RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 ZNF570Q96NI8 536 aa14.8□□□□□ -0.04
CBX3-202ENST00000396386 BOCQ9BWV1 1114 aa14.8□□□□□ -0.04
CBX3-202ENST00000396386 NUSAP1Q9BXS6 441 aaKnown RBP14.8□□□□□ -0.04
CBX3-202ENST00000396386 WDR41Q9HAD4 459 aa14.8□□□□□ -0.04
CBX3-202ENST00000396386 KIAA0100Q14667 2235 aaKnown RBP14.79□□□□□ -0.04
CBX3-202ENST00000396386 SORBS2O94875 1100 aaKnown RBP14.79□□□□□ -0.04
CBX3-202ENST00000396386 S100BP04271 92 aaPredicted RBP14.79□□□□□ -0.04
CBX3-202ENST00000396386 RPSAP08865 295 aaKnown RBP14.79□□□□□ -0.04
CBX3-202ENST00000396386 TYRP14679 529 aa14.79□□□□□ -0.04
CBX3-202ENST00000396386 EPCAMP16422 314 aa14.79□□□□□ -0.04
CBX3-202ENST00000396386 AGTR2P50052 363 aa14.79□□□□□ -0.04
CBX3-202ENST00000396386 HK3P52790 923 aa14.79□□□□□ -0.04
CBX3-202ENST00000396386 FOXA1P55317 472 aa14.79□□□□□ -0.04
CBX3-202ENST00000396386 ECT2LQ008S8 904 aa14.79□□□□□ -0.04
CBX3-202ENST00000396386 STX5Q13190 355 aa14.79□□□□□ -0.04
CBX3-202ENST00000396386 RBBP7Q16576 425 aa14.79□□□□□ -0.04
CBX3-202ENST00000396386 AGKQ53H12 422 aa14.79□□□□□ -0.04
CBX3-202ENST00000396386 PRSS36Q5K4E3 855 aa14.79□□□□□ -0.04
CBX3-202ENST00000396386 FAM219BQ5XKK7 198 aa14.79□□□□□ -0.04
CBX3-202ENST00000396386 CRTC1Q6UUV9 634 aa14.79□□□□□ -0.04
CBX3-202ENST00000396386 PPFIBP2Q8ND30 876 aa14.79□□□□□ -0.04
CBX3-202ENST00000396386 OR56A4Q8NGH8 313 aa14.79□□□□□ -0.04
CBX3-202ENST00000396386 HMGCLL1Q8TB92 370 aa14.79□□□□□ -0.04
CBX3-202ENST00000396386 VOPP1Q96AW1 172 aa14.79□□□□□ -0.04
CBX3-202ENST00000396386 CCDC97Q96F63 343 aaPredicted RBP14.79□□□□□ -0.04
CBX3-202ENST00000396386 SCRN2Q96FV2 425 aa14.79□□□□□ -0.04
CBX3-202ENST00000396386 C3orf30Q96M34 536 aa14.79□□□□□ -0.04
CBX3-202ENST00000396386 ZNF641Q96N77 438 aaPredicted RBP14.79□□□□□ -0.04
CBX3-202ENST00000396386 KCNA7Q96RP8 456 aa14.79□□□□□ -0.04
CBX3-202ENST00000396386 MCCC1Q96RQ3 725 aaPredicted RBP14.79□□□□□ -0.04
CBX3-202ENST00000396386 NPAS2Q99743 824 aa14.79□□□□□ -0.04
CBX3-202ENST00000396386 C17orf80Q9BSJ5 609 aa14.79□□□□□ -0.04
CBX3-202ENST00000396386 HTATIP2Q9BUP3 242 aa14.79□□□□□ -0.04
CBX3-202ENST00000396386 MRPL1Q9BYD6 325 aaKnown RBP14.79□□□□□ -0.04
CBX3-202ENST00000396386 CIPCQ9C0C6 399 aa14.79□□□□□ -0.04
CBX3-202ENST00000396386 S100A14Q9HCY8 104 aa14.79□□□□□ -0.04
CBX3-202ENST00000396386 NMRK1Q9NWW6 199 aa14.79□□□□□ -0.04
CBX3-202ENST00000396386 ZMYM5Q9UJ78 669 aa14.79□□□□□ -0.04
CBX3-202ENST00000396386 PPIL1Q9Y3C6 166 aa14.79□□□□□ -0.04
CBX3-202ENST00000396386 ATP6AP2A0A1C7CYW4 349 aa14.78□□□□□ -0.04
CBX3-202ENST00000396386 A0A1W2PQ67 120 aa14.78□□□□□ -0.04
CBX3-202ENST00000396386 LINC01553A4QN01 128 aa14.78□□□□□ -0.04
CBX3-202ENST00000396386 A8MX80 341 aa14.78□□□□□ -0.04
CBX3-202ENST00000396386 VPS4BO75351 444 aa14.78□□□□□ -0.04
CBX3-202ENST00000396386 ATP6AP2O75787 350 aa14.78□□□□□ -0.04
CBX3-202ENST00000396386 POP4O95707 220 aaKnown RBP14.78□□□□□ -0.04
CBX3-202ENST00000396386 CA5AP35218 305 aa14.78□□□□□ -0.04
CBX3-202ENST00000396386 ERFP50548 548 aa14.78□□□□□ -0.04
CBX3-202ENST00000396386 NTHL1P78549 312 aa14.78□□□□□ -0.04
CBX3-202ENST00000396386 TGFBIQ15582 683 aa14.78□□□□□ -0.04
CBX3-202ENST00000396386 CMPK2Q5EBM0 449 aa14.78□□□□□ -0.04
CBX3-202ENST00000396386 FBXO48Q5FWF7 155 aa14.78□□□□□ -0.04
CBX3-202ENST00000396386 LRRC66Q68CR7 880 aa14.78□□□□□ -0.04
CBX3-202ENST00000396386 DPY19L3Q6ZPD9 716 aa14.78□□□□□ -0.04
CBX3-202ENST00000396386 Q6ZVU0 165 aa14.78□□□□□ -0.04
CBX3-202ENST00000396386 MYO1HQ8N1T3 1032 aa14.78□□□□□ -0.04
CBX3-202ENST00000396386 NXPE1Q8N323 547 aa14.78□□□□□ -0.04
CBX3-202ENST00000396386 EFCAB3Q8N7B9 438 aa14.78□□□□□ -0.04
CBX3-202ENST00000396386 LKAAEAR1Q8TD35 194 aa14.78□□□□□ -0.04
CBX3-202ENST00000396386 NRG4Q8WWG1 115 aa14.78□□□□□ -0.04
CBX3-202ENST00000396386 OTUB2Q96DC9 234 aa14.78□□□□□ -0.04
CBX3-202ENST00000396386 ASIC4Q96FT7 647 aa14.78□□□□□ -0.04
CBX3-202ENST00000396386 AKTIPQ9H8T0 292 aa14.78□□□□□ -0.04
CBX3-202ENST00000396386 UTP6Q9NYH9 597 aaKnown RBP14.78□□□□□ -0.04
CBX3-202ENST00000396386 EIF2B4Q9UI10 523 aaKnown RBP14.78□□□□□ -0.04
CBX3-202ENST00000396386 LRRC42Q9Y546 428 aa14.78□□□□□ -0.04
CBX3-202ENST00000396386 GIPC1O14908 333 aa14.78□□□□□ -0.04
CBX3-202ENST00000396386 ESRRBO95718 433 aa14.78□□□□□ -0.04
CBX3-202ENST00000396386 CHEK2O96017 543 aa14.78□□□□□ -0.04
CBX3-202ENST00000396386 UGT2B4P06133 528 aa14.78□□□□□ -0.04
CBX3-202ENST00000396386 CHRM1P11229 460 aaPredicted RBP14.78□□□□□ -0.04
CBX3-202ENST00000396386 TCF3P15923 654 aa14.78□□□□□ -0.04
CBX3-202ENST00000396386 ITGB6P18564 788 aa14.78□□□□□ -0.04
CBX3-202ENST00000396386 UGT1A6P19224 532 aa14.78□□□□□ -0.04
CBX3-202ENST00000396386 UGT1A1P22309 533 aa14.78□□□□□ -0.04
CBX3-202ENST00000396386 UGT1A4P22310 534 aa14.78□□□□□ -0.04
CBX3-202ENST00000396386 UGT1A3P35503 534 aa14.78□□□□□ -0.04
CBX3-202ENST00000396386 UGT1A5P35504 534 aa14.78□□□□□ -0.04
CBX3-202ENST00000396386 IRS1P35568 1242 aa14.78□□□□□ -0.04
CBX3-202ENST00000396386 EML3Q32P44 896 aa14.78□□□□□ -0.04
CBX3-202ENST00000396386 MMEL1Q495T6 779 aa14.78□□□□□ -0.04
CBX3-202ENST00000396386 LY6G5CQ5SRR4 150 aa14.78□□□□□ -0.04
CBX3-202ENST00000396386 REP15Q6BDI9 236 aa14.78□□□□□ -0.04
CBX3-202ENST00000396386 MACC1Q6ZN28 852 aa14.78□□□□□ -0.04
CBX3-202ENST00000396386 GPR26Q8NDV2 337 aa14.78□□□□□ -0.04
CBX3-202ENST00000396386 SLC26A7Q8TE54 656 aa14.78□□□□□ -0.04
CBX3-202ENST00000396386 DNAJC9Q8WXX5 260 aa14.78□□□□□ -0.04
CBX3-202ENST00000396386 HGH1Q9BTY7 390 aa14.78□□□□□ -0.04
CBX3-202ENST00000396386 SLC25A23Q9BV35 468 aa14.78□□□□□ -0.04
CBX3-202ENST00000396386 TSR3Q9UJK0 312 aaKnown RBP14.78□□□□□ -0.04
CBX3-202ENST00000396386 PPM1HQ9ULR3 514 aa14.78□□□□□ -0.04
CBX3-202ENST00000396386 BTRCQ9Y297 605 aa14.78□□□□□ -0.04
CBX3-202ENST00000396386 PTGDR2Q9Y5Y4 395 aa14.78□□□□□ -0.04
CBX3-202ENST00000396386 PRSS21Q9Y6M0 314 aa14.78□□□□□ -0.04
CBX3-202ENST00000396386 RAD51BO15315 384 aa14.77□□□□□ -0.05
CBX3-202ENST00000396386 SNRPB2P08579 225 aaKnown RBP14.77□□□□□ -0.05
CBX3-202ENST00000396386 ALDOCP09972 364 aaKnown RBP14.77□□□□□ -0.05
CBX3-202ENST00000396386 LHCGRP22888 699 aa14.77□□□□□ -0.05
CBX3-202ENST00000396386 DGKAP23743 735 aa14.77□□□□□ -0.05
CBX3-202ENST00000396386 RECQLP46063 649 aaPredicted RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms