RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 CLCQ05315 142 aa23.8■■□□□ 1.4
CSNK1E-203ENST00000396832 IHHQ14623 411 aa23.8■■□□□ 1.4
CSNK1E-203ENST00000396832 MAPK11Q15759 364 aa23.8■■□□□ 1.4
CSNK1E-203ENST00000396832 SPATS1Q496A3 300 aa23.8■■□□□ 1.4
CSNK1E-203ENST00000396832 C6orf141Q5SZD1 244 aa23.8■■□□□ 1.4
CSNK1E-203ENST00000396832 BLOC1S3Q6QNY0 202 aa23.8■■□□□ 1.4
CSNK1E-203ENST00000396832 CILP2Q8IUL8 1156 aa23.8■■□□□ 1.4
CSNK1E-203ENST00000396832 SCML4Q8N228 414 aa23.8■■□□□ 1.4
CSNK1E-203ENST00000396832 MFSD4AQ8N468 514 aa23.8■■□□□ 1.4
CSNK1E-203ENST00000396832 IL12RB2Q99665 862 aa23.8■■□□□ 1.4
CSNK1E-203ENST00000396832 NDEL1Q9GZM8 345 aa23.8■■□□□ 1.4
CSNK1E-203ENST00000396832 KATNBL1Q9H079 304 aa23.8■■□□□ 1.4
CSNK1E-203ENST00000396832 TUBB1Q9H4B7 451 aa23.8■■□□□ 1.4
CSNK1E-203ENST00000396832 SLC52A3Q9NQ40 469 aa23.8■■□□□ 1.4
CSNK1E-203ENST00000396832 PCNAP12004 261 aa23.8■■□□□ 1.4
CSNK1E-203ENST00000396832 BMP4P12644 408 aa23.8■■□□□ 1.4
CSNK1E-203ENST00000396832 TPD52P55327 224 aaPredicted RBP23.8■■□□□ 1.4
CSNK1E-203ENST00000396832 CLPPQ16740 277 aaPredicted RBP23.8■■□□□ 1.4
CSNK1E-203ENST00000396832 BPIFB1Q8TDL5 484 aa23.8■■□□□ 1.4
CSNK1E-203ENST00000396832 TMBIM1Q969X1 311 aa23.8■■□□□ 1.4
CSNK1E-203ENST00000396832 TOR3AQ9H497 397 aa23.8■■□□□ 1.4
CSNK1E-203ENST00000396832 SDR39U1Q9NRG7 319 aaPredicted RBP23.8■■□□□ 1.4
CSNK1E-203ENST00000396832 MIOSQ9NXC5 875 aa23.8■■□□□ 1.4
CSNK1E-203ENST00000396832 FNDC3AQ9Y2H6 1198 aaKnown RBP23.8■■□□□ 1.4
CSNK1E-203ENST00000396832 OR4D1Q15615 310 aa23.79■■□□□ 1.4
CSNK1E-203ENST00000396832 UBXN10Q96LJ8 280 aa23.79■■□□□ 1.4
CSNK1E-203ENST00000396832 HBEGFQ99075 208 aa23.79■■□□□ 1.4
CSNK1E-203ENST00000396832 PCDHB3Q9Y5E6 796 aa23.79■■□□□ 1.4
CSNK1E-203ENST00000396832 UPK1AO00322 258 aa23.79■■□□□ 1.4
CSNK1E-203ENST00000396832 NDUFB5O43674 189 aa23.79■■□□□ 1.4
CSNK1E-203ENST00000396832 MATN4O95460 622 aa23.79■■□□□ 1.4
CSNK1E-203ENST00000396832 GP2P55259 537 aaKnown RBP23.79■■□□□ 1.4
CSNK1E-203ENST00000396832 NDUFA5Q16718 116 aa23.79■■□□□ 1.4
CSNK1E-203ENST00000396832 RAB41Q5JT25 222 aa23.79■■□□□ 1.4
CSNK1E-203ENST00000396832 PHYKPLQ8IUZ5 450 aa23.79■■□□□ 1.4
CSNK1E-203ENST00000396832 CHDHQ8NE62 594 aaPredicted RBP23.79■■□□□ 1.4
CSNK1E-203ENST00000396832 SMARCD1Q96GM5 515 aa23.79■■□□□ 1.4
CSNK1E-203ENST00000396832 IFT52Q9Y366 437 aa23.79■■□□□ 1.4
CSNK1E-203ENST00000396832 SNX5Q9Y5X3 404 aa23.79■■□□□ 1.4
CSNK1E-203ENST00000396832 PSMD3O43242 534 aa23.78■■□□□ 1.4
CSNK1E-203ENST00000396832 CACNG3O60359 315 aa23.78■■□□□ 1.4
CSNK1E-203ENST00000396832 HRH2P25021 359 aa23.78■■□□□ 1.4
CSNK1E-203ENST00000396832 SLC10A7Q0GE19 358 aa23.78■■□□□ 1.4
CSNK1E-203ENST00000396832 PAGE3Q5JUK9 113 aa23.78■■□□□ 1.4
CSNK1E-203ENST00000396832 OR7A2PQ8NGA2 310 aa23.78■■□□□ 1.4
CSNK1E-203ENST00000396832 PGAP3Q96FM1 320 aaPredicted RBP23.78■■□□□ 1.4
CSNK1E-203ENST00000396832 TBATAQ96M53 351 aa23.78■■□□□ 1.4
CSNK1E-203ENST00000396832 TSGA13Q96PP4 275 aa23.78■■□□□ 1.4
CSNK1E-203ENST00000396832 POLG2Q9UHN1 485 aa23.78■■□□□ 1.4
CSNK1E-203ENST00000396832 ZNF229Q9UJW7 825 aa23.78■■□□□ 1.4
CSNK1E-203ENST00000396832 PTGES3LE9PB15 166 aa23.78■■□□□ 1.4
CSNK1E-203ENST00000396832 PSMD11O00231 422 aa23.78■■□□□ 1.4
CSNK1E-203ENST00000396832 TPD52L2O43399 206 aaKnown RBP23.78■■□□□ 1.4
CSNK1E-203ENST00000396832 NADKO95544 446 aaPredicted RBP23.78■■□□□ 1.4
CSNK1E-203ENST00000396832 CARTPTQ16568 116 aa23.78■■□□□ 1.4
CSNK1E-203ENST00000396832 RIMKLAQ8IXN7 391 aa23.78■■□□□ 1.4
CSNK1E-203ENST00000396832 BLOC1S5Q8TDH9 187 aa23.78■■□□□ 1.4
CSNK1E-203ENST00000396832 L3HYPDHQ96EM0 354 aa23.78■■□□□ 1.4
CSNK1E-203ENST00000396832 M0R3G1 203 aa23.77■■□□□ 1.4
CSNK1E-203ENST00000396832 NDUFS2O75306 463 aa23.77■■□□□ 1.4
CSNK1E-203ENST00000396832 PTPN2P17706 415 aa23.77■■□□□ 1.4
CSNK1E-203ENST00000396832 PRDX3P30048 256 aaKnown RBP23.77■■□□□ 1.4
CSNK1E-203ENST00000396832 GJA5P36382 358 aa23.77■■□□□ 1.4
CSNK1E-203ENST00000396832 BRCC3P46736 316 aa23.77■■□□□ 1.4
CSNK1E-203ENST00000396832 SERPINH1P50454 418 aaKnown RBP23.77■■□□□ 1.4
CSNK1E-203ENST00000396832 CLCN5P51795 746 aa23.77■■□□□ 1.4
CSNK1E-203ENST00000396832 HERVK_113P63132 956 aa23.77■■□□□ 1.4
CSNK1E-203ENST00000396832 BEX3Q00994 111 aa23.77■■□□□ 1.4
CSNK1E-203ENST00000396832 SDHAF4Q5VUM1 108 aa23.77■■□□□ 1.4
CSNK1E-203ENST00000396832 ERVK-6Q9BXR3 956 aa23.77■■□□□ 1.4
CSNK1E-203ENST00000396832 CCDC90BQ9GZT6 254 aa23.77■■□□□ 1.4
CSNK1E-203ENST00000396832 POLR3BQ9NW08 1133 aaPredicted RBP23.77■■□□□ 1.4
CSNK1E-203ENST00000396832 FAM50BQ9Y247 325 aa23.77■■□□□ 1.4
CSNK1E-203ENST00000396832 ARL5AQ9Y689 179 aa23.77■■□□□ 1.4
CSNK1E-203ENST00000396832 A0A1W2PP18 115 aa23.77■■□□□ 1.4
CSNK1E-203ENST00000396832 MAN1A2O60476 641 aa23.77■■□□□ 1.4
CSNK1E-203ENST00000396832 DEAF1O75398 565 aaPredicted RBP23.77■■□□□ 1.4
CSNK1E-203ENST00000396832 CRCPO75575 148 aa23.77■■□□□ 1.4
CSNK1E-203ENST00000396832 CTSHP09668 335 aa23.77■■□□□ 1.4
CSNK1E-203ENST00000396832 LBPP18428 481 aa23.77■■□□□ 1.4
CSNK1E-203ENST00000396832 AGXTP21549 392 aa23.77■■□□□ 1.4
CSNK1E-203ENST00000396832 SCNN1GP51170 649 aa23.77■■□□□ 1.4
CSNK1E-203ENST00000396832 LSM3P62310 102 aaKnown RBP23.77■■□□□ 1.4
CSNK1E-203ENST00000396832 COQ5Q5HYK3 327 aa23.77■■□□□ 1.4
CSNK1E-203ENST00000396832 KIAA2013Q8IYS2 634 aa23.77■■□□□ 1.4
CSNK1E-203ENST00000396832 GPRC5AQ8NFJ5 357 aa23.77■■□□□ 1.4
CSNK1E-203ENST00000396832 NDNFQ8TB73 568 aa23.77■■□□□ 1.4
CSNK1E-203ENST00000396832 FAM118AQ9NWS6 357 aa23.77■■□□□ 1.4
CSNK1E-203ENST00000396832 CXCL11O14625 94 aa23.76■■□□□ 1.39
CSNK1E-203ENST00000396832 CTU2Q2VPK5 515 aaKnown RBP23.76■■□□□ 1.39
CSNK1E-203ENST00000396832 DUSP28Q4G0W2 176 aa23.76■■□□□ 1.39
CSNK1E-203ENST00000396832 UGT3A1Q6NUS8 523 aa23.76■■□□□ 1.39
CSNK1E-203ENST00000396832 Q8N9G6 341 aaPredicted RBP23.76■■□□□ 1.39
CSNK1E-203ENST00000396832 PIK3C3Q8NEB9 887 aa23.76■■□□□ 1.39
CSNK1E-203ENST00000396832 INTS7Q9NVH2 962 aaKnown RBP23.76■■□□□ 1.39
CSNK1E-203ENST00000396832 ASPDHA6ND91 283 aa23.76■■□□□ 1.39
CSNK1E-203ENST00000396832 F8W810 466 aa23.76■■□□□ 1.39
CSNK1E-203ENST00000396832 AZIN1O14977 448 aa23.76■■□□□ 1.39
CSNK1E-203ENST00000396832 HAPLN1P10915 354 aaPredicted RBP23.76■■□□□ 1.39
CSNK1E-203ENST00000396832 ALDH4A1P30038 563 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms