RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 GSNP06396 782 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 HSPA1AP0DMV8 641 aaKnown RBP4.99□□□□□ -1.61
SSR1-202ENST00000397511 HSPA1BP0DMV9 641 aaKnown RBP4.99□□□□□ -1.61
SSR1-202ENST00000397511 MATN1P21941 496 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 LEPRP48357 1165 aaKnown RBP4.99□□□□□ -1.61
SSR1-202ENST00000397511 CPT1AP50416 773 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 ARSDP51689 593 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 MLLT10P55197 1068 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 WNT3AP56704 352 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 PURAQ00577 322 aaKnown RBP4.99□□□□□ -1.61
SSR1-202ENST00000397511 C19orf57Q0VDD7 668 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 TRIM32Q13049 653 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 PRKAA1Q13131 559 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 IHHQ14623 411 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 TAF1CQ15572 869 aaPredicted RBP4.99□□□□□ -1.61
SSR1-202ENST00000397511 UPP1Q16831 310 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 KIF19Q2TAC6 998 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 STXBP5Q5T5C0 1151 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 NEK5Q6P3R8 708 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 LINC00299Q6ZSB3 139 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 CAMK1DQ8IU85 385 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 SPATA2LQ8IUW3 424 aaPredicted RBP4.99□□□□□ -1.61
SSR1-202ENST00000397511 HERC6Q8IVU3 1022 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 ARHGAP12Q8IWW6 846 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 ANKFN1Q8N957 763 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 MFSD2AQ8NA29 543 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 TOP1MTQ969P6 601 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 ASB9Q96DX5 294 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 MAGED4Q96JG8 741 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 MRGPRX2Q96LB1 330 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 VPS35Q96QK1 796 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 ADAM2Q99965 735 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 ADI1Q9BV57 179 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 NOL11Q9H8H0 719 aaKnown RBP4.99□□□□□ -1.61
SSR1-202ENST00000397511 SP140LQ9H930 580 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 EFCAB1Q9HAE3 211 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 GLOD4Q9HC38 313 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 AKIP1Q9NQ31 210 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 SMOXQ9NWM0 555 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 MARCH4Q9P2E8 410 aaPredicted RBP4.99□□□□□ -1.61
SSR1-202ENST00000397511 DNMT3BQ9UBC3 853 aaKnown RBP4.99□□□□□ -1.61
SSR1-202ENST00000397511 ZMAT5Q9UDW3 170 aaKnown RBP4.99□□□□□ -1.61
SSR1-202ENST00000397511 KCNN3Q9UGI6 736 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 TRHDEQ9UKU6 1024 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 AURKCQ9UQB9 309 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 NOD1Q9Y239 953 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 BTRCQ9Y297 605 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 AAR2Q9Y312 384 aaKnown RBP4.99□□□□□ -1.61
SSR1-202ENST00000397511 PCDHGA8Q9Y5G5 932 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 HS3ST4Q9Y661 456 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 ARL5AQ9Y689 179 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 A0A0C4DFX4 3053 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 MYLKQ15746 1914 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 ERI2A8K979 691 aaKnown RBP4.99□□□□□ -1.61
SSR1-202ENST00000397511 NT5C1B-RDH14C9J2C7 533 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 E9PAM4 449 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 SLC22A2O15244 555 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 GPR39O43194 453 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 MTSS1O43312 755 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 GALR2O43603 387 aaPredicted RBP4.99□□□□□ -1.61
SSR1-202ENST00000397511 B4GALT3O60512 393 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 RFPL2O75678 378 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 NADKO95544 446 aaPredicted RBP4.99□□□□□ -1.61
SSR1-202ENST00000397511 CPNE6O95741 557 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 F9P00740 461 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 UGT2B4P06133 528 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 CKMT2P17540 419 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 CD53P19397 219 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 ENPP1P22413 925 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 AXLP30530 894 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 SLC7A1P30825 629 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 ARCN1P48444 511 aaKnown RBP4.99□□□□□ -1.61
SSR1-202ENST00000397511 FOXA1P55317 472 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 MRPS15P82914 257 aaKnown RBP4.99□□□□□ -1.61
SSR1-202ENST00000397511 RHDQ02161 417 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 MERTKQ12866 999 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 SELPLGQ14242 412 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 CAPRIN1Q14444 709 aaKnown RBP4.99□□□□□ -1.61
SSR1-202ENST00000397511 MAPK11Q15759 364 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 GPR162Q16538 588 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.99□□□□□ -1.615e-8■□□□□ 10.6
SSR1-202ENST00000397511 KIAA1841Q6NSI8 718 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 ZCCHC8Q6NZY4 707 aaKnown RBP4.99□□□□□ -1.61
SSR1-202ENST00000397511 PRR23CQ6ZRP0 262 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 BNIPLQ7Z465 357 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 ZNF280BQ86YH2 543 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 DDIASQ8IXT1 998 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 KDM1BQ8NB78 822 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 ATAD1Q8NBU5 361 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 GRPEL2Q8TAA5 225 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 STYXQ8WUJ0 223 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 NUDT8Q8WV74 236 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 CYGBQ8WWM9 190 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 NTAN1Q96AB6 310 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 ZUFSPQ96AP4 578 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 HMCESQ96FZ2 354 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 FEM1CQ96JP0 617 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 TBATAQ96M53 351 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 NSUN5Q96P11 429 aaKnown RBP4.99□□□□□ -1.61
SSR1-202ENST00000397511 PARK7Q99497 189 aaKnown RBP4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms