RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 HOXB3P14651 431 aaPredicted RBP13.56□□□□□ -0.24
CXCL12-205ENST00000395794 ZNF7P17097 686 aaPredicted RBP13.56□□□□□ -0.24
CXCL12-205ENST00000395794 CDC25BP30305 580 aa13.56□□□□□ -0.24
CXCL12-205ENST00000395794 MAPK9P45984 424 aa13.56□□□□□ -0.24
CXCL12-205ENST00000395794 CLCNKAP51800 687 aa13.56□□□□□ -0.24
CXCL12-205ENST00000395794 TMEM115Q12893 351 aaPredicted RBP13.56□□□□□ -0.24
CXCL12-205ENST00000395794 ITGA9Q13797 1035 aa13.56□□□□□ -0.24
CXCL12-205ENST00000395794 C16orf72Q14CZ0 275 aa13.56□□□□□ -0.24
CXCL12-205ENST00000395794 PLA2G4EQ3MJ16 856 aa13.56□□□□□ -0.24
CXCL12-205ENST00000395794 ATP13A5Q4VNC0 1218 aa13.56□□□□□ -0.24
CXCL12-205ENST00000395794 ANKRD20A2Q5SQ80 823 aa13.56□□□□□ -0.24
CXCL12-205ENST00000395794 LDLRAP1Q5SW96 308 aa13.56□□□□□ -0.24
CXCL12-205ENST00000395794 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.56□□□□□ -0.24
CXCL12-205ENST00000395794 ANKRD20A1Q5TYW2 823 aa13.56□□□□□ -0.24
CXCL12-205ENST00000395794 ANKRD20A3Q5VUR7 823 aa13.56□□□□□ -0.24
CXCL12-205ENST00000395794 ZNF574Q6ZN55 896 aaPredicted RBP13.56□□□□□ -0.24
CXCL12-205ENST00000395794 ZNF761Q86XN6 746 aaPredicted RBP13.56□□□□□ -0.24
CXCL12-205ENST00000395794 TRAPPC5Q8IUR0 188 aa13.56□□□□□ -0.24
CXCL12-205ENST00000395794 TTC30BQ8N4P2 665 aa13.56□□□□□ -0.24
CXCL12-205ENST00000395794 LRRC57Q8N9N7 239 aa13.56□□□□□ -0.24
CXCL12-205ENST00000395794 RCBTB1Q8NDN9 531 aa13.56□□□□□ -0.24
CXCL12-205ENST00000395794 DTX3LQ8TDB6 740 aa13.56□□□□□ -0.24
CXCL12-205ENST00000395794 USP7Q93009 1102 aa13.56□□□□□ -0.24
CXCL12-205ENST00000395794 CCNL2Q96S94 520 aaPredicted RBP13.56□□□□□ -0.24
CXCL12-205ENST00000395794 TIMM29Q9BSF4 260 aa13.56□□□□□ -0.24
CXCL12-205ENST00000395794 FICDQ9BVA6 458 aa13.56□□□□□ -0.24
CXCL12-205ENST00000395794 B3GNT4Q9C0J1 378 aa13.56□□□□□ -0.24
CXCL12-205ENST00000395794 EPB41L1Q9H4G0 881 aa13.56□□□□□ -0.24
CXCL12-205ENST00000395794 PRDM8Q9NQV8 689 aa13.56□□□□□ -0.24
CXCL12-205ENST00000395794 IL17CQ9P0M4 197 aa13.56□□□□□ -0.24
CXCL12-205ENST00000395794 CPNE7Q9UBL6 633 aa13.56□□□□□ -0.24
CXCL12-205ENST00000395794 ACSL6Q9UKU0 697 aa13.56□□□□□ -0.24
CXCL12-205ENST00000395794 DNAJC16Q9Y2G8 782 aa13.56□□□□□ -0.24
CXCL12-205ENST00000395794 ADGRG1Q9Y653 693 aa13.56□□□□□ -0.24
CXCL12-205ENST00000395794 ZFYVE26Q68DK2 2539 aa13.56□□□□□ -0.24
CXCL12-205ENST00000395794 PRAMEF33A0A0G2JMD5 474 aa13.55□□□□□ -0.24
CXCL12-205ENST00000395794 PRAMEF10O60809 474 aa13.55□□□□□ -0.24
CXCL12-205ENST00000395794 KCNJ13O60928 360 aa13.55□□□□□ -0.24
CXCL12-205ENST00000395794 VIPP01282 170 aa13.55□□□□□ -0.24
CXCL12-205ENST00000395794 LIPCP11150 499 aa13.55□□□□□ -0.24
CXCL12-205ENST00000395794 IDSP22304 550 aa13.55□□□□□ -0.24
CXCL12-205ENST00000395794 MPSTP25325 297 aa13.55□□□□□ -0.24
CXCL12-205ENST00000395794 CD82P27701 267 aa13.55□□□□□ -0.24
CXCL12-205ENST00000395794 EPHA4P54764 986 aa13.55□□□□□ -0.24
CXCL12-205ENST00000395794 PDE1BQ01064 536 aa13.55□□□□□ -0.24
CXCL12-205ENST00000395794 RHDQ02161 417 aa13.55□□□□□ -0.24
CXCL12-205ENST00000395794 CLN3Q13286 438 aa13.55□□□□□ -0.24
CXCL12-205ENST00000395794 CHRNA6Q15825 494 aa13.55□□□□□ -0.24
CXCL12-205ENST00000395794 SNAP47Q5SQN1 464 aa13.55□□□□□ -0.24
CXCL12-205ENST00000395794 WDR74Q6RFH5 385 aaPredicted RBP13.55□□□□□ -0.24
CXCL12-205ENST00000395794 FAM151BQ6UXP7 276 aa13.55□□□□□ -0.24
CXCL12-205ENST00000395794 LSM14AQ8ND56 463 aaKnown RBP13.55□□□□□ -0.24
CXCL12-205ENST00000395794 NCSTNQ92542 709 aa13.55□□□□□ -0.24
CXCL12-205ENST00000395794 ALG3Q92685 438 aa13.55□□□□□ -0.24
CXCL12-205ENST00000395794 SPATA13Q96N96 652 aa13.55□□□□□ -0.24
CXCL12-205ENST00000395794 FAM118BQ9BPY3 351 aa13.55□□□□□ -0.24
CXCL12-205ENST00000395794 DESI2Q9BSY9 194 aa13.55□□□□□ -0.24
CXCL12-205ENST00000395794 COL27A1Q8IZC6 1860 aaPredicted RBP13.55□□□□□ -0.24
CXCL12-205ENST00000395794 A6NCN8 305 aa13.54□□□□□ -0.24
CXCL12-205ENST00000395794 C5orf60A6NFR6 353 aa13.54□□□□□ -0.24
CXCL12-205ENST00000395794 TK2O00142 265 aa13.54□□□□□ -0.24
CXCL12-205ENST00000395794 ATXN7O15265 892 aaPredicted RBP13.54□□□□□ -0.24
CXCL12-205ENST00000395794 BUD23O43709 281 aaKnown RBP13.54□□□□□ -0.24
CXCL12-205ENST00000395794 CRTAMO95727 393 aa13.54□□□□□ -0.24
CXCL12-205ENST00000395794 THRAP10827 490 aa13.54□□□□□ -0.24
CXCL12-205ENST00000395794 CCL4P13236 92 aa13.54□□□□□ -0.24
CXCL12-205ENST00000395794 XRCC1P18887 633 aaPredicted RBP13.54□□□□□ -0.24
CXCL12-205ENST00000395794 LPOP22079 712 aaPredicted RBP13.54□□□□□ -0.24
CXCL12-205ENST00000395794 PSMB4P28070 264 aa13.54□□□□□ -0.24
CXCL12-205ENST00000395794 AKT1P31749 480 aa13.54□□□□□ -0.24
CXCL12-205ENST00000395794 CSF2RBP32927 897 aa13.54□□□□□ -0.24
CXCL12-205ENST00000395794 HALP42357 657 aa13.54□□□□□ -0.24
CXCL12-205ENST00000395794 TAF1AQ15573 450 aaPredicted RBP13.54□□□□□ -0.24
CXCL12-205ENST00000395794 SEPT7Q16181 437 aaKnown RBP13.54□□□□□ -0.24
CXCL12-205ENST00000395794 TAF1BQ53T94 588 aaPredicted RBP13.54□□□□□ -0.24
CXCL12-205ENST00000395794 ARHGEF18Q6ZSZ5 1173 aa13.54□□□□□ -0.24
CXCL12-205ENST00000395794 FAM129CQ86XR2 697 aa13.54□□□□□ -0.24
CXCL12-205ENST00000395794 RNF10Q8N5U6 811 aaKnown RBP13.54□□□□□ -0.24
CXCL12-205ENST00000395794 CCDC110Q8TBZ0 833 aa13.54□□□□□ -0.24
CXCL12-205ENST00000395794 ZNF398Q8TD17 642 aa13.54□□□□□ -0.24
CXCL12-205ENST00000395794 TAAR9Q96RI9 348 aa13.54□□□□□ -0.24
CXCL12-205ENST00000395794 ASPSCR1Q9BZE9 553 aa13.54□□□□□ -0.24
CXCL12-205ENST00000395794 TSGA10Q9BZW7 698 aa13.54□□□□□ -0.24
CXCL12-205ENST00000395794 SLC23A2Q9UGH3 650 aa13.54□□□□□ -0.24
CXCL12-205ENST00000395794 A8MU76 341 aa13.53□□□□□ -0.24
CXCL12-205ENST00000395794 ERVH48-1M5A8F1 160 aa13.53□□□□□ -0.24
CXCL12-205ENST00000395794 UGT1A9O60656 530 aa13.53□□□□□ -0.24
CXCL12-205ENST00000395794 PRAMEF1O95521 474 aa13.53□□□□□ -0.24
CXCL12-205ENST00000395794 FTCDO95954 541 aa13.53□□□□□ -0.24
CXCL12-205ENST00000395794 UGT1A6P19224 532 aa13.53□□□□□ -0.24
CXCL12-205ENST00000395794 MSH3P20585 1137 aa13.53□□□□□ -0.24
CXCL12-205ENST00000395794 UGT1A1P22309 533 aa13.53□□□□□ -0.24
CXCL12-205ENST00000395794 UGT1A4P22310 534 aa13.53□□□□□ -0.24
CXCL12-205ENST00000395794 UGT1A3P35503 534 aa13.53□□□□□ -0.24
CXCL12-205ENST00000395794 ETV5P41161 510 aa13.53□□□□□ -0.24
CXCL12-205ENST00000395794 RAB15P59190 212 aa13.53□□□□□ -0.24
CXCL12-205ENST00000395794 LONRF2Q1L5Z9 754 aa13.53□□□□□ -0.24
CXCL12-205ENST00000395794 MANEAQ5SRI9 462 aa13.53□□□□□ -0.24
CXCL12-205ENST00000395794 DCAF12Q5T6F0 453 aa13.53□□□□□ -0.24
CXCL12-205ENST00000395794 AADACL2Q6P093 401 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms