RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 PRR23AA6NEV1 266 aa13.53□□□□□ -0.24
VAPB-202ENST00000395802 SRRM3A6NNA2 597 aaPredicted RBP13.53□□□□□ -0.24
VAPB-202ENST00000395802 FADS2P1A8MWK0 482 aa13.53□□□□□ -0.24
VAPB-202ENST00000395802 GPR39O43194 453 aa13.53□□□□□ -0.24
VAPB-202ENST00000395802 VEGFDO43915 354 aa13.53□□□□□ -0.24
VAPB-202ENST00000395802 SPAG7O75391 227 aa13.53□□□□□ -0.24
VAPB-202ENST00000395802 FTH1P02794 183 aa13.53□□□□□ -0.24
VAPB-202ENST00000395802 GSTM1P09488 218 aa13.53□□□□□ -0.24
VAPB-202ENST00000395802 CD6P30203 668 aa13.53□□□□□ -0.24
VAPB-202ENST00000395802 GSTM4Q03013 218 aa13.53□□□□□ -0.24
VAPB-202ENST00000395802 LRRC8EQ6NSJ5 796 aa13.53□□□□□ -0.24
VAPB-202ENST00000395802 ZNF549Q6P9A3 640 aa13.53□□□□□ -0.24
VAPB-202ENST00000395802 NKAPQ8N5F7 415 aaKnown RBP13.53□□□□□ -0.24
VAPB-202ENST00000395802 TCP10LQ8TDR4 215 aa13.53□□□□□ -0.24
VAPB-202ENST00000395802 HHIPQ96QV1 700 aa13.53□□□□□ -0.24
VAPB-202ENST00000395802 PCED1AQ9H1Q7 454 aa13.53□□□□□ -0.24
VAPB-202ENST00000395802 TRIM39Q9HCM9 518 aa13.53□□□□□ -0.24
VAPB-202ENST00000395802 SPATS2LQ9NUQ6 558 aaKnown RBP13.53□□□□□ -0.24
VAPB-202ENST00000395802 MID2Q9UJV3 735 aa13.53□□□□□ -0.24
VAPB-202ENST00000395802 ZFR2Q9UPR6 939 aaKnown RBP13.53□□□□□ -0.24
VAPB-202ENST00000395802 PLXNA2O75051 1894 aa13.53□□□□□ -0.24
VAPB-202ENST00000395802 TRIOO75962 3097 aa13.53□□□□□ -0.24
VAPB-202ENST00000395802 TRPM6Q9BX84 2022 aa13.53□□□□□ -0.24
VAPB-202ENST00000395802 TOR1BO14657 336 aa13.53□□□□□ -0.24
VAPB-202ENST00000395802 KLHL2O95198 593 aa13.53□□□□□ -0.24
VAPB-202ENST00000395802 SLC35E2BP0CK96 405 aa13.53□□□□□ -0.24
VAPB-202ENST00000395802 ACSL1P33121 698 aa13.53□□□□□ -0.24
VAPB-202ENST00000395802 CSRP3P50461 194 aa13.53□□□□□ -0.24
VAPB-202ENST00000395802 CCR5P51681 352 aa13.53□□□□□ -0.24
VAPB-202ENST00000395802 IL9RQ01113 521 aa13.53□□□□□ -0.24
VAPB-202ENST00000395802 TMEM115Q12893 351 aaPredicted RBP13.53□□□□□ -0.24
VAPB-202ENST00000395802 MTAPQ13126 283 aa13.53□□□□□ -0.24
VAPB-202ENST00000395802 WSCD2Q2TBF2 565 aa13.53□□□□□ -0.24
VAPB-202ENST00000395802 OTOAQ7RTW8 1153 aa13.53□□□□□ -0.24
VAPB-202ENST00000395802 DENND1AQ8TEH3 1009 aa13.53□□□□□ -0.24
VAPB-202ENST00000395802 DYDC1Q8WWB3 177 aa13.53□□□□□ -0.24
VAPB-202ENST00000395802 SREK1Q8WXA9 508 aaKnown RBP13.53□□□□□ -0.24
VAPB-202ENST00000395802 SPACA7Q96KW9 195 aa13.53□□□□□ -0.24
VAPB-202ENST00000395802 UHRF1Q96T88 793 aaPredicted RBP13.53□□□□□ -0.24
VAPB-202ENST00000395802 BOCQ9BWV1 1114 aa13.53□□□□□ -0.24
VAPB-202ENST00000395802 CCDC134Q9H6E4 229 aa13.53□□□□□ -0.24
VAPB-202ENST00000395802 WDR26Q9H7D7 661 aa13.53□□□□□ -0.24
VAPB-202ENST00000395802 CD320Q9NPF0 282 aa13.53□□□□□ -0.24
VAPB-202ENST00000395802 PHPT1Q9NRX4 125 aaPredicted RBP13.53□□□□□ -0.24
VAPB-202ENST00000395802 PLLPQ9Y342 182 aa13.53□□□□□ -0.24
VAPB-202ENST00000395802 OAS3Q9Y6K5 1087 aaKnown RBP13.53□□□□□ -0.24
VAPB-202ENST00000395802 KLHL33A6NCF5 533 aa13.52□□□□□ -0.25
VAPB-202ENST00000395802 FPGTO14772 594 aa13.52□□□□□ -0.25
VAPB-202ENST00000395802 PHGDHO43175 533 aaKnown RBP13.52□□□□□ -0.25
VAPB-202ENST00000395802 CDK14O94921 469 aa13.52□□□□□ -0.25
VAPB-202ENST00000395802 PCCBP05166 539 aa13.52□□□□□ -0.25
VAPB-202ENST00000395802 F7P08709 466 aaPredicted RBP13.52□□□□□ -0.25
VAPB-202ENST00000395802 LTA4HP09960 611 aaKnown RBP13.52□□□□□ -0.25
VAPB-202ENST00000395802 ZNF37AP17032 561 aaPredicted RBP13.52□□□□□ -0.25
VAPB-202ENST00000395802 HNRNPA2B1P22626 353 aaKnown RBP13.52□□□□□ -0.25
VAPB-202ENST00000395802 RPA3P35244 121 aaPredicted RBP13.52□□□□□ -0.25
VAPB-202ENST00000395802 TRIM23P36406 574 aa13.52□□□□□ -0.25
VAPB-202ENST00000395802 RGS4P49798 205 aa13.52□□□□□ -0.25
VAPB-202ENST00000395802 CDKN2DP55273 166 aa13.52□□□□□ -0.25
VAPB-202ENST00000395802 IL2P60568 153 aa13.52□□□□□ -0.25
VAPB-202ENST00000395802 CTSL3PQ5NE16 218 aa13.52□□□□□ -0.25
VAPB-202ENST00000395802 HHATQ5VTY9 493 aa13.52□□□□□ -0.25
VAPB-202ENST00000395802 CEP97Q8IW35 865 aa13.52□□□□□ -0.25
VAPB-202ENST00000395802 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.52□□□□□ -0.25
VAPB-202ENST00000395802 ANKRD42Q8N9B4 389 aa13.52□□□□□ -0.25
VAPB-202ENST00000395802 TP53I13Q8NBR0 393 aaPredicted RBP13.52□□□□□ -0.25
VAPB-202ENST00000395802 FAM174AQ8TBP5 190 aa13.52□□□□□ -0.25
VAPB-202ENST00000395802 INPP5DQ92835 1189 aa13.52□□□□□ -0.25
VAPB-202ENST00000395802 TOE1Q96GM8 510 aaKnown RBP13.52□□□□□ -0.25
VAPB-202ENST00000395802 OLFM1Q99784 485 aa13.52□□□□□ -0.25
VAPB-202ENST00000395802 NMRAL1Q9HBL8 299 aa13.52□□□□□ -0.25
VAPB-202ENST00000395802 LATS2Q9NRM7 1088 aa13.52□□□□□ -0.25
VAPB-202ENST00000395802 WSB2Q9NYS7 404 aaPredicted RBP13.52□□□□□ -0.25
VAPB-202ENST00000395802 CYP8B1Q9UNU6 501 aa13.52□□□□□ -0.25
VAPB-202ENST00000395802 GPR34Q9UPC5 381 aa13.52□□□□□ -0.25
VAPB-202ENST00000395802 DMTF1Q9Y222 760 aa13.52□□□□□ -0.25
VAPB-202ENST00000395802 EIF3FO00303 357 aaPredicted RBP13.51□□□□□ -0.25
VAPB-202ENST00000395802 CACNB4O00305 520 aaPredicted RBP13.51□□□□□ -0.25
VAPB-202ENST00000395802 INPP4BO15327 924 aa13.51□□□□□ -0.25
VAPB-202ENST00000395802 NDUFS2O75306 463 aa13.51□□□□□ -0.25
VAPB-202ENST00000395802 TRIM16O95361 564 aa13.51□□□□□ -0.25
VAPB-202ENST00000395802 SOD1P00441 154 aa13.51□□□□□ -0.25
VAPB-202ENST00000395802 DCNP07585 359 aaKnown RBP13.51□□□□□ -0.25
VAPB-202ENST00000395802 RBP1P09455 135 aa13.51□□□□□ -0.25
VAPB-202ENST00000395802 CCDC166P0CW27 439 aa13.51□□□□□ -0.25
VAPB-202ENST00000395802 AOC1P19801 751 aa13.51□□□□□ -0.25
VAPB-202ENST00000395802 DGKAP23743 735 aa13.51□□□□□ -0.25
VAPB-202ENST00000395802 AKT2P31751 481 aa13.51□□□□□ -0.25
VAPB-202ENST00000395802 ATP6V0D1P61421 351 aa13.51□□□□□ -0.25
VAPB-202ENST00000395802 CDK3Q00526 305 aa13.51□□□□□ -0.25
VAPB-202ENST00000395802 ACAP2Q15057 778 aa13.51□□□□□ -0.25
VAPB-202ENST00000395802 PPM1JQ5JR12 505 aa13.51□□□□□ -0.25
VAPB-202ENST00000395802 CLEC14AQ86T13 490 aa13.51□□□□□ -0.25
VAPB-202ENST00000395802 CLDN19Q8N6F1 224 aa13.51□□□□□ -0.25
VAPB-202ENST00000395802 CCDC63Q8NA47 563 aa13.51□□□□□ -0.25
VAPB-202ENST00000395802 ACVR1CQ8NER5 493 aa13.51□□□□□ -0.25
VAPB-202ENST00000395802 MGARPQ8TDB4 240 aa13.51□□□□□ -0.25
VAPB-202ENST00000395802 UBXN10Q96LJ8 280 aa13.51□□□□□ -0.25
VAPB-202ENST00000395802 GPR21Q99679 349 aa13.51□□□□□ -0.25
VAPB-202ENST00000395802 TEX101Q9BY14 249 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms