RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 TBC1D3DA0A087WVF3 549 aa6.73□□□□□ -1.33
SMCO1-201ENST00000397537 TBC1D3IA0A087WXS9 549 aa6.73□□□□□ -1.33
SMCO1-201ENST00000397537 TBC1D3EA0A087X179 549 aa6.73□□□□□ -1.33
SMCO1-201ENST00000397537 TBC1D3KA0A087X1G2 549 aa6.73□□□□□ -1.33
SMCO1-201ENST00000397537 TBC1D3BA6NDS4 549 aa6.73□□□□□ -1.33
SMCO1-201ENST00000397537 TBC1D3FA6NER0 549 aaPredicted RBP6.73□□□□□ -1.33
SMCO1-201ENST00000397537 YDJCA8MPS7 323 aa6.73□□□□□ -1.33
SMCO1-201ENST00000397537 GNAT3A8MTJ3 354 aa6.73□□□□□ -1.33
SMCO1-201ENST00000397537 SHISA8B8ZZ34 492 aa6.73□□□□□ -1.33
SMCO1-201ENST00000397537 TBC1D3LB9A6J9 549 aa6.73□□□□□ -1.33
SMCO1-201ENST00000397537 TEX33O43247 280 aa6.73□□□□□ -1.33
SMCO1-201ENST00000397537 SELENOFO60613 162 aa6.73□□□□□ -1.33
SMCO1-201ENST00000397537 KLHL18O94889 574 aa6.73□□□□□ -1.33
SMCO1-201ENST00000397537 GH1P01241 217 aa6.73□□□□□ -1.33
SMCO1-201ENST00000397537 GASTP01350 101 aa6.73□□□□□ -1.33
SMCO1-201ENST00000397537 TBC1D3HP0C7X1 549 aa6.73□□□□□ -1.33
SMCO1-201ENST00000397537 RAP2AP10114 183 aa6.73□□□□□ -1.33
SMCO1-201ENST00000397537 FMO4P31512 558 aa6.73□□□□□ -1.33
SMCO1-201ENST00000397537 MAGEA9P43362 315 aa6.73□□□□□ -1.33
SMCO1-201ENST00000397537 TOB1P50616 345 aaPredicted RBP6.73□□□□□ -1.33
SMCO1-201ENST00000397537 ARSEP51690 589 aa6.73□□□□□ -1.33
SMCO1-201ENST00000397537 LBX1P52954 281 aa6.73□□□□□ -1.33
SMCO1-201ENST00000397537 PLTPP55058 493 aa6.73□□□□□ -1.33
SMCO1-201ENST00000397537 HNRNPH2P55795 449 aaKnown RBP6.73□□□□□ -1.33
SMCO1-201ENST00000397537 FOXL2P58012 376 aa6.73□□□□□ -1.33
SMCO1-201ENST00000397537 IL13RA1P78552 427 aa6.73□□□□□ -1.33
SMCO1-201ENST00000397537 ATP2C1P98194 919 aaPredicted RBP6.73□□□□□ -1.33
SMCO1-201ENST00000397537 RBPJQ06330 500 aa6.73□□□□□ -1.33
SMCO1-201ENST00000397537 CXCL9Q07325 125 aa6.73□□□□□ -1.33
SMCO1-201ENST00000397537 VEPH1Q14D04 833 aa6.73□□□□□ -1.33
SMCO1-201ENST00000397537 IQCB1Q15051 598 aa6.73□□□□□ -1.33
SMCO1-201ENST00000397537 CBWD6Q4V339 395 aa6.73□□□□□ -1.33
SMCO1-201ENST00000397537 CBWD3Q5JTY5 395 aa6.73□□□□□ -1.33
SMCO1-201ENST00000397537 TBC1D3GQ6DHY5 549 aa6.73□□□□□ -1.33
SMCO1-201ENST00000397537 TBC1D3CQ6IPX1 549 aa6.73□□□□□ -1.33
SMCO1-201ENST00000397537 TMEM182Q6ZP80 229 aaPredicted RBP6.73□□□□□ -1.33
SMCO1-201ENST00000397537 USP30Q70CQ3 517 aa6.73□□□□□ -1.33
SMCO1-201ENST00000397537 FRMD5Q7Z6J6 570 aa6.73□□□□□ -1.33
SMCO1-201ENST00000397537 SLCO6A1Q86UG4 719 aa6.73□□□□□ -1.33
SMCO1-201ENST00000397537 MFN1Q8IWA4 741 aa6.73□□□□□ -1.33
SMCO1-201ENST00000397537 TBC1D3Q8IZP1 549 aaPredicted RBP6.73□□□□□ -1.33
SMCO1-201ENST00000397537 CLEC1AQ8NC01 280 aa6.73□□□□□ -1.33
SMCO1-201ENST00000397537 CKAP2Q8WWK9 683 aa6.73□□□□□ -1.33
SMCO1-201ENST00000397537 NPIPB3Q92617 1050 aa6.73□□□□□ -1.33
SMCO1-201ENST00000397537 EFHD2Q96C19 240 aaPredicted RBP6.73□□□□□ -1.33
SMCO1-201ENST00000397537 WDR92Q96MX6 357 aa6.73□□□□□ -1.33
SMCO1-201ENST00000397537 SLC46A1Q96NT5 459 aa6.73□□□□□ -1.33
SMCO1-201ENST00000397537 QRFPRQ96P65 431 aa6.73□□□□□ -1.33
SMCO1-201ENST00000397537 ASCL2Q99929 193 aa6.73□□□□□ -1.33
SMCO1-201ENST00000397537 CDK19Q9BWU1 502 aa6.73□□□□□ -1.33
SMCO1-201ENST00000397537 OSBPL10Q9BXB5 764 aa6.73□□□□□ -1.33
SMCO1-201ENST00000397537 SERHL2Q9H4I8 314 aa6.73□□□□□ -1.33
SMCO1-201ENST00000397537 SYNDIG1Q9H7V2 258 aa6.73□□□□□ -1.33
SMCO1-201ENST00000397537 AGPAT3Q9NRZ7 376 aa6.73□□□□□ -1.33
SMCO1-201ENST00000397537 DLGAP2Q9P1A6 1054 aa6.73□□□□□ -1.33
SMCO1-201ENST00000397537 HAO1Q9UJM8 370 aa6.73□□□□□ -1.33
SMCO1-201ENST00000397537 KIAA1257Q9ULG3 409 aa6.73□□□□□ -1.33
SMCO1-201ENST00000397537 WBP11Q9Y2W2 641 aaKnown RBP6.73□□□□□ -1.33
SMCO1-201ENST00000397537 KIF7Q2M1P5 1343 aa6.72□□□□□ -1.33
SMCO1-201ENST00000397537 A0A1W2PPM1 405 aa6.72□□□□□ -1.33
SMCO1-201ENST00000397537 LNP1A1A4G5 178 aa6.72□□□□□ -1.33
SMCO1-201ENST00000397537 ARHGAP42A6NI28 874 aa6.72□□□□□ -1.33
SMCO1-201ENST00000397537 ZNF839A8K0R7 811 aa6.72□□□□□ -1.33
SMCO1-201ENST00000397537 FADS2P1A8MWK0 482 aa6.72□□□□□ -1.33
SMCO1-201ENST00000397537 TLR4O00206 839 aa6.72□□□□□ -1.33
SMCO1-201ENST00000397537 POLRMTO00411 1230 aaKnown RBP6.72□□□□□ -1.33
SMCO1-201ENST00000397537 KRT14P02533 472 aa6.72□□□□□ -1.33
SMCO1-201ENST00000397537 INHBBP09529 407 aa6.72□□□□□ -1.33
SMCO1-201ENST00000397537 UQCRFS1P1P0C7P4 283 aa6.72□□□□□ -1.33
SMCO1-201ENST00000397537 KCNA3P22001 575 aa6.72□□□□□ -1.33
SMCO1-201ENST00000397537 PRKAR1BP31321 381 aa6.72□□□□□ -1.33
SMCO1-201ENST00000397537 PBX1P40424 430 aa6.72□□□□□ -1.33
SMCO1-201ENST00000397537 PCP4P48539 62 aa6.72□□□□□ -1.33
SMCO1-201ENST00000397537 SERPINH1P50454 418 aaKnown RBP6.72□□□□□ -1.33
SMCO1-201ENST00000397537 CCNHP51946 323 aaPredicted RBP6.72□□□□□ -1.33
SMCO1-201ENST00000397537 MFAP3P55082 362 aa6.72□□□□□ -1.33
SMCO1-201ENST00000397537 DHX34Q14147 1143 aaKnown RBP6.72□□□□□ -1.33
SMCO1-201ENST00000397537 USP10Q14694 798 aaKnown RBP6.72□□□□□ -1.33
SMCO1-201ENST00000397537 DLG2Q15700 870 aa6.72□□□□□ -1.33
SMCO1-201ENST00000397537 KCNA10Q16322 511 aa6.72□□□□□ -1.33
SMCO1-201ENST00000397537 CHSY3Q70JA7 882 aa6.72□□□□□ -1.33
SMCO1-201ENST00000397537 FAM219AQ8IW50 185 aa6.72□□□□□ -1.33
SMCO1-201ENST00000397537 TSPAN14Q8NG11 270 aa6.72□□□□□ -1.33
SMCO1-201ENST00000397537 FAM110DQ8TAY7 271 aaPredicted RBP6.72□□□□□ -1.33
SMCO1-201ENST00000397537 NKD2Q969F2 451 aaPredicted RBP6.72□□□□□ -1.33
SMCO1-201ENST00000397537 LRRC39Q96DD0 335 aa6.72□□□□□ -1.33
SMCO1-201ENST00000397537 RNF31Q96EP0 1072 aa6.72□□□□□ -1.33
SMCO1-201ENST00000397537 PGM2Q96G03 612 aa6.72□□□□□ -1.33
SMCO1-201ENST00000397537 LRRC37BQ96QE4 947 aa6.72□□□□□ -1.33
SMCO1-201ENST00000397537 KCNK9Q9NPC2 374 aa6.72□□□□□ -1.33
SMCO1-201ENST00000397537 PAG1Q9NWQ8 432 aa6.72□□□□□ -1.33
SMCO1-201ENST00000397537 KCNN3Q9UGI6 736 aa6.72□□□□□ -1.33
SMCO1-201ENST00000397537 CHRNA9Q9UGM1 479 aa6.72□□□□□ -1.33
SMCO1-201ENST00000397537 DUSP13Q9UII6 198 aa6.72□□□□□ -1.33
SMCO1-201ENST00000397537 GGA1Q9UJY5 639 aa6.72□□□□□ -1.33
SMCO1-201ENST00000397537 NSFL1CQ9UNZ2 370 aaKnown RBP6.72□□□□□ -1.33
SMCO1-201ENST00000397537 CMAHPQ9Y471 501 aa6.72□□□□□ -1.33
SMCO1-201ENST00000397537 VPS4BO75351 444 aa6.71□□□□□ -1.33
SMCO1-201ENST00000397537 CH25HO95992 272 aa6.71□□□□□ -1.33
SMCO1-201ENST00000397537 OTCP00480 354 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms