RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 GLYATQ6IB77 296 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 RBM23Q86U06 439 aaKnown RBP5.42□□□□□ -1.54
VPS13C-204ENST00000395898 GALNT13Q8IUC8 556 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 TTLQ8NG68 377 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 TMEM27Q9HBJ8 222 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 PLGRKTQ9HBL7 147 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 PNPLA8Q9NP80 782 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 GNEQ9Y223 722 aaKnown RBP5.42□□□□□ -1.54
VPS13C-204ENST00000395898 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.42□□□□□ -1.54
VPS13C-204ENST00000395898 ZMPSTE24O75844 475 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 PRDX6P30041 224 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 FUT10Q6P4F1 479 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 FLCNQ8NFG4 579 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 ADCY4Q8NFM4 1077 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 CLCC1Q96S66 551 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 NPAS2Q99743 824 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 GPN1Q9HCN4 374 aaPredicted RBP5.41□□□□□ -1.54
VPS13C-204ENST00000395898 PCDHGA11Q9Y5H2 935 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 SCN11AQ9UI33 1791 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 GON4LQ3T8J9 2241 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 DHX15O43143 795 aaKnown RBP5.41□□□□□ -1.54
VPS13C-204ENST00000395898 SEPT4O43236 478 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 CALCAP01258 141 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 ARFIP1P53367 373 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 C2orf80Q0P641 193 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 GTF2H2Q13888 395 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 DCST1Q5T197 706 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 GTF2H2CQ6P1K8 395 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 TDRPQ86YL5 185 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 SLC34A3Q8N130 599 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 LRRN4CLQ8ND94 238 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 SLC22A18Q96BI1 424 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 FUBP3Q96I24 572 aaKnown RBP eCLIP5.41□□□□□ -1.54
VPS13C-204ENST00000395898 FEM1CQ96JP0 617 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 CNPPD1Q9BV87 410 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 CCDC177Q9NQR7 707 aaPredicted RBP5.41□□□□□ -1.54
VPS13C-204ENST00000395898 NUP98P52948 1817 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 NPEPPSL1A6NEC2 478 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 RNASEH2AO75792 299 aaKnown RBP5.41□□□□□ -1.54
VPS13C-204ENST00000395898 TM7SF2O76062 418 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 UBXN7O94888 489 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 ALOX5P09917 674 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 RPS6KA3P51812 740 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 MAPK12P53778 367 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 CDH13P55290 713 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 CLNKQ7Z7G1 428 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 MPP5Q8N3R9 675 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 NATD1Q8N6N6 113 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 C4orf32Q8N8J7 132 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.41□□□□□ -1.54
VPS13C-204ENST00000395898 RBM18Q96H35 190 aaKnown RBP5.41□□□□□ -1.54
VPS13C-204ENST00000395898 CCDC28BQ9BUN5 200 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 CHID1Q9BWS9 393 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 SLC28A3Q9HAS3 691 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 DUS2Q9NX74 493 aaKnown RBP5.41□□□□□ -1.54
VPS13C-204ENST00000395898 KERAO60938 352 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 ENTPD5O75356 428 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 PTPN5P54829 565 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 JAM2P57087 298 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 GPR107Q5VW38 600 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 DRICH1Q6PGQ1 229 aaPredicted RBP5.41□□□□□ -1.54
VPS13C-204ENST00000395898 MEIOBQ8N635 442 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 NIPA2Q8N8Q9 360 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 TRPM4Q8TD43 1214 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 GPR152Q8TDT2 470 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 GPR88Q9GZN0 384 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 CFAP97Q9P2B7 532 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 AP4B1Q9Y6B7 739 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 RGPD5Q99666 1765 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 A0A0X1KG70 313 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 IDH3BO43837 385 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 FABP3P05413 133 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 PRPS2P11908 318 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 ARL2P36404 184 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 LCP2Q13094 533 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 HKDC1Q2TB90 917 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 FAAH2Q6GMR7 532 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 DNAJB7Q7Z6W7 309 aaPredicted RBP5.41□□□□□ -1.54
VPS13C-204ENST00000395898 DGCR14Q96DF8 476 aaKnown RBP5.41□□□□□ -1.54
VPS13C-204ENST00000395898 DEFB118Q96PH6 123 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 ZNF347Q96SE7 839 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 CHCHD6Q9BRQ6 235 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 RHOBTB2Q9BYZ6 727 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 TRIM2Q9C040 744 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 FBXW11Q9UKB1 542 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 AHCYL1O43865 530 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 PGM3O95394 542 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 GJB1P08034 283 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 GNAZP19086 355 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 HSD17B2P37059 387 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 TAF1AQ15573 450 aaPredicted RBP5.41□□□□□ -1.54
VPS13C-204ENST00000395898 GET4Q7L5D6 327 aaPredicted RBP5.41□□□□□ -1.54
VPS13C-204ENST00000395898 IQCKQ8N0W5 287 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 C11orf65Q8NCR3 313 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 OR6K2Q8NGY2 324 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 IL31RAQ8NI17 732 aa5.41□□□□□ -1.54
VPS13C-204ENST00000395898 ZBED6CLQ96FA7 236 aaPredicted RBP5.41□□□□□ -1.54
VPS13C-204ENST00000395898 NOL11Q9H8H0 719 aaKnown RBP5.41□□□□□ -1.54
VPS13C-204ENST00000395898 ZNF282Q9UDV7 671 aaPredicted RBP5.41□□□□□ -1.54
VPS13C-204ENST00000395898 CAMTA1Q9Y6Y1 1673 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms