RNA–Protein interactions for RNA: ENST00000396859.5

GAPDH-204, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-204ENST00000396859 CHST15Q7LFX5 561 aaPredicted RBP13.5□□□□□ -0.25
GAPDH-204ENST00000396859 KANSL1Q7Z3B3 1105 aa13.5□□□□□ -0.25
GAPDH-204ENST00000396859 SLC25A45Q8N413 288 aa13.5□□□□□ -0.25
GAPDH-204ENST00000396859 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.5□□□□□ -0.252e-7■□□□□ 10.6
GAPDH-204ENST00000396859 NOA1Q8NC60 698 aaKnown RBP13.5□□□□□ -0.25
GAPDH-204ENST00000396859 OR4C6Q8NH72 309 aa13.5□□□□□ -0.25
GAPDH-204ENST00000396859 EBNA1BP2Q99848 306 aaKnown RBP13.5□□□□□ -0.25
GAPDH-204ENST00000396859 NCKIPSDQ9NZQ3 722 aa13.5□□□□□ -0.25
GAPDH-204ENST00000396859 GPR34Q9UPC5 381 aa13.5□□□□□ -0.25
GAPDH-204ENST00000396859 LRP4O75096 1905 aa13.5□□□□□ -0.25
GAPDH-204ENST00000396859 TDRD6O60522 2096 aaKnown RBP13.49□□□□□ -0.25
GAPDH-204ENST00000396859 CHUKO15111 745 aa13.49□□□□□ -0.25
GAPDH-204ENST00000396859 EIF3HO15372 352 aaKnown RBP eCLIP13.49□□□□□ -0.25
GAPDH-204ENST00000396859 CD3EAPO15446 510 aaKnown RBP13.49□□□□□ -0.25
GAPDH-204ENST00000396859 LDOC1O95751 146 aaPredicted RBP13.49□□□□□ -0.25
GAPDH-204ENST00000396859 FUCA1P04066 466 aa13.49□□□□□ -0.25
GAPDH-204ENST00000396859 ACP5P13686 325 aa13.49□□□□□ -0.25
GAPDH-204ENST00000396859 ATP1B2P14415 290 aaPredicted RBP13.49□□□□□ -0.25
GAPDH-204ENST00000396859 CSRP1P21291 193 aaKnown RBP13.49□□□□□ -0.25
GAPDH-204ENST00000396859 ACTR1BP42025 376 aa13.49□□□□□ -0.25
GAPDH-204ENST00000396859 NSG1P42857 185 aa13.49□□□□□ -0.25
GAPDH-204ENST00000396859 RPIAP49247 311 aa13.49□□□□□ -0.25
GAPDH-204ENST00000396859 CDKN1CP49918 316 aaPredicted RBP13.49□□□□□ -0.25
GAPDH-204ENST00000396859 ACTR1AP61163 376 aa13.49□□□□□ -0.25
GAPDH-204ENST00000396859 CTBSQ01459 385 aa13.49□□□□□ -0.25
GAPDH-204ENST00000396859 DBN1Q16643 649 aa13.49□□□□□ -0.25
GAPDH-204ENST00000396859 LONRF1Q17RB8 773 aa13.49□□□□□ -0.25
GAPDH-204ENST00000396859 KHDC1Q4VXA5 237 aaKnown RBP13.49□□□□□ -0.25
GAPDH-204ENST00000396859 SPANXN3Q5MJ09 141 aa13.49□□□□□ -0.25
GAPDH-204ENST00000396859 KCTD16Q68DU8 428 aa13.49□□□□□ -0.25
GAPDH-204ENST00000396859 ZCCHC8Q6NZY4 707 aaKnown RBP13.49□□□□□ -0.25
GAPDH-204ENST00000396859 TMEM220Q6QAJ8 160 aa13.49□□□□□ -0.25
GAPDH-204ENST00000396859 CEP128Q6ZU80 1094 aa13.49□□□□□ -0.25
GAPDH-204ENST00000396859 DET1Q7L5Y6 550 aa13.49□□□□□ -0.25
GAPDH-204ENST00000396859 TMEM135Q86UB9 458 aa13.49□□□□□ -0.25
GAPDH-204ENST00000396859 RASGEF1AQ8N9B8 481 aa13.49□□□□□ -0.25
GAPDH-204ENST00000396859 FAM46DQ8NEK8 389 aa13.49□□□□□ -0.25
GAPDH-204ENST00000396859 DEFB124Q8NES8 71 aa13.49□□□□□ -0.25
GAPDH-204ENST00000396859 CALML6Q8TD86 181 aa13.49□□□□□ -0.25
GAPDH-204ENST00000396859 GPBAR1Q8TDU6 330 aa13.49□□□□□ -0.25
GAPDH-204ENST00000396859 ART4Q93070 314 aa13.49□□□□□ -0.25
GAPDH-204ENST00000396859 FAM129AQ9BZQ8 928 aa13.49□□□□□ -0.25
GAPDH-204ENST00000396859 FOXP3Q9BZS1 431 aa13.49□□□□□ -0.25
GAPDH-204ENST00000396859 CLPBQ9H078 707 aa13.49□□□□□ -0.25
GAPDH-204ENST00000396859 VPS37BQ9H9H4 285 aa13.49□□□□□ -0.25
GAPDH-204ENST00000396859 L2HGDHQ9H9P8 463 aa13.49□□□□□ -0.25
GAPDH-204ENST00000396859 EPB41L5Q9HCM4 733 aa13.49□□□□□ -0.25
GAPDH-204ENST00000396859 C20orf96Q9NUD7 363 aaPredicted RBP13.49□□□□□ -0.25
GAPDH-204ENST00000396859 GRHL1Q9NZI5 618 aa13.49□□□□□ -0.25
GAPDH-204ENST00000396859 ZC3H7BQ9UGR2 993 aaKnown RBP13.49□□□□□ -0.25
GAPDH-204ENST00000396859 PCOLCE2Q9UKZ9 415 aa13.49□□□□□ -0.25
GAPDH-204ENST00000396859 CHMP2BQ9UQN3 213 aa13.49□□□□□ -0.25
GAPDH-204ENST00000396859 PRKAB1Q9Y478 270 aa13.49□□□□□ -0.25
GAPDH-204ENST00000396859 DNMT3AQ9Y6K1 912 aaPredicted RBP13.49□□□□□ -0.25
GAPDH-204ENST00000396859 DMDP11532 3685 aa13.49□□□□□ -0.25
GAPDH-204ENST00000396859 ZNF292O60281 2723 aa13.48□□□□□ -0.25
GAPDH-204ENST00000396859 KLHL33A6NCF5 533 aa13.48□□□□□ -0.25
GAPDH-204ENST00000396859 OR2AG2A6NM03 316 aa13.48□□□□□ -0.25
GAPDH-204ENST00000396859 YY2O15391 372 aa13.48□□□□□ -0.25
GAPDH-204ENST00000396859 KCNJ13O60928 360 aa13.48□□□□□ -0.25
GAPDH-204ENST00000396859 NDUFS3O75489 264 aa13.48□□□□□ -0.25
GAPDH-204ENST00000396859 ZNF7P17097 686 aaPredicted RBP13.48□□□□□ -0.25
GAPDH-204ENST00000396859 KCNA4P22459 653 aa13.48□□□□□ -0.25
GAPDH-204ENST00000396859 ELK3P41970 407 aa13.48□□□□□ -0.25
GAPDH-204ENST00000396859 DUSP3P51452 185 aaPredicted RBP13.48□□□□□ -0.25
GAPDH-204ENST00000396859 DAB2P98082 770 aa13.48□□□□□ -0.25
GAPDH-204ENST00000396859 BIRC2Q13490 618 aa13.48□□□□□ -0.25
GAPDH-204ENST00000396859 HLTFQ14527 1009 aaKnown RBP eCLIP13.48□□□□□ -0.25
GAPDH-204ENST00000396859 PUM1Q14671 1186 aaKnown RBP eCLIP13.48□□□□□ -0.255e-21■□□□□ 9.5
GAPDH-204ENST00000396859 PLA2G4EQ3MJ16 856 aa13.48□□□□□ -0.25
GAPDH-204ENST00000396859 MSS51Q4VC12 460 aa13.48□□□□□ -0.25
GAPDH-204ENST00000396859 RNF187Q5TA31 235 aaPredicted RBP13.48□□□□□ -0.25
GAPDH-204ENST00000396859 SLC30A9Q6PML9 568 aa13.48□□□□□ -0.25
GAPDH-204ENST00000396859 PIP4P1Q86T03 277 aa13.48□□□□□ -0.25
GAPDH-204ENST00000396859 CCDC25Q86WR0 208 aa13.48□□□□□ -0.25
GAPDH-204ENST00000396859 LMNTD2Q8IXW0 634 aa13.48□□□□□ -0.25
GAPDH-204ENST00000396859 PIANPQ8IYJ0 282 aa13.48□□□□□ -0.25
GAPDH-204ENST00000396859 PYROXD1Q8WU10 500 aa13.48□□□□□ -0.25
GAPDH-204ENST00000396859 CFAP36Q96G28 342 aa13.48□□□□□ -0.25
GAPDH-204ENST00000396859 CNDP2Q96KP4 475 aaKnown RBP13.48□□□□□ -0.25
GAPDH-204ENST00000396859 PWWP2AQ96N64 755 aa13.48□□□□□ -0.25
GAPDH-204ENST00000396859 TIMM29Q9BSF4 260 aa13.48□□□□□ -0.25
GAPDH-204ENST00000396859 TSSK1BQ9BXA7 367 aa13.48□□□□□ -0.25
GAPDH-204ENST00000396859 DPEP2Q9H4A9 486 aa13.48□□□□□ -0.25
GAPDH-204ENST00000396859 OSGEPL1Q9H4B0 414 aa13.48□□□□□ -0.25
GAPDH-204ENST00000396859 MTRF1LQ9UGC7 380 aaKnown RBP13.48□□□□□ -0.25
GAPDH-204ENST00000396859 VPS9D1Q9Y2B5 631 aa13.48□□□□□ -0.25
GAPDH-204ENST00000396859 BTBD3Q9Y2F9 522 aa13.48□□□□□ -0.25
GAPDH-204ENST00000396859 FAM169AQ9Y6X4 670 aa13.48□□□□□ -0.25
GAPDH-204ENST00000396859 PLXNB3Q9ULL4 1909 aa13.48□□□□□ -0.25
GAPDH-204ENST00000396859 PTPRZ1P23471 2315 aaPredicted RBP13.47□□□□□ -0.25
GAPDH-204ENST00000396859 USP34Q70CQ2 3546 aa13.47□□□□□ -0.25
GAPDH-204ENST00000396859 GVINP1Q7Z2Y8 2422 aa13.47□□□□□ -0.25
GAPDH-204ENST00000396859 IGLV3-16A0A075B6K0 115 aa13.47□□□□□ -0.25
GAPDH-204ENST00000396859 ESYT3A0FGR9 886 aa13.47□□□□□ -0.25
GAPDH-204ENST00000396859 B4DGG1 531 aa13.47□□□□□ -0.25
GAPDH-204ENST00000396859 TRIM38O00635 465 aa13.47□□□□□ -0.25
GAPDH-204ENST00000396859 SIGLEC6O43699 453 aa13.47□□□□□ -0.25
GAPDH-204ENST00000396859 BANF1O75531 89 aa13.47□□□□□ -0.25
GAPDH-204ENST00000396859 AP2A2O94973 939 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms