RNA–Protein interactions for RNA: ENST00000395980.6

BDNF-204, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-204ENST00000395980 FAM118AQ9NWS6 357 aa8.62□□□□□ -1.03
BDNF-204ENST00000395980 ZNF232Q9UNY5 417 aa8.62□□□□□ -1.03
BDNF-204ENST00000395980 PLXNB2O15031 1838 aa8.62□□□□□ -1.03
BDNF-204ENST00000395980 PATJQ8NI35 1801 aa8.62□□□□□ -1.03
BDNF-204ENST00000395980 LCHNA4D1U4 455 aa8.62□□□□□ -1.03
BDNF-204ENST00000395980 SLC22A1O15245 554 aa8.62□□□□□ -1.03
BDNF-204ENST00000395980 B4GAT1O43505 415 aa8.62□□□□□ -1.03
BDNF-204ENST00000395980 GABARAPO95166 117 aa8.62□□□□□ -1.03
BDNF-204ENST00000395980 NTRK1P04629 796 aa8.62□□□□□ -1.03
BDNF-204ENST00000395980 GGT1P19440 569 aa8.62□□□□□ -1.03
BDNF-204ENST00000395980 CD86P42081 329 aa8.62□□□□□ -1.03
BDNF-204ENST00000395980 UFM1P61960 85 aa8.62□□□□□ -1.03
BDNF-204ENST00000395980 SPCS2Q15005 226 aa8.62□□□□□ -1.03
BDNF-204ENST00000395980 ACOX1Q15067 660 aa8.62□□□□□ -1.03
BDNF-204ENST00000395980 KDELC2Q7Z4H8 507 aa8.62□□□□□ -1.03
BDNF-204ENST00000395980 STK32CQ86UX6 486 aa8.62□□□□□ -1.03
BDNF-204ENST00000395980 OR8J3Q8NGG0 315 aa8.62□□□□□ -1.03
BDNF-204ENST00000395980 OR52E4Q8NGH9 312 aa8.62□□□□□ -1.03
BDNF-204ENST00000395980 MYLPFQ96A32 169 aa8.62□□□□□ -1.03
BDNF-204ENST00000395980 TEX37Q96LM6 180 aa8.62□□□□□ -1.03
BDNF-204ENST00000395980 TMEM74Q96NL1 305 aa8.62□□□□□ -1.03
BDNF-204ENST00000395980 OSBPL10Q9BXB5 764 aa8.62□□□□□ -1.03
BDNF-204ENST00000395980 ELP3Q9H9T3 547 aa8.62□□□□□ -1.03
BDNF-204ENST00000395980 FBXO8Q9NRD0 319 aa8.62□□□□□ -1.03
BDNF-204ENST00000395980 HEBP1Q9NRV9 189 aa8.62□□□□□ -1.03
BDNF-204ENST00000395980 INTS7Q9NVH2 962 aaKnown RBP8.62□□□□□ -1.03
BDNF-204ENST00000395980 BAG5Q9UL15 447 aa8.62□□□□□ -1.03
BDNF-204ENST00000395980 GIT1Q9Y2X7 761 aa8.62□□□□□ -1.03
BDNF-204ENST00000395980 LOC285095A0A1B0GVY8 99 aa8.62□□□□□ -1.03
BDNF-204ENST00000395980 LRRC14BA6NHZ5 514 aa8.62□□□□□ -1.03
BDNF-204ENST00000395980 SUPT3HB4E1H0 165 aa8.62□□□□□ -1.03
BDNF-204ENST00000395980 E9PAM4 449 aa8.62□□□□□ -1.03
BDNF-204ENST00000395980 CD3EAPO15446 510 aaKnown RBP8.62□□□□□ -1.03
BDNF-204ENST00000395980 SLC4A1P02730 911 aa8.62□□□□□ -1.03
BDNF-204ENST00000395980 MMP2P08253 660 aa8.62□□□□□ -1.03
BDNF-204ENST00000395980 HTR1AP08908 422 aa8.62□□□□□ -1.03
BDNF-204ENST00000395980 CCDC159P0C7I6 412 aa8.62□□□□□ -1.03
BDNF-204ENST00000395980 SMIM10L2AP0DMW4 78 aa8.62□□□□□ -1.03
BDNF-204ENST00000395980 SMIM10L2BP0DMW5 78 aa8.62□□□□□ -1.03
BDNF-204ENST00000395980 HPCAL1P37235 193 aa8.62□□□□□ -1.03
BDNF-204ENST00000395980 PPP2R2BQ00005 443 aa8.62□□□□□ -1.03
BDNF-204ENST00000395980 TYSND1Q2T9J0 566 aa8.62□□□□□ -1.03
BDNF-204ENST00000395980 ZIK1Q3SY52 487 aaPredicted RBP8.62□□□□□ -1.03
BDNF-204ENST00000395980 FUT11Q495W5 492 aa8.62□□□□□ -1.03
BDNF-204ENST00000395980 TIGD2Q4W5G0 525 aa8.62□□□□□ -1.03
BDNF-204ENST00000395980 TMEM53Q6P2H8 277 aa8.62□□□□□ -1.03
BDNF-204ENST00000395980 LDB1Q86U70 411 aaPredicted RBP8.62□□□□□ -1.03
BDNF-204ENST00000395980 GALNT13Q8IUC8 556 aa8.62□□□□□ -1.03
BDNF-204ENST00000395980 SPNS2Q8IVW8 549 aa8.62□□□□□ -1.03
BDNF-204ENST00000395980 RYBPQ8N488 228 aaPredicted RBP8.62□□□□□ -1.03
BDNF-204ENST00000395980 DTWD1Q8N5C7 304 aa8.62□□□□□ -1.03
BDNF-204ENST00000395980 TEX26Q8N6G2 289 aa8.62□□□□□ -1.03
BDNF-204ENST00000395980 OR6J1Q8NGC5 347 aa8.62□□□□□ -1.03
BDNF-204ENST00000395980 PABPC5Q96DU9 382 aaKnown RBP8.62□□□□□ -1.03
BDNF-204ENST00000395980 RBM4BQ9BQ04 359 aaKnown RBP8.62□□□□□ -1.03
BDNF-204ENST00000395980 RBM4Q9BWF3 364 aaKnown RBP8.62□□□□□ -1.03
BDNF-204ENST00000395980 TRIM8Q9BZR9 551 aa8.62□□□□□ -1.03
BDNF-204ENST00000395980 GORASP2Q9H8Y8 452 aa8.62□□□□□ -1.03
BDNF-204ENST00000395980 NT5MQ9NPB1 228 aa8.62□□□□□ -1.03
BDNF-204ENST00000395980 NDFIP2Q9NV92 336 aa8.62□□□□□ -1.03
BDNF-204ENST00000395980 SMPD4Q9NXE4 827 aa8.62□□□□□ -1.03
BDNF-204ENST00000395980 WARS2Q9UGM6 360 aaKnown RBP8.62□□□□□ -1.03
BDNF-204ENST00000395980 CRYL1Q9Y2S2 319 aa8.62□□□□□ -1.03
BDNF-204ENST00000395980 POLR2AP24928 1970 aaKnown RBP8.61□□□□□ -1.03
BDNF-204ENST00000395980 GMNNO75496 209 aa8.61□□□□□ -1.03
BDNF-204ENST00000395980 RPP40O75818 363 aaKnown RBP8.61□□□□□ -1.03
BDNF-204ENST00000395980 KCNH1O95259 989 aa8.61□□□□□ -1.03
BDNF-204ENST00000395980 MT-ND1P03886 318 aa8.61□□□□□ -1.03
BDNF-204ENST00000395980 ATXN1LP0C7T5 689 aaKnown RBP8.61□□□□□ -1.03
BDNF-204ENST00000395980 MAPK10P53779 464 aa8.61□□□□□ -1.03
BDNF-204ENST00000395980 RFX4Q33E94 735 aa8.61□□□□□ -1.03
BDNF-204ENST00000395980 SIRPB2Q5JXA9 342 aa8.61□□□□□ -1.03
BDNF-204ENST00000395980 MARC1Q5VT66 337 aa8.61□□□□□ -1.03
BDNF-204ENST00000395980 DLEU7Q6UYE1 221 aa8.61□□□□□ -1.03
BDNF-204ENST00000395980 CHCHD4Q8N4Q1 142 aa8.61□□□□□ -1.03
BDNF-204ENST00000395980 TMEM40Q8WWA1 233 aa8.61□□□□□ -1.03
BDNF-204ENST00000395980 C1orf74Q96LT6 269 aa8.61□□□□□ -1.03
BDNF-204ENST00000395980 MBOAT4Q96T53 435 aa8.61□□□□□ -1.03
BDNF-204ENST00000395980 SLX1AQ9BQ83 275 aa8.61□□□□□ -1.03
BDNF-204ENST00000395980 NOL6Q9H6R4 1146 aaKnown RBP8.61□□□□□ -1.03
BDNF-204ENST00000395980 NECTIN3Q9NQS3 549 aa8.61□□□□□ -1.03
BDNF-204ENST00000395980 RNF112Q9ULX5 631 aa8.61□□□□□ -1.03
BDNF-204ENST00000395980 PCDHGA8Q9Y5G5 932 aa8.61□□□□□ -1.03
BDNF-204ENST00000395980 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.61□□□□□ -1.03
BDNF-204ENST00000395980 G3V2T6 193 aa8.61□□□□□ -1.03
BDNF-204ENST00000395980 JRKO75564 520 aa8.61□□□□□ -1.03
BDNF-204ENST00000395980 TCF3P15923 654 aa8.61□□□□□ -1.03
BDNF-204ENST00000395980 IL7RP16871 459 aa8.61□□□□□ -1.03
BDNF-204ENST00000395980 HLA-DPA1P20036 260 aa8.61□□□□□ -1.03
BDNF-204ENST00000395980 HTR1BP28222 390 aa8.61□□□□□ -1.03
BDNF-204ENST00000395980 MTHFRP42898 656 aa8.61□□□□□ -1.03
BDNF-204ENST00000395980 SERPINB10P48595 397 aa8.61□□□□□ -1.03
BDNF-204ENST00000395980 TPD52P55327 224 aaPredicted RBP8.61□□□□□ -1.03
BDNF-204ENST00000395980 CTF1Q16619 201 aa8.61□□□□□ -1.03
BDNF-204ENST00000395980 ZC3H12BQ5HYM0 836 aaKnown RBP8.61□□□□□ -1.03
BDNF-204ENST00000395980 SULT1C3Q6IMI6 304 aa8.61□□□□□ -1.03
BDNF-204ENST00000395980 FAM171BQ6P995 826 aa8.61□□□□□ -1.03
BDNF-204ENST00000395980 OR56A4Q8NGH8 313 aa8.61□□□□□ -1.03
BDNF-204ENST00000395980 SH3RF2Q8TEC5 729 aa8.61□□□□□ -1.03
BDNF-204ENST00000395980 CGREF1Q99674 301 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms