ENST00000397901 GSTM2P28161 218 aa15.83■□□□□ 0.12
CHMP1A-201ENST00000397901 PCSK1P29120 753 aa15.83■□□□□ 0.12
CHMP1A-201ENST00000397901 HOXC8P31273 242 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms