RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 GBE1Q04446 702 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 SLC20A2Q08357 652 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 GPM6BQ13491 265 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 GTF2H2Q13888 395 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 GTF2H2CQ6P1K8 395 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 MON1BQ7L1V2 547 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 ATCAYQ86WG3 371 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 PTPN18Q99952 460 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 MAF1Q9H063 256 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 RNPEPL1Q9HAU8 725 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 ABCB8Q9NUT2 735 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 MATN3O15232 486 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 BMP6P22004 513 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 TTKP33981 857 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 AVPR1BP47901 424 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 HSPA7P48741 367 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 MPP1Q00013 466 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 GRB14Q14449 540 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 ACAP2Q15057 778 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 KCTD19Q17RG1 926 aaPredicted RBP10.31□□□□□ -0.76
COL4A6-203ENST00000394872 FBXO15Q8NCQ5 510 aaPredicted RBP10.31□□□□□ -0.76
COL4A6-203ENST00000394872 OR2T12Q8NG77 320 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 AP3S1Q92572 193 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 TBATAQ96M53 351 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 FCRL4Q96PJ5 515 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 TBC1D10AQ9BXI6 508 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 SIRPGQ9P1W8 387 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 SLC17A7Q9P2U7 560 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 TCAF1Q9Y4C2 921 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 IRGMA1A4Y4 181 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 SEC24AO95486 1093 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 AP2A1O95782 977 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 SLC26A3P40879 764 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 SLC7A2P52569 658 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 AP1S1P61966 158 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 PARP8Q8N3A8 854 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 SLC4A11Q8NBS3 891 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 PIK3C3Q8NEB9 887 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 TWIST2Q8WVJ9 160 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 FGFBP2Q9BYJ0 223 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 SLC25A51Q9H1U9 297 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.3□□□□□ -0.76
COL4A6-203ENST00000394872 STX16-NPEPL1H3BU86 382 aa10.3□□□□□ -0.76
COL4A6-203ENST00000394872 STX16O14662 325 aa10.3□□□□□ -0.76
COL4A6-203ENST00000394872 CA12O43570 354 aa10.3□□□□□ -0.76
COL4A6-203ENST00000394872 LRIG2O94898 1065 aa10.3□□□□□ -0.76
COL4A6-203ENST00000394872 GOT2P00505 430 aaKnown RBP10.3□□□□□ -0.76
COL4A6-203ENST00000394872 BPGMP07738 259 aa10.3□□□□□ -0.76
COL4A6-203ENST00000394872 CRHR1P34998 444 aa10.3□□□□□ -0.76
COL4A6-203ENST00000394872 ARFIP1P53367 373 aa10.3□□□□□ -0.76
COL4A6-203ENST00000394872 PYROXD2Q8N2H3 581 aa10.3□□□□□ -0.76
COL4A6-203ENST00000394872 PLD5Q8N7P1 536 aa10.3□□□□□ -0.76
COL4A6-203ENST00000394872 DBF4BQ8NFT6 615 aa10.3□□□□□ -0.76
COL4A6-203ENST00000394872 SPATA22Q8NHS9 363 aa10.3□□□□□ -0.76
COL4A6-203ENST00000394872 FAM192AQ9GZU8 254 aa10.3□□□□□ -0.76
COL4A6-203ENST00000394872 IPPKQ9H8X2 491 aa10.3□□□□□ -0.76
COL4A6-203ENST00000394872 MCUBQ9NWR8 336 aa10.3□□□□□ -0.76
COL4A6-203ENST00000394872 ZNF222Q9UK12 451 aa10.3□□□□□ -0.76
COL4A6-203ENST00000394872 IKZF2Q9UKS7 526 aa10.3□□□□□ -0.76
COL4A6-203ENST00000394872 PCDHGC3Q9UN70 934 aa10.3□□□□□ -0.76
COL4A6-203ENST00000394872 TIMM22Q9Y584 194 aa10.3□□□□□ -0.76
COL4A6-203ENST00000394872 HEBP2Q9Y5Z4 205 aa10.3□□□□□ -0.76
COL4A6-203ENST00000394872 GPC6Q9Y625 555 aaPredicted RBP10.3□□□□□ -0.76
COL4A6-203ENST00000394872 TRAFD1O14545 582 aaPredicted RBP10.3□□□□□ -0.76
COL4A6-203ENST00000394872 TNFRSF21O75509 655 aa10.3□□□□□ -0.76
COL4A6-203ENST00000394872 C2P06681 752 aa10.3□□□□□ -0.76
COL4A6-203ENST00000394872 ANXA4P09525 319 aaPredicted RBP10.3□□□□□ -0.76
COL4A6-203ENST00000394872 LAMP2P13473 410 aa10.3□□□□□ -0.76
COL4A6-203ENST00000394872 KIR3DL1P43629 444 aa10.3□□□□□ -0.76
COL4A6-203ENST00000394872 ZBTB6Q15916 424 aa10.3□□□□□ -0.76
COL4A6-203ENST00000394872 KCTD21Q4G0X4 260 aa10.3□□□□□ -0.76
COL4A6-203ENST00000394872 TDRD1Q9BXT4 1180 aaKnown RBP10.3□□□□□ -0.76
COL4A6-203ENST00000394872 RASSF1Q9NS23 344 aa10.3□□□□□ -0.76
COL4A6-203ENST00000394872 PRPF19Q9UMS4 504 aaKnown RBP10.3□□□□□ -0.76
COL4A6-203ENST00000394872 MYBPHLA2RUH7 354 aa10.3□□□□□ -0.76
COL4A6-203ENST00000394872 TM7SF2O76062 418 aa10.3□□□□□ -0.76
COL4A6-203ENST00000394872 NUDT17P0C025 328 aa10.3□□□□□ -0.76
COL4A6-203ENST00000394872 TGFBR2P37173 567 aa10.3□□□□□ -0.76
COL4A6-203ENST00000394872 TBC1D25Q3MII6 688 aa10.3□□□□□ -0.76
COL4A6-203ENST00000394872 PLEKHG4Q58EX7 1191 aa10.3□□□□□ -0.76
COL4A6-203ENST00000394872 ATXN7L2Q5T6C5 722 aaPredicted RBP10.3□□□□□ -0.76
COL4A6-203ENST00000394872 PRR23BQ6ZRT6 265 aa10.3□□□□□ -0.76
COL4A6-203ENST00000394872 CDH24Q86UP0 819 aa10.3□□□□□ -0.76
COL4A6-203ENST00000394872 ZHX1-C8orf76Q96EF9 292 aa10.3□□□□□ -0.76
COL4A6-203ENST00000394872 HOPXQ9BPY8 73 aaPredicted RBP10.3□□□□□ -0.76
COL4A6-203ENST00000394872 DHX33Q9H6R0 707 aaKnown RBP10.3□□□□□ -0.76
COL4A6-203ENST00000394872 ACSS2Q9NR19 701 aa10.3□□□□□ -0.76
COL4A6-203ENST00000394872 HCN3Q9P1Z3 774 aa10.3□□□□□ -0.76
COL4A6-203ENST00000394872 COL20A1Q9P218 1284 aa10.3□□□□□ -0.76
COL4A6-203ENST00000394872 GRIN2DO15399 1336 aa10.3□□□□□ -0.76
COL4A6-203ENST00000394872 WNT7AO00755 349 aa10.3□□□□□ -0.76
COL4A6-203ENST00000394872 RBMXL2O75526 392 aaKnown RBP10.3□□□□□ -0.76
COL4A6-203ENST00000394872 SNHG28P0DPA3 235 aa10.3□□□□□ -0.76
COL4A6-203ENST00000394872 STXBP1P61764 594 aaKnown RBP10.3□□□□□ -0.76
COL4A6-203ENST00000394872 ZNF662Q6ZS27 426 aa10.3□□□□□ -0.76
COL4A6-203ENST00000394872 SNX20Q7Z614 316 aa10.3□□□□□ -0.76
COL4A6-203ENST00000394872 CLCC1Q96S66 551 aa10.3□□□□□ -0.76
COL4A6-203ENST00000394872 RTKNQ9BST9 563 aa10.3□□□□□ -0.76
COL4A6-203ENST00000394872 U3KQV3 271 aa10.3□□□□□ -0.76
COL4A6-203ENST00000394872 MROH1Q8NDA8 1641 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms